RNA–Protein interactions for RNA: ENST00000415039.7

PSMD3-202, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-202ENST00000415039 LIMD2Q9BT23 127 aa12.6□□□□□ -0.39
PSMD3-202ENST00000415039 H0Y9P7 68 aa12.6□□□□□ -0.39
PSMD3-202ENST00000415039 SERP1Q9Y6X1 66 aa12.6□□□□□ -0.39
PSMD3-202ENST00000415039 C8orf87E5RJ46 101 aa12.58□□□□□ -0.4
PSMD3-202ENST00000415039 MRPL34Q9BQ48 92 aaKnown RBP12.58□□□□□ -0.4
PSMD3-202ENST00000415039 TYMSOSQ8TAI1 123 aa12.56□□□□□ -0.4
PSMD3-202ENST00000415039 TRAV22A0A0B4J277 110 aa12.55□□□□□ -0.4
PSMD3-202ENST00000415039 C4orf48Q5BLP8 95 aa12.55□□□□□ -0.4
PSMD3-202ENST00000415039 LINC00208Q96KT6 92 aa12.55□□□□□ -0.4
PSMD3-202ENST00000415039 C1orf195Q5TG92 126 aa12.52□□□□□ -0.4
PSMD3-202ENST00000415039 SPINK1P00995 79 aa12.52□□□□□ -0.41
PSMD3-202ENST00000415039 VPS13BQ7Z7G8 4022 aa12.51□□□□□ -0.41
PSMD3-202ENST00000415039 SMR3BP02814 79 aaPredicted RBP12.5□□□□□ -0.41
PSMD3-202ENST00000415039 NOTCH2NLQ7Z3S9 236 aa12.5□□□□□ -0.41
PSMD3-202ENST00000415039 NDUFS5O43920 106 aa12.47□□□□□ -0.41
PSMD3-202ENST00000415039 RPS29P62273 56 aaKnown RBP12.47□□□□□ -0.41
PSMD3-202ENST00000415039 C1orf64Q8NEQ6 169 aa12.47□□□□□ -0.41
PSMD3-202ENST00000415039 DYNC1H1Q14204 4646 aaKnown RBP12.47□□□□□ -0.41
PSMD3-202ENST00000415039 OXTP01178 125 aa12.46□□□□□ -0.42
PSMD3-202ENST00000415039 SPAG11AQ6PDA7 123 aa12.46□□□□□ -0.42
PSMD3-202ENST00000415039 KRTAP10-4P60372 401 aaPredicted RBP12.45□□□□□ -0.42
PSMD3-202ENST00000415039 PKHD1P08F94 4074 aa12.44□□□□□ -0.42
PSMD3-202ENST00000415039 LINC00313P59037 77 aa12.43□□□□□ -0.42
PSMD3-202ENST00000415039 RYR2Q92736 4967 aa12.43□□□□□ -0.42
PSMD3-202ENST00000415039 PRR26Q8N8Z3 221 aa12.41□□□□□ -0.42
PSMD3-202ENST00000415039 LINC00304Q8N9R0 145 aa12.41□□□□□ -0.42
PSMD3-202ENST00000415039 SPANXA2-OT1Q8N9U9 137 aa12.4□□□□□ -0.42
PSMD3-202ENST00000415039 CYP4F30PQ9H0H9 118 aa12.39□□□□□ -0.43
PSMD3-202ENST00000415039 APOBP04114 4563 aaKnown RBP12.33□□□□□ -0.44
PSMD3-202ENST00000415039 SMIM26A0A096LP01 95 aa12.33□□□□□ -0.44
PSMD3-202ENST00000415039 Q8N9P0 234 aaPredicted RBP12.33□□□□□ -0.44
PSMD3-202ENST00000415039 LOC101927531A0A1B0GV80 90 aa12.29□□□□□ -0.44
PSMD3-202ENST00000415039 FAM229AH3BQW9 127 aa12.28□□□□□ -0.44
PSMD3-202ENST00000415039 KRTAP13-3Q3SY46 172 aa12.28□□□□□ -0.44
PSMD3-202ENST00000415039 KRTAP16-1A8MUX0 517 aa12.27□□□□□ -0.44
PSMD3-202ENST00000415039 IGLV7-46A0A075B6I9 117 aa12.24□□□□□ -0.45
PSMD3-202ENST00000415039 Q5W150 140 aa12.24□□□□□ -0.45
PSMD3-202ENST00000415039 PRR4Q16378 134 aa12.21□□□□□ -0.46
PSMD3-202ENST00000415039 KMT2CQ8NEZ4 4911 aaKnown RBP12.2□□□□□ -0.46
PSMD3-202ENST00000415039 PCOTHQ58A44 107 aa12.19□□□□□ -0.46
PSMD3-202ENST00000415039 FP248Q71RG6 208 aaPredicted RBP12.16□□□□□ -0.46
PSMD3-202ENST00000415039 FAT1Q14517 4588 aa12.14□□□□□ -0.47
PSMD3-202ENST00000415039 PKHD1L1Q86WI1 4243 aa12.11□□□□□ -0.47
PSMD3-202ENST00000415039 Q5VSD8 79 aa12.1□□□□□ -0.47
PSMD3-202ENST00000415039 IGKV2-30P06310 120 aa12.07□□□□□ -0.48
PSMD3-202ENST00000415039 C4orf26Q17RF5 130 aa12.06□□□□□ -0.48
PSMD3-202ENST00000415039 KRTAP10-8P60410 259 aa12.02□□□□□ -0.49
PSMD3-202ENST00000415039 RETNLBQ9BQ08 111 aa12.01□□□□□ -0.49
PSMD3-202ENST00000415039 COA5Q86WW8 74 aa12□□□□□ -0.49
PSMD3-202ENST00000415039 RYR3Q15413 4870 aa12□□□□□ -0.49
PSMD3-202ENST00000415039 Q1T7F1 81 aa11.99□□□□□ -0.49
PSMD3-202ENST00000415039 MPLKIPQ8TAP9 179 aa11.97□□□□□ -0.49
PSMD3-202ENST00000415039 HRES1P13985 223 aa11.95□□□□□ -0.5
PSMD3-202ENST00000415039 Q8N1X5 172 aa11.95□□□□□ -0.5
PSMD3-202ENST00000415039 C20orf166-AS1Q96NR2 134 aa11.95□□□□□ -0.5
PSMD3-202ENST00000415039 V9GYY9 64 aa11.95□□□□□ -0.5
PSMD3-202ENST00000415039 A8MUU9 505 aa11.93□□□□□ -0.5
PSMD3-202ENST00000415039 HSPG2P98160 4391 aa11.92□□□□□ -0.5
PSMD3-202ENST00000415039 ACYP2P14621 99 aa11.89□□□□□ -0.51
PSMD3-202ENST00000415039 C9orf92A6NGG3 77 aa11.88□□□□□ -0.51
PSMD3-202ENST00000415039 DMAC1Q96GE9 116 aa11.88□□□□□ -0.51
PSMD3-202ENST00000415039 IGKV2D-30A0A075B6S6 120 aa11.88□□□□□ -0.51
PSMD3-202ENST00000415039 FLG2Q5D862 2391 aaPredicted RBP11.86□□□□□ -0.51
PSMD3-202ENST00000415039 C7orf65Q6ZTY9 151 aa11.85□□□□□ -0.51
PSMD3-202ENST00000415039 RYR1P21817 5038 aa11.83□□□□□ -0.52
PSMD3-202ENST00000415039 KRTAP17-1Q9BYP8 105 aa11.79□□□□□ -0.52
PSMD3-202ENST00000415039 Q75L30 129 aa11.79□□□□□ -0.52
PSMD3-202ENST00000415039 TNXBP22105 4242 aa11.77□□□□□ -0.53
PSMD3-202ENST00000415039 MT1HL1P0DM35 61 aa11.7□□□□□ -0.54
PSMD3-202ENST00000415039 CHKB-CPT1BH3BT56 60 aa11.69□□□□□ -0.54
PSMD3-202ENST00000415039 LINC01558Q9Y6Z2 57 aa11.68□□□□□ -0.54
PSMD3-202ENST00000415039 A8MUN3 132 aa11.67□□□□□ -0.54
PSMD3-202ENST00000415039 PSPHP1O15172 72 aa11.67□□□□□ -0.54
PSMD3-202ENST00000415039 LRP1Q07954 4544 aaKnown RBP11.65□□□□□ -0.54
PSMD3-202ENST00000415039 FAT3Q8TDW7 4589 aa11.65□□□□□ -0.54
PSMD3-202ENST00000415039 PRR15LQ9BU68 103 aa11.62□□□□□ -0.55
PSMD3-202ENST00000415039 Q5VV11 94 aa11.61□□□□□ -0.55
PSMD3-202ENST00000415039 EPPK1P58107 5090 aaKnown RBP11.59□□□□□ -0.55
PSMD3-202ENST00000415039 SPINK7P58062 85 aa11.58□□□□□ -0.55
PSMD3-202ENST00000415039 SVIPQ8NHG7 77 aa11.58□□□□□ -0.55
PSMD3-202ENST00000415039 ATP11AUNQ6ZP68 121 aa11.58□□□□□ -0.56
PSMD3-202ENST00000415039 KIAA1109Q2LD37 5005 aa11.57□□□□□ -0.56
PSMD3-202ENST00000415039 RPL37P61927 97 aaKnown RBP11.56□□□□□ -0.56
PSMD3-202ENST00000415039 PRO0628Q9UI54 55 aa11.54□□□□□ -0.56
PSMD3-202ENST00000415039 BRK1Q8WUW1 75 aa11.54□□□□□ -0.56
PSMD3-202ENST00000415039 DMBT1Q9UGM3 2413 aaPredicted RBP11.53□□□□□ -0.56
PSMD3-202ENST00000415039 XP32Q5T750 250 aa11.52□□□□□ -0.57
PSMD3-202ENST00000415039 BIRC6Q9NR09 4857 aa11.43□□□□□ -0.58
PSMD3-202ENST00000415039 SPTSSBQ8NFR3 76 aa11.41□□□□□ -0.58
PSMD3-202ENST00000415039 COX6B2Q6YFQ2 88 aa11.4□□□□□ -0.58
PSMD3-202ENST00000415039 TPRXLQ17RH7 258 aa11.39□□□□□ -0.59
PSMD3-202ENST00000415039 KRTAP3-1Q9BYR8 98 aa11.38□□□□□ -0.59
PSMD3-202ENST00000415039 KRTAP4-5Q9BYR2 181 aa11.37□□□□□ -0.59
PSMD3-202ENST00000415039 A6NED7 52 aa11.36□□□□□ -0.59
PSMD3-202ENST00000415039 A0A1B0GU69 56 aa11.35□□□□□ -0.59
PSMD3-202ENST00000415039 MYCBP2O75592 4640 aa11.31□□□□□ -0.6
PSMD3-202ENST00000415039 CDC42SE1Q9NRR8 79 aa11.24□□□□□ -0.61
PSMD3-202ENST00000415039 LCA10Q71F78 164 aa11.2□□□□□ -0.62
PSMD3-202ENST00000415039 SEC61GP60059 68 aa11.2□□□□□ -0.62
PSMD3-202ENST00000415039 J3QL48 77 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms