RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 TRBV20-1A0A075B6N2 111 aa4.19□□□□□ -1.74
CPSF4-202ENST00000412686 RBM3P98179 157 aaKnown RBP4.19□□□□□ -1.74
CPSF4-202ENST00000412686 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
CPSF4-202ENST00000412686 KRTAP4-1Q9BYQ7 146 aa4.19□□□□□ -1.74
CPSF4-202ENST00000412686 DSCR8Q96T75 97 aa4.18□□□□□ -1.74
CPSF4-202ENST00000412686 SS18L2Q9UHA2 77 aa4.18□□□□□ -1.74
CPSF4-202ENST00000412686 DEFB116Q30KQ4 102 aa4.17□□□□□ -1.74
CPSF4-202ENST00000412686 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
CPSF4-202ENST00000412686 SPCS1Q9Y6A9 102 aa4.17□□□□□ -1.74
CPSF4-202ENST00000412686 SEC61BP60468 96 aaKnown RBP4.16□□□□□ -1.74
CPSF4-202ENST00000412686 COL5A1-AS1Q5SY13 56 aa4.16□□□□□ -1.74
CPSF4-202ENST00000412686 C14orf132Q9NPU4 83 aa4.16□□□□□ -1.74
CPSF4-202ENST00000412686 JMJD7-PLA2G4BH0Y9G9 81 aa4.15□□□□□ -1.75
CPSF4-202ENST00000412686 PCOTHQ58A44 107 aa4.15□□□□□ -1.75
CPSF4-202ENST00000412686 Q6ZQT0 140 aa4.15□□□□□ -1.75
CPSF4-202ENST00000412686 OBSCN-AS1Q96MR7 158 aa4.15□□□□□ -1.75
CPSF4-202ENST00000412686 SIGMAR1Q99720 223 aa4.15□□□□□ -1.75
CPSF4-202ENST00000412686 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
CPSF4-202ENST00000412686 H3BT86 120 aa4.14□□□□□ -1.75
CPSF4-202ENST00000412686 IGKV4-1P06312 121 aa4.14□□□□□ -1.75
CPSF4-202ENST00000412686 DSCR10P59022 87 aa4.14□□□□□ -1.75
CPSF4-202ENST00000412686 RPL37P61927 97 aaKnown RBP4.14□□□□□ -1.75
CPSF4-202ENST00000412686 LINC00472Q9H8W2 130 aa4.14□□□□□ -1.75
CPSF4-202ENST00000412686 MUC2Q02817 5179 aa4.14□□□□□ -1.75
CPSF4-202ENST00000412686 LOC110117498A0A087WWA1 95 aa4.13□□□□□ -1.75
CPSF4-202ENST00000412686 K7EP34 96 aa4.12□□□□□ -1.75
CPSF4-202ENST00000412686 NOTCH2NLQ7Z3S9 236 aa4.12□□□□□ -1.75
CPSF4-202ENST00000412686 PRO0461Q9UI25 63 aa4.11□□□□□ -1.75
CPSF4-202ENST00000412686 IGHV6-1A0A0B4J1U7 121 aa4.09□□□□□ -1.75
CPSF4-202ENST00000412686 KRTAP16-1A8MUX0 517 aa4.09□□□□□ -1.75
CPSF4-202ENST00000412686 PDE6GP18545 87 aa4.09□□□□□ -1.75
CPSF4-202ENST00000412686 Q75L30 129 aa4.09□□□□□ -1.75
CPSF4-202ENST00000412686 C20orf166-AS1Q96NR2 134 aa4.08□□□□□ -1.76
CPSF4-202ENST00000412686 A0A1B0GVX0 72 aa4.07□□□□□ -1.76
CPSF4-202ENST00000412686 A8MUU9 505 aa4.07□□□□□ -1.76
CPSF4-202ENST00000412686 LINC00313P59037 77 aa4.07□□□□□ -1.76
CPSF4-202ENST00000412686 A0A0U1RQV1 116 aa4.06□□□□□ -1.76
CPSF4-202ENST00000412686 KRTAP19-2Q3LHN2 52 aa4.06□□□□□ -1.76
CPSF4-202ENST00000412686 IGKV3D-7A0A0C4DH55 119 aa4.05□□□□□ -1.76
CPSF4-202ENST00000412686 A0A1B0GW54 56 aa4.05□□□□□ -1.76
CPSF4-202ENST00000412686 J3KT08 172 aa4.05□□□□□ -1.76
CPSF4-202ENST00000412686 ATP11AUNQ6ZP68 121 aa4.05□□□□□ -1.76
CPSF4-202ENST00000412686 GTF2H5Q6ZYL4 71 aa4.05□□□□□ -1.76
CPSF4-202ENST00000412686 FAT4Q6V0I7 4981 aa4.05□□□□□ -1.76
CPSF4-202ENST00000412686 A8MWP4 228 aa4.04□□□□□ -1.76
CPSF4-202ENST00000412686 NREPQ16612 68 aa4.04□□□□□ -1.76
CPSF4-202ENST00000412686 C8orf87E5RJ46 101 aa4.03□□□□□ -1.76
CPSF4-202ENST00000412686 ETDBQ3ZM63 59 aa4.02□□□□□ -1.77
CPSF4-202ENST00000412686 Q6ZVQ6 151 aa4.02□□□□□ -1.77
CPSF4-202ENST00000412686 C8orf17Q9NRJ1 99 aa4.02□□□□□ -1.77
CPSF4-202ENST00000412686 F8W1H4 67 aa4.01□□□□□ -1.77
CPSF4-202ENST00000412686 K7EQZ3 153 aa4.01□□□□□ -1.77
CPSF4-202ENST00000412686 NDUFB1O75438 58 aa4.01□□□□□ -1.77
CPSF4-202ENST00000412686 LINC00846Q9NV44 126 aa4.01□□□□□ -1.77
CPSF4-202ENST00000412686 PRR15Q8IV56 129 aa4□□□□□ -1.77
CPSF4-202ENST00000412686 MMP24-AS1A0A0U1RRL7 71 aa3.99□□□□□ -1.77
CPSF4-202ENST00000412686 A0A1B0GV90 55 aa3.99□□□□□ -1.77
CPSF4-202ENST00000412686 BPY2O14599 106 aa3.99□□□□□ -1.77
CPSF4-202ENST00000412686 Q8N9L7 120 aa3.99□□□□□ -1.77
CPSF4-202ENST00000412686 MT1HP80294 61 aa3.97□□□□□ -1.77
CPSF4-202ENST00000412686 Q8N9P0 234 aaPredicted RBP3.97□□□□□ -1.77
CPSF4-202ENST00000412686 ZCCHC13Q8WW36 166 aaKnown RBP3.96□□□□□ -1.78
CPSF4-202ENST00000412686 COX6B2Q6YFQ2 88 aa3.95□□□□□ -1.78
CPSF4-202ENST00000412686 WFDC13Q8IUB5 93 aa3.95□□□□□ -1.78
CPSF4-202ENST00000412686 TMEM254Q8TBM7 123 aa3.95□□□□□ -1.78
CPSF4-202ENST00000412686 MRPL34Q9BQ48 92 aaKnown RBP3.95□□□□□ -1.78
CPSF4-202ENST00000412686 UBL5Q9BZL1 73 aa3.95□□□□□ -1.78
CPSF4-202ENST00000412686 hDV103S1A0JD37 113 aa3.94□□□□□ -1.78
CPSF4-202ENST00000412686 HRES1P13985 223 aa3.93□□□□□ -1.78
CPSF4-202ENST00000412686 NDUFS5O43920 106 aa3.92□□□□□ -1.78
CPSF4-202ENST00000412686 SPINK7P58062 85 aa3.91□□□□□ -1.78
CPSF4-202ENST00000412686 CASC2Q6XLA1 102 aa3.91□□□□□ -1.78
CPSF4-202ENST00000412686 HCG22E2RYF7 251 aa3.9□□□□□ -1.79
CPSF4-202ENST00000412686 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
CPSF4-202ENST00000412686 Q5W150 140 aa3.89□□□□□ -1.79
CPSF4-202ENST00000412686 MPLKIPQ8TAP9 179 aa3.89□□□□□ -1.79
CPSF4-202ENST00000412686 M0R2T5 61 aa3.88□□□□□ -1.79
CPSF4-202ENST00000412686 CXCL6P80162 114 aa3.88□□□□□ -1.79
CPSF4-202ENST00000412686 FAM236DA0A1B0GTK5 79 aa3.87□□□□□ -1.79
CPSF4-202ENST00000412686 FAM240AA0A1B0GVK7 77 aa3.87□□□□□ -1.79
CPSF4-202ENST00000412686 FAM236CP0DP71 79 aa3.87□□□□□ -1.79
CPSF4-202ENST00000412686 ACYP1P07311 99 aa3.86□□□□□ -1.79
CPSF4-202ENST00000412686 KRTAP10-6P60371 365 aaPredicted RBP3.86□□□□□ -1.79
CPSF4-202ENST00000412686 FLGP20930 4061 aaPredicted RBP3.86□□□□□ -1.79
CPSF4-202ENST00000412686 RBM12B-AS1Q9P1G2 102 aa3.85□□□□□ -1.79
CPSF4-202ENST00000412686 IGKV2D-30A0A075B6S6 120 aa3.84□□□□□ -1.79
CPSF4-202ENST00000412686 IGKV2-30P06310 120 aa3.84□□□□□ -1.79
CPSF4-202ENST00000412686 HIST1H4AP62805 103 aaKnown RBP3.82□□□□□ -1.8
CPSF4-202ENST00000412686 A0A087WVE0 104 aa3.81□□□□□ -1.8
CPSF4-202ENST00000412686 ATP5EP2Q5VTU8 51 aa3.81□□□□□ -1.8
CPSF4-202ENST00000412686 C7orf65Q6ZTY9 151 aa3.81□□□□□ -1.8
CPSF4-202ENST00000412686 LINC00643Q86TS7 51 aa3.8□□□□□ -1.8
CPSF4-202ENST00000412686 C4orf26Q17RF5 130 aa3.77□□□□□ -1.81
CPSF4-202ENST00000412686 KRTAP9-8Q9BYQ0 159 aa3.77□□□□□ -1.81
CPSF4-202ENST00000412686 TP53AIP1Q9HCN2 124 aa3.77□□□□□ -1.81
CPSF4-202ENST00000412686 J3QR89 54 aa3.76□□□□□ -1.81
CPSF4-202ENST00000412686 H1FX-AS1Q4G0G2 97 aa3.74□□□□□ -1.81
CPSF4-202ENST00000412686 TRAV22A0A0B4J277 110 aa3.73□□□□□ -1.81
CPSF4-202ENST00000412686 MT2AP02795 61 aa3.73□□□□□ -1.81
CPSF4-202ENST00000412686 MT1FP04733 61 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms