RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 FAM236AA0A1B0GUQ0 79 aa7.59□□□□□ -1.2
HLA-DMB-258ENST00000418107 FAM236BA0A1B0GV22 79 aa7.59□□□□□ -1.2
HLA-DMB-258ENST00000418107 SPINK1P00995 79 aa7.59□□□□□ -1.2
HLA-DMB-258ENST00000418107 SPAG11AQ6PDA7 123 aa7.59□□□□□ -1.2
HLA-DMB-258ENST00000418107 NDUFB1O75438 58 aa7.58□□□□□ -1.2
HLA-DMB-258ENST00000418107 DSCR10P59022 87 aa7.58□□□□□ -1.2
HLA-DMB-258ENST00000418107 K7EQZ3 153 aa7.56□□□□□ -1.2
HLA-DMB-258ENST00000418107 Q96NJ1 140 aa7.56□□□□□ -1.2
HLA-DMB-258ENST00000418107 A8MWP4 228 aa7.55□□□□□ -1.2
HLA-DMB-258ENST00000418107 KRTAP9-2Q9BYQ4 174 aa7.55□□□□□ -1.2
HLA-DMB-258ENST00000418107 ASB16-AS1Q495Z4 193 aa7.54□□□□□ -1.2
HLA-DMB-258ENST00000418107 Q5XG85 94 aa7.53□□□□□ -1.2
HLA-DMB-258ENST00000418107 PRR15Q8IV56 129 aa7.52□□□□□ -1.21
HLA-DMB-258ENST00000418107 FAT4Q6V0I7 4981 aa7.51□□□□□ -1.21
HLA-DMB-258ENST00000418107 PRR4Q16378 134 aa7.51□□□□□ -1.21
HLA-DMB-258ENST00000418107 C1orf195Q5TG92 126 aa7.5□□□□□ -1.21
HLA-DMB-258ENST00000418107 IGHV6-1A0A0B4J1U7 121 aa7.49□□□□□ -1.21
HLA-DMB-258ENST00000418107 ATOX1O00244 68 aa7.49□□□□□ -1.21
HLA-DMB-258ENST00000418107 RPS29P62273 56 aaKnown RBP7.49□□□□□ -1.21
HLA-DMB-258ENST00000418107 ANAPC13Q9BS18 74 aa7.49□□□□□ -1.21
HLA-DMB-258ENST00000418107 A0A1B0GVX0 72 aa7.48□□□□□ -1.21
HLA-DMB-258ENST00000418107 HCG22E2RYF7 251 aa7.48□□□□□ -1.21
HLA-DMB-258ENST00000418107 A0A0U1RQV1 116 aa7.47□□□□□ -1.21
HLA-DMB-258ENST00000418107 WFDC13Q8IUB5 93 aa7.47□□□□□ -1.21
HLA-DMB-258ENST00000418107 PCP4P48539 62 aa7.46□□□□□ -1.21
HLA-DMB-258ENST00000418107 CASC2Q6XLA1 102 aa7.45□□□□□ -1.22
HLA-DMB-258ENST00000418107 C8orf17Q9NRJ1 99 aa7.44□□□□□ -1.22
HLA-DMB-258ENST00000418107 SMIM20Q8N5G0 67 aa7.42□□□□□ -1.22
HLA-DMB-258ENST00000418107 MMP24-AS1A0A0U1RRL7 71 aa7.41□□□□□ -1.22
HLA-DMB-258ENST00000418107 hDV103S1A0JD37 113 aa7.41□□□□□ -1.22
HLA-DMB-258ENST00000418107 C8orf87E5RJ46 101 aa7.41□□□□□ -1.22
HLA-DMB-258ENST00000418107 LCE2AQ5TA79 106 aaPredicted RBP7.41□□□□□ -1.22
HLA-DMB-258ENST00000418107 KRTAP9-6A0A140TA67 174 aa7.4□□□□□ -1.22
HLA-DMB-258ENST00000418107 LINC00313P59037 77 aa7.4□□□□□ -1.22
HLA-DMB-258ENST00000418107 MUC17Q685J3 4493 aa7.39□□□□□ -1.23
HLA-DMB-258ENST00000418107 TRAV7A0A075B6U4 112 aa7.38□□□□□ -1.23
HLA-DMB-258ENST00000418107 SERP2Q8N6R1 65 aa7.38□□□□□ -1.23
HLA-DMB-258ENST00000418107 RETNLBQ9BQ08 111 aa7.38□□□□□ -1.23
HLA-DMB-258ENST00000418107 NDUFS5O43920 106 aa7.36□□□□□ -1.23
HLA-DMB-258ENST00000418107 NOTCH2NLQ7Z3S9 236 aa7.36□□□□□ -1.23
HLA-DMB-258ENST00000418107 TMEM254Q8TBM7 123 aa7.36□□□□□ -1.23
HLA-DMB-258ENST00000418107 COX7CP15954 63 aa7.34□□□□□ -1.23
HLA-DMB-258ENST00000418107 MRPL34Q9BQ48 92 aaKnown RBP7.34□□□□□ -1.23
HLA-DMB-258ENST00000418107 OCR1Q9BZK8 76 aa7.33□□□□□ -1.24
HLA-DMB-258ENST00000418107 UQCRQO14949 82 aa7.32□□□□□ -1.24
HLA-DMB-258ENST00000418107 CCDC179H3BU77 68 aa7.3□□□□□ -1.24
HLA-DMB-258ENST00000418107 TP53AIP1Q9HCN2 124 aa7.29□□□□□ -1.24
HLA-DMB-258ENST00000418107 C9orf92A6NGG3 77 aa7.28□□□□□ -1.24
HLA-DMB-258ENST00000418107 FP248Q71RG6 208 aaPredicted RBP7.27□□□□□ -1.25
HLA-DMB-258ENST00000418107 IGLV7-46A0A075B6I9 117 aa7.25□□□□□ -1.25
HLA-DMB-258ENST00000418107 MP68P56378 58 aa7.25□□□□□ -1.25
HLA-DMB-258ENST00000418107 C5orf47Q569G3 176 aa7.25□□□□□ -1.25
HLA-DMB-258ENST00000418107 C20orf197Q8N268 126 aa7.25□□□□□ -1.25
HLA-DMB-258ENST00000418107 H0Y9P7 68 aa7.23□□□□□ -1.25
HLA-DMB-258ENST00000418107 KRTAP16-1A8MUX0 517 aa7.22□□□□□ -1.25
HLA-DMB-258ENST00000418107 TPRXLQ17RH7 258 aa7.22□□□□□ -1.25
HLA-DMB-258ENST00000418107 SNURFQ9Y675 71 aa7.21□□□□□ -1.25
HLA-DMB-258ENST00000418107 TRAV22A0A0B4J277 110 aa7.2□□□□□ -1.26
HLA-DMB-258ENST00000418107 Q8N9P0 234 aaPredicted RBP7.2□□□□□ -1.26
HLA-DMB-258ENST00000418107 LINC00208Q96KT6 92 aa7.19□□□□□ -1.26
HLA-DMB-258ENST00000418107 H3BPC8 53 aa7.16□□□□□ -1.26
HLA-DMB-258ENST00000418107 KLKP1Q107X0 134 aa7.15□□□□□ -1.26
HLA-DMB-258ENST00000418107 C1orf64Q8NEQ6 169 aa7.15□□□□□ -1.26
HLA-DMB-258ENST00000418107 FSIP2Q5CZC0 6907 aa7.13□□□□□ -1.27
HLA-DMB-258ENST00000418107 A8MUU9 505 aa7.13□□□□□ -1.27
HLA-DMB-258ENST00000418107 Q5W150 140 aa7.13□□□□□ -1.27
HLA-DMB-258ENST00000418107 C20orf166-AS1Q96NR2 134 aa7.13□□□□□ -1.27
HLA-DMB-258ENST00000418107 KRTAP13-3Q3SY46 172 aa7.12□□□□□ -1.27
HLA-DMB-258ENST00000418107 NDUFC1O43677 76 aa7.11□□□□□ -1.27
HLA-DMB-258ENST00000418107 LCE2DQ5TA82 110 aaPredicted RBP7.1□□□□□ -1.27
HLA-DMB-258ENST00000418107 ZCCHC13Q8WW36 166 aaKnown RBP7.1□□□□□ -1.27
HLA-DMB-258ENST00000418107 CYSTM1Q9H1C7 97 aa7.1□□□□□ -1.27
HLA-DMB-258ENST00000418107 LOC101927531A0A1B0GV80 90 aa7.08□□□□□ -1.28
HLA-DMB-258ENST00000418107 Q75L30 129 aa7.08□□□□□ -1.28
HLA-DMB-258ENST00000418107 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
HLA-DMB-258ENST00000418107 XP32Q5T750 250 aa7.07□□□□□ -1.28
HLA-DMB-258ENST00000418107 KRTAP4-1Q9BYQ7 146 aa7.07□□□□□ -1.28
HLA-DMB-258ENST00000418107 IGKV2D-30A0A075B6S6 120 aa7.06□□□□□ -1.28
HLA-DMB-258ENST00000418107 IGKV2-30P06310 120 aa7.06□□□□□ -1.28
HLA-DMB-258ENST00000418107 ATP11AUNQ6ZP68 121 aa7.06□□□□□ -1.28
HLA-DMB-258ENST00000418107 H7BZZ5 65 aa7.05□□□□□ -1.28
HLA-DMB-258ENST00000418107 PCOTHQ58A44 107 aa7.05□□□□□ -1.28
HLA-DMB-258ENST00000418107 TMEM258P61165 79 aa7.04□□□□□ -1.28
HLA-DMB-258ENST00000418107 RPL37P61927 97 aaKnown RBP7.03□□□□□ -1.28
HLA-DMB-258ENST00000418107 CYP4F30PQ9H0H9 118 aa7.02□□□□□ -1.29
HLA-DMB-258ENST00000418107 FAM236DA0A1B0GTK5 79 aa6.99□□□□□ -1.29
HLA-DMB-258ENST00000418107 FAM236CP0DP71 79 aa6.99□□□□□ -1.29
HLA-DMB-258ENST00000418107 SEC61BP60468 96 aaKnown RBP6.99□□□□□ -1.29
HLA-DMB-258ENST00000418107 C7orf65Q6ZTY9 151 aa6.99□□□□□ -1.29
HLA-DMB-258ENST00000418107 ATP5EP56381 51 aaPredicted RBP6.96□□□□□ -1.29
HLA-DMB-258ENST00000418107 LCE2CQ5TA81 110 aa6.94□□□□□ -1.3
HLA-DMB-258ENST00000418107 SPINK7P58062 85 aa6.93□□□□□ -1.3
HLA-DMB-258ENST00000418107 SPANXA2-OT1Q8N9U9 137 aa6.93□□□□□ -1.3
HLA-DMB-258ENST00000418107 HRES1P13985 223 aa6.91□□□□□ -1.3
HLA-DMB-258ENST00000418107 KRTAP19-2Q3LHN2 52 aa6.88□□□□□ -1.31
HLA-DMB-258ENST00000418107 MT1HP80294 61 aa6.87□□□□□ -1.31
HLA-DMB-258ENST00000418107 C4orf26Q17RF5 130 aa6.83□□□□□ -1.32
HLA-DMB-258ENST00000418107 SERP1Q9Y6X1 66 aa6.83□□□□□ -1.32
HLA-DMB-258ENST00000418107 ACYP2P14621 99 aa6.8□□□□□ -1.32
HLA-DMB-258ENST00000418107 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms