RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 NDUFB1O75438 58 aa10.44□□□□□ -0.74
CDC42-204ENST00000411827 LRP2P98164 4655 aa10.43□□□□□ -0.74
CDC42-204ENST00000411827 TPRXLQ17RH7 258 aa10.41□□□□□ -0.74
CDC42-204ENST00000411827 A8MWP4 228 aa10.4□□□□□ -0.74
CDC42-204ENST00000411827 ATP5EP2Q5VTU8 51 aa10.4□□□□□ -0.74
CDC42-204ENST00000411827 CXCL6P80162 114 aa10.39□□□□□ -0.75
CDC42-204ENST00000411827 DEFB116Q30KQ4 102 aa10.39□□□□□ -0.75
CDC42-204ENST00000411827 LCE2CQ5TA81 110 aa10.39□□□□□ -0.75
CDC42-204ENST00000411827 LINC00643Q86TS7 51 aa10.37□□□□□ -0.75
CDC42-204ENST00000411827 A0A1B0GVX0 72 aa10.36□□□□□ -0.75
CDC42-204ENST00000411827 C8orf87E5RJ46 101 aa10.35□□□□□ -0.75
CDC42-204ENST00000411827 KRTAP13-3Q3SY46 172 aa10.34□□□□□ -0.75
CDC42-204ENST00000411827 DSCR10P59022 87 aa10.33□□□□□ -0.76
CDC42-204ENST00000411827 PRR15Q8IV56 129 aa10.33□□□□□ -0.76
CDC42-204ENST00000411827 LINC00313P59037 77 aa10.3□□□□□ -0.76
CDC42-204ENST00000411827 RNF213Q63HN8 5207 aa10.3□□□□□ -0.76
CDC42-204ENST00000411827 IGHV6-1A0A0B4J1U7 121 aa10.29□□□□□ -0.76
CDC42-204ENST00000411827 IGKV3D-7A0A0C4DH55 119 aa10.29□□□□□ -0.76
CDC42-204ENST00000411827 CDIP1Q9H305 208 aa10.28□□□□□ -0.76
CDC42-204ENST00000411827 K7EQZ3 153 aa10.25□□□□□ -0.77
CDC42-204ENST00000411827 C9orf92A6NGG3 77 aa10.23□□□□□ -0.77
CDC42-204ENST00000411827 C8orf17Q9NRJ1 99 aa10.23□□□□□ -0.77
CDC42-204ENST00000411827 XP32Q5T750 250 aa10.19□□□□□ -0.78
CDC42-204ENST00000411827 LPAP08519 4548 aa10.18□□□□□ -0.78
CDC42-204ENST00000411827 Q8N9L7 120 aa10.17□□□□□ -0.78
CDC42-204ENST00000411827 MMP24-AS1A0A0U1RRL7 71 aa10.16□□□□□ -0.78
CDC42-204ENST00000411827 hDV103S1A0JD37 113 aa10.16□□□□□ -0.78
CDC42-204ENST00000411827 LORP23490 312 aaPredicted RBP10.16□□□□□ -0.78
CDC42-204ENST00000411827 TMEM254Q8TBM7 123 aa10.16□□□□□ -0.78
CDC42-204ENST00000411827 IMUPQ9GZP8 106 aa10.16□□□□□ -0.78
CDC42-204ENST00000411827 Q75L30 129 aa10.15□□□□□ -0.78
CDC42-204ENST00000411827 NOTCH2NLQ7Z3S9 236 aa10.15□□□□□ -0.78
CDC42-204ENST00000411827 C20orf166-AS1Q96NR2 134 aa10.15□□□□□ -0.78
CDC42-204ENST00000411827 KRTAP16-1A8MUX0 517 aa10.14□□□□□ -0.79
CDC42-204ENST00000411827 HCG22E2RYF7 251 aa10.14□□□□□ -0.79
CDC42-204ENST00000411827 HIST1H4AP62805 103 aaKnown RBP10.14□□□□□ -0.79
CDC42-204ENST00000411827 CASC2Q6XLA1 102 aa10.14□□□□□ -0.79
CDC42-204ENST00000411827 A8MUU9 505 aa10.12□□□□□ -0.79
CDC42-204ENST00000411827 MRPL34Q9BQ48 92 aaKnown RBP10.12□□□□□ -0.79
CDC42-204ENST00000411827 SEC61BP60468 96 aaKnown RBP10.1□□□□□ -0.79
CDC42-204ENST00000411827 RPL37P61927 97 aaKnown RBP10.1□□□□□ -0.79
CDC42-204ENST00000411827 Q8N9P0 234 aaPredicted RBP10.1□□□□□ -0.79
CDC42-204ENST00000411827 WFDC13Q8IUB5 93 aa10.06□□□□□ -0.8
CDC42-204ENST00000411827 ATP11AUNQ6ZP68 121 aa10.05□□□□□ -0.8
CDC42-204ENST00000411827 MT-ATP8P03928 68 aa10.02□□□□□ -0.81
CDC42-204ENST00000411827 TP53AIP1Q9HCN2 124 aa10.01□□□□□ -0.81
CDC42-204ENST00000411827 NDUFS5O43920 106 aa9.99□□□□□ -0.81
CDC42-204ENST00000411827 A0A087WVE0 104 aa9.98□□□□□ -0.81
CDC42-204ENST00000411827 ZCCHC13Q8WW36 166 aaKnown RBP9.95□□□□□ -0.82
CDC42-204ENST00000411827 PCOTHQ58A44 107 aa9.93□□□□□ -0.82
CDC42-204ENST00000411827 SCGB1A1P11684 91 aa9.91□□□□□ -0.82
CDC42-204ENST00000411827 MUC2Q02817 5179 aa9.88□□□□□ -0.83
CDC42-204ENST00000411827 UQCRQO14949 82 aa9.87□□□□□ -0.83
CDC42-204ENST00000411827 SMIM20Q8N5G0 67 aa9.87□□□□□ -0.83
CDC42-204ENST00000411827 FAM236AA0A1B0GUQ0 79 aa9.83□□□□□ -0.84
CDC42-204ENST00000411827 FAM236BA0A1B0GV22 79 aa9.83□□□□□ -0.84
CDC42-204ENST00000411827 OCR1Q9BZK8 76 aa9.81□□□□□ -0.84
CDC42-204ENST00000411827 TRAV22A0A0B4J277 110 aa9.79□□□□□ -0.84
CDC42-204ENST00000411827 ATOX1O00244 68 aa9.79□□□□□ -0.84
CDC42-204ENST00000411827 C5orf47Q569G3 176 aa9.77□□□□□ -0.85
CDC42-204ENST00000411827 Q5W150 140 aa9.77□□□□□ -0.85
CDC42-204ENST00000411827 TRAV7A0A075B6U4 112 aa9.73□□□□□ -0.85
CDC42-204ENST00000411827 MP68P56378 58 aa9.73□□□□□ -0.85
CDC42-204ENST00000411827 SPINK7P58062 85 aa9.72□□□□□ -0.85
CDC42-204ENST00000411827 C7orf65Q6ZTY9 151 aa9.72□□□□□ -0.85
CDC42-204ENST00000411827 MUC17Q685J3 4493 aa9.71□□□□□ -0.85
CDC42-204ENST00000411827 H3BPC8 53 aa9.71□□□□□ -0.86
CDC42-204ENST00000411827 FAT4Q6V0I7 4981 aa9.7□□□□□ -0.86
CDC42-204ENST00000411827 LOC101927531A0A1B0GV80 90 aa9.7□□□□□ -0.86
CDC42-204ENST00000411827 H0Y9P7 68 aa9.7□□□□□ -0.86
CDC42-204ENST00000411827 IGKV2-30P06310 120 aa9.67□□□□□ -0.86
CDC42-204ENST00000411827 KRTAP4-1Q9BYQ7 146 aa9.66□□□□□ -0.86
CDC42-204ENST00000411827 IGKV2D-30A0A075B6S6 120 aa9.65□□□□□ -0.86
CDC42-204ENST00000411827 SERP2Q8N6R1 65 aa9.64□□□□□ -0.87
CDC42-204ENST00000411827 A0A0U1RQV1 116 aa9.63□□□□□ -0.87
CDC42-204ENST00000411827 C1orf64Q8NEQ6 169 aa9.62□□□□□ -0.87
CDC42-204ENST00000411827 CYP4F30PQ9H0H9 118 aa9.61□□□□□ -0.87
CDC42-204ENST00000411827 LINC00208Q96KT6 92 aa9.6□□□□□ -0.87
CDC42-204ENST00000411827 RBM12B-AS1Q9P1G2 102 aa9.59□□□□□ -0.87
CDC42-204ENST00000411827 HRES1P13985 223 aa9.57□□□□□ -0.88
CDC42-204ENST00000411827 MPLKIPQ8TAP9 179 aa9.54□□□□□ -0.88
CDC42-204ENST00000411827 COX7CP15954 63 aa9.51□□□□□ -0.89
CDC42-204ENST00000411827 ANAPC13Q9BS18 74 aa9.5□□□□□ -0.89
CDC42-204ENST00000411827 COX6B2Q6YFQ2 88 aa9.47□□□□□ -0.89
CDC42-204ENST00000411827 FAM236DA0A1B0GTK5 79 aa9.45□□□□□ -0.9
CDC42-204ENST00000411827 FAM236CP0DP71 79 aa9.45□□□□□ -0.9
CDC42-204ENST00000411827 C20orf197Q8N268 126 aa9.44□□□□□ -0.9
CDC42-204ENST00000411827 KLKP1Q107X0 134 aa9.43□□□□□ -0.9
CDC42-204ENST00000411827 C4orf26Q17RF5 130 aa9.41□□□□□ -0.9
CDC42-204ENST00000411827 KRTAP19-2Q3LHN2 52 aa9.4□□□□□ -0.9
CDC42-204ENST00000411827 NDUFC1O43677 76 aa9.38□□□□□ -0.91
CDC42-204ENST00000411827 SNURFQ9Y675 71 aa9.37□□□□□ -0.91
CDC42-204ENST00000411827 A8MUN3 132 aa9.36□□□□□ -0.91
CDC42-204ENST00000411827 H1FX-AS1Q4G0G2 97 aa9.34□□□□□ -0.91
CDC42-204ENST00000411827 KRTAP9-2Q9BYQ4 174 aa9.33□□□□□ -0.92
CDC42-204ENST00000411827 SPANXA2-OT1Q8N9U9 137 aa9.29□□□□□ -0.92
CDC42-204ENST00000411827 KRTAP3-1Q9BYR8 98 aa9.25□□□□□ -0.93
CDC42-204ENST00000411827 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
CDC42-204ENST00000411827 CCDC179H3BU77 68 aa9.2□□□□□ -0.94
CDC42-204ENST00000411827 MT1HP80294 61 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms