RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 C4orf3Q8WVX3 66 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 LINC00472Q9H8W2 130 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 TP53AIP1Q9HCN2 124 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 XAGE1AQ9HD64 81 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 UTP20O75691 2785 aaKnown RBP1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 UBR5O95071 2799 aaPredicted RBP1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 COL12A1Q99715 3063 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 NOTCH1P46531 2555 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 APC2O95996 2303 aa1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 PTPRZ1P23471 2315 aaPredicted RBP1.32□□□□□ -2.2
HMGB3P2-201ENST00000411913 FBN1P35555 2871 aaKnown RBP1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 SORL1Q92673 2214 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 CELSR2Q9HCU4 2923 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 AKAP6Q13023 2319 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 IGLV10-54A0A075B6I4 117 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 IGKV2-24A0A0C4DH68 120 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 A8MWP4 228 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 ROMO1P60602 79 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 KRTAP13-2Q52LG2 175 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 WFDC13Q8IUB5 93 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 RETNLBQ9BQ08 111 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 PRO3102Q9H379 93 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 PRO0255Q9UI72 69 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 SPTA1P02549 2419 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 VPS13CQ709C8 3753 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 COL6A6A6NMZ7 2263 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 OTOGLQ3ZCN5 2332 aa1.31□□□□□ -2.2
HMGB3P2-201ENST00000411913 TEX15Q9BXT5 2789 aa1.3□□□□□ -2.2
HMGB3P2-201ENST00000411913 APCP25054 2843 aa1.3□□□□□ -2.2
HMGB3P2-201ENST00000411913 HYDINQ4G0P3 5121 aa1.3□□□□□ -2.2
HMGB3P2-201ENST00000411913 TENM4Q6N022 2769 aa1.3□□□□□ -2.2
HMGB3P2-201ENST00000411913 ANGP03950 147 aaKnown RBP1.3□□□□□ -2.2
HMGB3P2-201ENST00000411913 MSMBP08118 114 aa1.3□□□□□ -2.2
HMGB3P2-201ENST00000411913 SPRR1BP22528 89 aa1.3□□□□□ -2.2
HMGB3P2-201ENST00000411913 DEFB136Q30KP8 78 aa1.3□□□□□ -2.2
HMGB3P2-201ENST00000411913 LELP1Q5T871 98 aa1.3□□□□□ -2.2
HMGB3P2-201ENST00000411913 CSAG1Q6PB30 78 aa1.3□□□□□ -2.2
HMGB3P2-201ENST00000411913 WFDC10BQ8IUB3 73 aa1.3□□□□□ -2.2
HMGB3P2-201ENST00000411913 BIRC6Q9NR09 4857 aa1.3□□□□□ -2.2
HMGB3P2-201ENST00000411913 CRYBG3Q68DQ2 2970 aa1.3□□□□□ -2.2
HMGB3P2-201ENST00000411913 SPTAN1Q13813 2472 aaKnown RBP1.3□□□□□ -2.2
HMGB3P2-201ENST00000411913 TLN1Q9Y490 2541 aaKnown RBP1.29□□□□□ -2.2
HMGB3P2-201ENST00000411913 TENM2Q9NT68 2774 aa1.29□□□□□ -2.2
HMGB3P2-201ENST00000411913 P0C880 135 aa1.29□□□□□ -2.2
HMGB3P2-201ENST00000411913 RPL37AP61513 92 aaKnown RBP1.29□□□□□ -2.2
HMGB3P2-201ENST00000411913 KRTAP25-1Q3LHN0 102 aa1.29□□□□□ -2.2
HMGB3P2-201ENST00000411913 C1orf134Q5TEV5 83 aa1.29□□□□□ -2.2
HMGB3P2-201ENST00000411913 SPINT4Q6UDR6 99 aa1.29□□□□□ -2.2
HMGB3P2-201ENST00000411913 DEFB105AQ8NG35 78 aa1.29□□□□□ -2.2
HMGB3P2-201ENST00000411913 DMAC1Q96GE9 116 aa1.29□□□□□ -2.2
HMGB3P2-201ENST00000411913 Q96NJ1 140 aa1.29□□□□□ -2.2
HMGB3P2-201ENST00000411913 TRRAPQ9Y4A5 3859 aa1.29□□□□□ -2.2
HMGB3P2-201ENST00000411913 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.29□□□□□ -2.2
HMGB3P2-201ENST00000411913 ANK3Q12955 4377 aaKnown RBP1.29□□□□□ -2.2
HMGB3P2-201ENST00000411913 IGSF10Q6WRI0 2623 aa1.28□□□□□ -2.2
HMGB3P2-201ENST00000411913 GPR98Q8WXG9 6306 aa1.28□□□□□ -2.2
HMGB3P2-201ENST00000411913 A0A087WSZ3 146 aa1.28□□□□□ -2.2
HMGB3P2-201ENST00000411913 UQCR11O14957 56 aa1.28□□□□□ -2.2
HMGB3P2-201ENST00000411913 IGLV7-43P04211 117 aa1.28□□□□□ -2.2
HMGB3P2-201ENST00000411913 MIR22HGQ0VDD5 57 aa1.28□□□□□ -2.2
HMGB3P2-201ENST00000411913 PCOTHQ58A44 107 aa1.28□□□□□ -2.2
HMGB3P2-201ENST00000411913 DEFB124Q8NES8 71 aa1.28□□□□□ -2.2
HMGB3P2-201ENST00000411913 ZNF706Q9Y5V0 76 aaPredicted RBP1.28□□□□□ -2.2
HMGB3P2-201ENST00000411913 ATRQ13535 2644 aa1.27□□□□□ -2.21
HMGB3P2-201ENST00000411913 LRRK2Q5S007 2527 aa1.27□□□□□ -2.21
HMGB3P2-201ENST00000411913 A0A096LPF7 62 aa1.27□□□□□ -2.21
HMGB3P2-201ENST00000411913 A0A0G2JQZ4 141 aa1.27□□□□□ -2.21
HMGB3P2-201ENST00000411913 A0A1W2PNN7 141 aa1.27□□□□□ -2.21
HMGB3P2-201ENST00000411913 DEFB130BP0DP73 79 aa1.27□□□□□ -2.21
HMGB3P2-201ENST00000411913 DEFB130AP0DP74 79 aa1.27□□□□□ -2.21
HMGB3P2-201ENST00000411913 ACYP2P14621 99 aa1.27□□□□□ -2.21
HMGB3P2-201ENST00000411913 ZANQ9Y493 2812 aa1.27□□□□□ -2.21
HMGB3P2-201ENST00000411913 NCOR2Q9Y618 2525 aa1.27□□□□□ -2.21
HMGB3P2-201ENST00000411913 RIF1Q5UIP0 2472 aaKnown RBP1.27□□□□□ -2.21
HMGB3P2-201ENST00000411913 PKD1L1Q8TDX9 2849 aa1.26□□□□□ -2.21
HMGB3P2-201ENST00000411913 EPPK1P58107 5090 aaKnown RBP1.26□□□□□ -2.21
HMGB3P2-201ENST00000411913 SRRM2Q9UQ35 2752 aaKnown RBP1.26□□□□□ -2.21
HMGB3P2-201ENST00000411913 H3BNG1 76 aa1.26□□□□□ -2.21
HMGB3P2-201ENST00000411913 LYSTQ99698 3801 aa1.26□□□□□ -2.21
HMGB3P2-201ENST00000411913 PDZD2O15018 2839 aa1.26□□□□□ -2.21
HMGB3P2-201ENST00000411913 CEP295Q9C0D2 2601 aa1.25□□□□□ -2.21
HMGB3P2-201ENST00000411913 TLN2Q9Y4G6 2542 aa1.25□□□□□ -2.21
HMGB3P2-201ENST00000411913 GVINP1Q7Z2Y8 2422 aa1.25□□□□□ -2.21
HMGB3P2-201ENST00000411913 A0A1B0GU69 56 aa1.25□□□□□ -2.21
HMGB3P2-201ENST00000411913 LINC00304Q8N9R0 145 aa1.25□□□□□ -2.21
HMGB3P2-201ENST00000411913 MRPL34Q9BQ48 92 aaKnown RBP1.25□□□□□ -2.21
HMGB3P2-201ENST00000411913 FLNAP21333 2647 aaKnown RBP1.25□□□□□ -2.21
HMGB3P2-201ENST00000411913 ZFYVE26Q68DK2 2539 aa1.25□□□□□ -2.21
HMGB3P2-201ENST00000411913 FLNCQ14315 2725 aa1.24□□□□□ -2.21
HMGB3P2-201ENST00000411913 ACACBO00763 2458 aa1.24□□□□□ -2.21
HMGB3P2-201ENST00000411913 K7EIL1 84 aa1.24□□□□□ -2.21
HMGB3P2-201ENST00000411913 LINC01556Q5JQF7 62 aa1.24□□□□□ -2.21
HMGB3P2-201ENST00000411913 KRTAP13-1Q8IUC0 172 aa1.24□□□□□ -2.21
HMGB3P2-201ENST00000411913 DNAH3Q8TD57 4116 aa1.24□□□□□ -2.21
HMGB3P2-201ENST00000411913 HIVEP1P15822 2718 aa1.24□□□□□ -2.21
HMGB3P2-201ENST00000411913 NBASA2RRP1 2371 aa1.23□□□□□ -2.21
HMGB3P2-201ENST00000411913 FN1P02751 2386 aaKnown RBP1.23□□□□□ -2.21
HMGB3P2-201ENST00000411913 ACACAQ13085 2346 aa1.23□□□□□ -2.21
HMGB3P2-201ENST00000411913 DYNC2H1Q8NCM8 4307 aaKnown RBP1.23□□□□□ -2.21
HMGB3P2-201ENST00000411913 DNAH17Q9UFH2 4485 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms