RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 LCE1DQ5T752 114 aa6.56□□□□□ -1.36
HDAC9-206ENST00000413380 Q96NJ1 140 aa6.56□□□□□ -1.36
HDAC9-206ENST00000413380 C1orf195Q5TG92 126 aa6.55□□□□□ -1.36
HDAC9-206ENST00000413380 ACYP1P07311 99 aa6.54□□□□□ -1.36
HDAC9-206ENST00000413380 FP248Q71RG6 208 aaPredicted RBP6.54□□□□□ -1.36
HDAC9-206ENST00000413380 LINC00472Q9H8W2 130 aa6.54□□□□□ -1.36
HDAC9-206ENST00000413380 LINC00846Q9NV44 126 aa6.52□□□□□ -1.37
HDAC9-206ENST00000413380 HMCN2Q8NDA2 5059 aa6.5□□□□□ -1.37
HDAC9-206ENST00000413380 J3QR89 54 aa6.5□□□□□ -1.37
HDAC9-206ENST00000413380 NREPQ16612 68 aa6.5□□□□□ -1.37
HDAC9-206ENST00000413380 RETNLBQ9BQ08 111 aa6.5□□□□□ -1.37
HDAC9-206ENST00000413380 Q6ZVQ6 151 aa6.49□□□□□ -1.37
HDAC9-206ENST00000413380 J3KT08 172 aa6.48□□□□□ -1.37
HDAC9-206ENST00000413380 UBL5Q9BZL1 73 aa6.48□□□□□ -1.37
HDAC9-206ENST00000413380 IGLV7-46A0A075B6I9 117 aa6.45□□□□□ -1.38
HDAC9-206ENST00000413380 K7ERU9 68 aa6.45□□□□□ -1.38
HDAC9-206ENST00000413380 IGKV4-1P06312 121 aa6.45□□□□□ -1.38
HDAC9-206ENST00000413380 TPRXLQ17RH7 258 aa6.44□□□□□ -1.38
HDAC9-206ENST00000413380 PRR4Q16378 134 aa6.43□□□□□ -1.38
HDAC9-206ENST00000413380 DEFB116Q30KQ4 102 aa6.43□□□□□ -1.38
HDAC9-206ENST00000413380 SIGMAR1Q99720 223 aa6.43□□□□□ -1.38
HDAC9-206ENST00000413380 LPAP08519 4548 aa6.43□□□□□ -1.38
HDAC9-206ENST00000413380 A8MWP4 228 aa6.42□□□□□ -1.38
HDAC9-206ENST00000413380 BPY2O14599 106 aa6.42□□□□□ -1.38
HDAC9-206ENST00000413380 DSCR10P59022 87 aa6.42□□□□□ -1.38
HDAC9-206ENST00000413380 KRTAP13-3Q3SY46 172 aa6.42□□□□□ -1.38
HDAC9-206ENST00000413380 CXCL6P80162 114 aa6.41□□□□□ -1.38
HDAC9-206ENST00000413380 A0A1B0GVX0 72 aa6.4□□□□□ -1.38
HDAC9-206ENST00000413380 ATP5EP2Q5VTU8 51 aa6.4□□□□□ -1.38
HDAC9-206ENST00000413380 LINC00643Q86TS7 51 aa6.4□□□□□ -1.38
HDAC9-206ENST00000413380 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.38
HDAC9-206ENST00000413380 IGKV3D-7A0A0C4DH55 119 aa6.39□□□□□ -1.39
HDAC9-206ENST00000413380 PRR15Q8IV56 129 aa6.39□□□□□ -1.39
HDAC9-206ENST00000413380 KRTAP3-1Q9BYR8 98 aa6.39□□□□□ -1.39
HDAC9-206ENST00000413380 LRP2P98164 4655 aa6.38□□□□□ -1.39
HDAC9-206ENST00000413380 NDUFB1O75438 58 aa6.38□□□□□ -1.39
HDAC9-206ENST00000413380 C8orf87E5RJ46 101 aa6.37□□□□□ -1.39
HDAC9-206ENST00000413380 K7EQZ3 153 aa6.36□□□□□ -1.39
HDAC9-206ENST00000413380 IGHV6-1A0A0B4J1U7 121 aa6.34□□□□□ -1.39
HDAC9-206ENST00000413380 KRTAP16-1A8MUX0 517 aa6.33□□□□□ -1.4
HDAC9-206ENST00000413380 LINC00313P59037 77 aa6.33□□□□□ -1.4
HDAC9-206ENST00000413380 NOTCH2NLQ7Z3S9 236 aa6.33□□□□□ -1.4
HDAC9-206ENST00000413380 KRTAP9-3Q9BYQ3 159 aa6.33□□□□□ -1.4
HDAC9-206ENST00000413380 C8orf17Q9NRJ1 99 aa6.33□□□□□ -1.4
HDAC9-206ENST00000413380 MMP24-AS1A0A0U1RRL7 71 aa6.32□□□□□ -1.4
HDAC9-206ENST00000413380 C9orf92A6NGG3 77 aa6.32□□□□□ -1.4
HDAC9-206ENST00000413380 Q8N9L7 120 aa6.32□□□□□ -1.4
HDAC9-206ENST00000413380 KRTAP4-9Q9BYQ8 210 aa6.32□□□□□ -1.4
HDAC9-206ENST00000413380 MUC17Q685J3 4493 aa6.32□□□□□ -1.4
HDAC9-206ENST00000413380 C20orf166-AS1Q96NR2 134 aa6.3□□□□□ -1.4
HDAC9-206ENST00000413380 A8MUU9 505 aa6.28□□□□□ -1.4
HDAC9-206ENST00000413380 LCE5AQ5TCM9 118 aa6.28□□□□□ -1.4
HDAC9-206ENST00000413380 Q75L30 129 aa6.28□□□□□ -1.4
HDAC9-206ENST00000413380 Q8N9P0 234 aaPredicted RBP6.27□□□□□ -1.41
HDAC9-206ENST00000413380 TMEM254Q8TBM7 123 aa6.27□□□□□ -1.41
HDAC9-206ENST00000413380 hDV103S1A0JD37 113 aa6.26□□□□□ -1.41
HDAC9-206ENST00000413380 HCG22E2RYF7 251 aa6.26□□□□□ -1.41
HDAC9-206ENST00000413380 IMUPQ9GZP8 106 aa6.26□□□□□ -1.41
HDAC9-206ENST00000413380 RPL37P61927 97 aaKnown RBP6.25□□□□□ -1.41
HDAC9-206ENST00000413380 MRPL34Q9BQ48 92 aaKnown RBP6.25□□□□□ -1.41
HDAC9-206ENST00000413380 CASC2Q6XLA1 102 aa6.24□□□□□ -1.41
HDAC9-206ENST00000413380 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
HDAC9-206ENST00000413380 MT-ATP8P03928 68 aa6.23□□□□□ -1.41
HDAC9-206ENST00000413380 HIST1H4AP62805 103 aaKnown RBP6.22□□□□□ -1.41
HDAC9-206ENST00000413380 UBR4Q5T4S7 5183 aa6.21□□□□□ -1.41
HDAC9-206ENST00000413380 WFDC13Q8IUB5 93 aa6.21□□□□□ -1.42
HDAC9-206ENST00000413380 A0A087WVE0 104 aa6.2□□□□□ -1.42
HDAC9-206ENST00000413380 SEC61BP60468 96 aaKnown RBP6.18□□□□□ -1.42
HDAC9-206ENST00000413380 KRTAP4-11Q9BYQ6 195 aa6.15□□□□□ -1.42
HDAC9-206ENST00000413380 ATP11AUNQ6ZP68 121 aa6.14□□□□□ -1.43
HDAC9-206ENST00000413380 ZCCHC13Q8WW36 166 aaKnown RBP6.14□□□□□ -1.43
HDAC9-206ENST00000413380 TP53AIP1Q9HCN2 124 aa6.14□□□□□ -1.43
HDAC9-206ENST00000413380 PCOTHQ58A44 107 aa6.13□□□□□ -1.43
HDAC9-206ENST00000413380 RNF213Q63HN8 5207 aa6.12□□□□□ -1.43
HDAC9-206ENST00000413380 NDUFS5O43920 106 aa6.12□□□□□ -1.43
HDAC9-206ENST00000413380 KRTAP4-2Q9BYR5 136 aa6.11□□□□□ -1.43
HDAC9-206ENST00000413380 OCR1Q9BZK8 76 aa6.1□□□□□ -1.43
HDAC9-206ENST00000413380 MUC2Q02817 5179 aa6.09□□□□□ -1.43
HDAC9-206ENST00000413380 FAM236AA0A1B0GUQ0 79 aa6.09□□□□□ -1.43
HDAC9-206ENST00000413380 FAM236BA0A1B0GV22 79 aa6.09□□□□□ -1.43
HDAC9-206ENST00000413380 Q5W150 140 aa6.08□□□□□ -1.44
HDAC9-206ENST00000413380 UQCRQO14949 82 aa6.07□□□□□ -1.44
HDAC9-206ENST00000413380 KRTAP4-1Q9BYQ7 146 aa6.06□□□□□ -1.44
HDAC9-206ENST00000413380 TRAV22A0A0B4J277 110 aa6.04□□□□□ -1.44
HDAC9-206ENST00000413380 SCGB1A1P11684 91 aa6.04□□□□□ -1.44
HDAC9-206ENST00000413380 SMIM20Q8N5G0 67 aa6.04□□□□□ -1.44
HDAC9-206ENST00000413380 ATOX1O00244 68 aa6.03□□□□□ -1.44
HDAC9-206ENST00000413380 TRAV7A0A075B6U4 112 aa6□□□□□ -1.45
HDAC9-206ENST00000413380 IGKV2-30P06310 120 aa5.99□□□□□ -1.45
HDAC9-206ENST00000413380 SPINK7P58062 85 aa5.99□□□□□ -1.45
HDAC9-206ENST00000413380 C5orf47Q569G3 176 aa5.99□□□□□ -1.45
HDAC9-206ENST00000413380 H0Y9P7 68 aa5.98□□□□□ -1.45
HDAC9-206ENST00000413380 C7orf65Q6ZTY9 151 aa5.98□□□□□ -1.45
HDAC9-206ENST00000413380 H3BPC8 53 aa5.97□□□□□ -1.45
HDAC9-206ENST00000413380 MPLKIPQ8TAP9 179 aa5.97□□□□□ -1.45
HDAC9-206ENST00000413380 LOC101927531A0A1B0GV80 90 aa5.96□□□□□ -1.46
HDAC9-206ENST00000413380 HRES1P13985 223 aa5.96□□□□□ -1.46
HDAC9-206ENST00000413380 MP68P56378 58 aa5.95□□□□□ -1.46
HDAC9-206ENST00000413380 SERP2Q8N6R1 65 aa5.95□□□□□ -1.46
HDAC9-206ENST00000413380 IGKV2D-30A0A075B6S6 120 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms