RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 A0A1B0GVX0 72 aa8.98□□□□□ -0.97
CPNE1-210ENST00000416778 BATFQ16520 125 aa8.98□□□□□ -0.97
CPNE1-210ENST00000416778 HRES1P13985 223 aa8.97□□□□□ -0.97
CPNE1-210ENST00000416778 C9JAW5 83 aa8.96□□□□□ -0.98
CPNE1-210ENST00000416778 C8orf87E5RJ46 101 aa8.96□□□□□ -0.98
CPNE1-210ENST00000416778 Q6ZQT0 140 aa8.95□□□□□ -0.98
CPNE1-210ENST00000416778 C21orf62-AS1Q17RA5 79 aa8.93□□□□□ -0.98
CPNE1-210ENST00000416778 J3KT08 172 aa8.92□□□□□ -0.98
CPNE1-210ENST00000416778 PCP4L1A6NKN8 68 aa8.91□□□□□ -0.98
CPNE1-210ENST00000416778 TAX1BP3O14907 124 aa8.91□□□□□ -0.98
CPNE1-210ENST00000416778 NAA38Q9BRA0 125 aaKnown RBP8.91□□□□□ -0.98
CPNE1-210ENST00000416778 RBM12B-AS1Q9P1G2 102 aa8.91□□□□□ -0.98
CPNE1-210ENST00000416778 FAM236DA0A1B0GTK5 79 aa8.9□□□□□ -0.98
CPNE1-210ENST00000416778 FAM236CP0DP71 79 aa8.9□□□□□ -0.98
CPNE1-210ENST00000416778 ATXN8Q156A1 80 aa8.89□□□□□ -0.99
CPNE1-210ENST00000416778 C9orf118A6NHY6 69 aa8.87□□□□□ -0.99
CPNE1-210ENST00000416778 JMJD7-PLA2G4BH0Y9G9 81 aa8.87□□□□□ -0.99
CPNE1-210ENST00000416778 ZCCHC13Q8WW36 166 aaKnown RBP8.87□□□□□ -0.99
CPNE1-210ENST00000416778 LOC110117498A0A087WWA1 95 aa8.86□□□□□ -0.99
CPNE1-210ENST00000416778 A0A1B0GW54 56 aa8.86□□□□□ -0.99
CPNE1-210ENST00000416778 MT2AP02795 61 aa8.85□□□□□ -0.99
CPNE1-210ENST00000416778 COL5A1-AS1Q5SY13 56 aa8.85□□□□□ -0.99
CPNE1-210ENST00000416778 Q8N9P0 234 aaPredicted RBP8.85□□□□□ -0.99
CPNE1-210ENST00000416778 USH2AO75445 5202 aa8.84□□□□□ -0.99
CPNE1-210ENST00000416778 NDUFB1O75438 58 aa8.84□□□□□ -0.99
CPNE1-210ENST00000416778 SPINK7P58062 85 aa8.83□□□□□ -1
CPNE1-210ENST00000416778 PDE6GP18545 87 aa8.82□□□□□ -1
CPNE1-210ENST00000416778 LYRM7Q5U5X0 104 aa8.82□□□□□ -1
CPNE1-210ENST00000416778 A0A1W2PPM0 123 aa8.81□□□□□ -1
CPNE1-210ENST00000416778 A8MWP4 228 aa8.81□□□□□ -1
CPNE1-210ENST00000416778 IGKV3D-7A0A0C4DH55 119 aa8.8□□□□□ -1
CPNE1-210ENST00000416778 C8orf17Q9NRJ1 99 aa8.8□□□□□ -1
CPNE1-210ENST00000416778 MT1FP04733 61 aa8.78□□□□□ -1
CPNE1-210ENST00000416778 C14orf132Q9NPU4 83 aa8.78□□□□□ -1
CPNE1-210ENST00000416778 SSPOA2VEC9 5147 aa8.77□□□□□ -1
CPNE1-210ENST00000416778 MTURNQ8N3F0 131 aa8.77□□□□□ -1.01
CPNE1-210ENST00000416778 KRTAP9-3Q9BYQ3 159 aa8.75□□□□□ -1.01
CPNE1-210ENST00000416778 PRR15Q8IV56 129 aa8.74□□□□□ -1.01
CPNE1-210ENST00000416778 KRTAP10-10P60014 251 aa8.73□□□□□ -1.01
CPNE1-210ENST00000416778 NREPQ16612 68 aa8.73□□□□□ -1.01
CPNE1-210ENST00000416778 Q6ZVQ6 151 aa8.73□□□□□ -1.01
CPNE1-210ENST00000416778 LCE2BO14633 110 aa8.72□□□□□ -1.01
CPNE1-210ENST00000416778 SPCS1Q9Y6A9 102 aa8.71□□□□□ -1.02
CPNE1-210ENST00000416778 K7EP34 96 aa8.67□□□□□ -1.02
CPNE1-210ENST00000416778 MMP24-AS1A0A0U1RRL7 71 aa8.65□□□□□ -1.02
CPNE1-210ENST00000416778 WFDC13Q8IUB5 93 aa8.65□□□□□ -1.02
CPNE1-210ENST00000416778 H3BT86 120 aa8.64□□□□□ -1.03
CPNE1-210ENST00000416778 TMEM254Q8TBM7 123 aa8.64□□□□□ -1.03
CPNE1-210ENST00000416778 MRPL34Q9BQ48 92 aaKnown RBP8.64□□□□□ -1.03
CPNE1-210ENST00000416778 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.63□□□□□ -1.03
CPNE1-210ENST00000416778 PRO0461Q9UI25 63 aa8.62□□□□□ -1.03
CPNE1-210ENST00000416778 FCGBPQ9Y6R7 5405 aaPredicted RBP8.6□□□□□ -1.03
CPNE1-210ENST00000416778 K7EQZ3 153 aa8.6□□□□□ -1.03
CPNE1-210ENST00000416778 SMCPP49901 116 aaPredicted RBP8.6□□□□□ -1.03
CPNE1-210ENST00000416778 hDV103S1A0JD37 113 aa8.59□□□□□ -1.03
CPNE1-210ENST00000416778 KRTAP19-1Q8IUB9 90 aa8.59□□□□□ -1.03
CPNE1-210ENST00000416778 GTF2H5Q6ZYL4 71 aa8.58□□□□□ -1.04
CPNE1-210ENST00000416778 KRTAP9-7A8MTY7 169 aa8.54□□□□□ -1.04
CPNE1-210ENST00000416778 BPY2O14599 106 aa8.54□□□□□ -1.04
CPNE1-210ENST00000416778 NDUFS5O43920 106 aa8.53□□□□□ -1.04
CPNE1-210ENST00000416778 Q5W150 140 aa8.53□□□□□ -1.04
CPNE1-210ENST00000416778 H1FX-AS1Q4G0G2 97 aa8.52□□□□□ -1.05
CPNE1-210ENST00000416778 A0A1B0GV90 55 aa8.49□□□□□ -1.05
CPNE1-210ENST00000416778 F8W1H4 67 aa8.49□□□□□ -1.05
CPNE1-210ENST00000416778 Q8N9L7 120 aa8.47□□□□□ -1.05
CPNE1-210ENST00000416778 IGKV2D-30A0A075B6S6 120 aa8.45□□□□□ -1.06
CPNE1-210ENST00000416778 IGKV2-30P06310 120 aa8.45□□□□□ -1.06
CPNE1-210ENST00000416778 CASC2Q6XLA1 102 aa8.44□□□□□ -1.06
CPNE1-210ENST00000416778 C7orf65Q6ZTY9 151 aa8.42□□□□□ -1.06
CPNE1-210ENST00000416778 HCG22E2RYF7 251 aa8.41□□□□□ -1.06
CPNE1-210ENST00000416778 KRTAP19-6Q3LI70 58 aa8.41□□□□□ -1.06
CPNE1-210ENST00000416778 ETDBQ3ZM63 59 aa8.4□□□□□ -1.06
CPNE1-210ENST00000416778 LINC00846Q9NV44 126 aa8.38□□□□□ -1.07
CPNE1-210ENST00000416778 MACF1Q9UPN3 7388 aaKnown RBP8.38□□□□□ -1.07
CPNE1-210ENST00000416778 CXCL6P80162 114 aa8.37□□□□□ -1.07
CPNE1-210ENST00000416778 C4orf26Q17RF5 130 aa8.36□□□□□ -1.07
CPNE1-210ENST00000416778 UBL5Q9BZL1 73 aa8.33□□□□□ -1.08
CPNE1-210ENST00000416778 SYNE2Q8WXH0 6885 aaKnown RBP8.33□□□□□ -1.08
CPNE1-210ENST00000416778 KRTAP3-1Q9BYR8 98 aa8.3□□□□□ -1.08
CPNE1-210ENST00000416778 FAM240AA0A1B0GVK7 77 aa8.21□□□□□ -1.1
CPNE1-210ENST00000416778 C5orf47Q569G3 176 aa8.21□□□□□ -1.1
CPNE1-210ENST00000416778 C1orf64Q8NEQ6 169 aa8.19□□□□□ -1.1
CPNE1-210ENST00000416778 ACYP1P07311 99 aa8.18□□□□□ -1.1
CPNE1-210ENST00000416778 TP53AIP1Q9HCN2 124 aa8.18□□□□□ -1.1
CPNE1-210ENST00000416778 S4R3F8 94 aa8.15□□□□□ -1.1
CPNE1-210ENST00000416778 CSAG1Q6PB30 78 aa8.14□□□□□ -1.11
CPNE1-210ENST00000416778 LCA10Q71F78 164 aa8.12□□□□□ -1.11
CPNE1-210ENST00000416778 FAM236AA0A1B0GUQ0 79 aa8.08□□□□□ -1.12
CPNE1-210ENST00000416778 FAM236BA0A1B0GV22 79 aa8.08□□□□□ -1.12
CPNE1-210ENST00000416778 CYP4F30PQ9H0H9 118 aa8.07□□□□□ -1.12
CPNE1-210ENST00000416778 J3QR89 54 aa8.06□□□□□ -1.12
CPNE1-210ENST00000416778 KRTAP6-3Q3LI67 103 aa8.06□□□□□ -1.12
CPNE1-210ENST00000416778 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
CPNE1-210ENST00000416778 MT1BP07438 61 aa8.05□□□□□ -1.12
CPNE1-210ENST00000416778 SPRR2GQ9BYE4 73 aa8.05□□□□□ -1.12
CPNE1-210ENST00000416778 ATP5EP2Q5VTU8 51 aa8.04□□□□□ -1.12
CPNE1-210ENST00000416778 KRTAP19-8Q3LI54 63 aa8.03□□□□□ -1.12
CPNE1-210ENST00000416778 LINC00643Q86TS7 51 aa8.02□□□□□ -1.13
CPNE1-210ENST00000416778 Q5VV11 94 aa7.99□□□□□ -1.13
CPNE1-210ENST00000416778 A0A087WVE0 104 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms