RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 CHD9Q3L8U1 2897 aa6.5□□□□□ -1.37
PRPF40A-202ENST00000410080 ADGRG4Q8IZF6 3080 aa6.5□□□□□ -1.37
PRPF40A-202ENST00000410080 UTP20O75691 2785 aaKnown RBP6.49□□□□□ -1.37
PRPF40A-202ENST00000410080 LOC400499M0QZD8 3231 aa6.48□□□□□ -1.37
PRPF40A-202ENST00000410080 IGSF10Q6WRI0 2623 aa6.46□□□□□ -1.37
PRPF40A-202ENST00000410080 NDUFAF8A1L188 74 aa6.46□□□□□ -1.38
PRPF40A-202ENST00000410080 DCHS1Q96JQ0 3298 aa6.45□□□□□ -1.38
PRPF40A-202ENST00000410080 C10orf95Q9H7T3 257 aa6.44□□□□□ -1.38
PRPF40A-202ENST00000410080 EYSQ5T1H1 3165 aa6.44□□□□□ -1.38
PRPF40A-202ENST00000410080 A8MU10 97 aa6.42□□□□□ -1.38
PRPF40A-202ENST00000410080 TNP1P09430 55 aa6.41□□□□□ -1.38
PRPF40A-202ENST00000410080 UBR5O95071 2799 aaPredicted RBP6.39□□□□□ -1.39
PRPF40A-202ENST00000410080 A0A1B0GVY2 172 aa6.39□□□□□ -1.39
PRPF40A-202ENST00000410080 KRTAP10-8P60410 259 aa6.38□□□□□ -1.39
PRPF40A-202ENST00000410080 ZFHX4Q86UP3 3567 aa6.37□□□□□ -1.39
PRPF40A-202ENST00000410080 NOTCH2NLQ7Z3S9 236 aa6.37□□□□□ -1.39
PRPF40A-202ENST00000410080 KRTAP11-1Q8IUC1 163 aa6.35□□□□□ -1.39
PRPF40A-202ENST00000410080 SPENQ96T58 3664 aaKnown RBP6.33□□□□□ -1.4
PRPF40A-202ENST00000410080 DMXL1Q9Y485 3027 aa6.33□□□□□ -1.4
PRPF40A-202ENST00000410080 RELNP78509 3460 aa6.32□□□□□ -1.4
PRPF40A-202ENST00000410080 TACC2O95359 2948 aa6.32□□□□□ -1.4
PRPF40A-202ENST00000410080 KRTAP4-16G5E9R7 235 aaPredicted RBP6.3□□□□□ -1.4
PRPF40A-202ENST00000410080 TNRC18O15417 2968 aaPredicted RBP6.29□□□□□ -1.4
PRPF40A-202ENST00000410080 HIVEP1P15822 2718 aa6.29□□□□□ -1.4
PRPF40A-202ENST00000410080 RPS29P62273 56 aaKnown RBP6.28□□□□□ -1.4
PRPF40A-202ENST00000410080 P0C880 135 aa6.28□□□□□ -1.4
PRPF40A-202ENST00000410080 ITPR1Q14643 2758 aa6.27□□□□□ -1.41
PRPF40A-202ENST00000410080 KRTAP25-1Q3LHN0 102 aa6.27□□□□□ -1.41
PRPF40A-202ENST00000410080 CSMD1Q96PZ7 3565 aa6.24□□□□□ -1.41
PRPF40A-202ENST00000410080 TENM1Q9UKZ4 2725 aa6.24□□□□□ -1.41
PRPF40A-202ENST00000410080 CELSR1Q9NYQ6 3014 aa6.23□□□□□ -1.41
PRPF40A-202ENST00000410080 Q6ZRN7 208 aaPredicted RBP6.23□□□□□ -1.41
PRPF40A-202ENST00000410080 ASB16-AS1Q495Z4 193 aa6.21□□□□□ -1.42
PRPF40A-202ENST00000410080 CELSR2Q9HCU4 2923 aa6.2□□□□□ -1.42
PRPF40A-202ENST00000410080 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
PRPF40A-202ENST00000410080 NBEAQ8NFP9 2946 aa6.19□□□□□ -1.42
PRPF40A-202ENST00000410080 KRTAP29-1A8MX34 341 aaPredicted RBP6.19□□□□□ -1.42
PRPF40A-202ENST00000410080 KRTAP13-2Q52LG2 175 aa6.19□□□□□ -1.42
PRPF40A-202ENST00000410080 PRO2289Q9P1D8 64 aa6.18□□□□□ -1.42
PRPF40A-202ENST00000410080 KRTAP7-1Q8IUC3 87 aa6.18□□□□□ -1.42
PRPF40A-202ENST00000410080 SMG1Q96Q15 3661 aaKnown RBP6.16□□□□□ -1.42
PRPF40A-202ENST00000410080 DMDP11532 3685 aa6.1□□□□□ -1.43
PRPF40A-202ENST00000410080 FLNCQ14315 2725 aa6.09□□□□□ -1.43
PRPF40A-202ENST00000410080 A6NN06 94 aa6.09□□□□□ -1.43
PRPF40A-202ENST00000410080 ZFHX3Q15911 3703 aa6.08□□□□□ -1.44
PRPF40A-202ENST00000410080 NF1P21359 2839 aa6.07□□□□□ -1.44
PRPF40A-202ENST00000410080 PP632Q6XCG6 107 aa6.04□□□□□ -1.44
PRPF40A-202ENST00000410080 KRTAP13-1Q8IUC0 172 aa6.04□□□□□ -1.44
PRPF40A-202ENST00000410080 KRTAP21-3Q3LHN1 58 aa6.02□□□□□ -1.44
PRPF40A-202ENST00000410080 XP32Q5T750 250 aa6.02□□□□□ -1.45
PRPF40A-202ENST00000410080 DCHS2Q6V1P9 2916 aa6.01□□□□□ -1.45
PRPF40A-202ENST00000410080 NIPBLQ6KC79 2804 aaeCLIP5.99□□□□□ -1.45
PRPF40A-202ENST00000410080 FBN2P35556 2912 aa5.94□□□□□ -1.46
PRPF40A-202ENST00000410080 ZANQ9Y493 2812 aa5.93□□□□□ -1.46
PRPF40A-202ENST00000410080 TENM3Q9P273 2699 aa5.93□□□□□ -1.46
PRPF40A-202ENST00000410080 VWFP04275 2813 aa5.91□□□□□ -1.46
PRPF40A-202ENST00000410080 TPRXLQ17RH7 258 aa5.9□□□□□ -1.47
PRPF40A-202ENST00000410080 CUBNO60494 3623 aa5.88□□□□□ -1.47
PRPF40A-202ENST00000410080 PKD1L1Q8TDX9 2849 aa5.87□□□□□ -1.47
PRPF40A-202ENST00000410080 TGP01266 2768 aa5.86□□□□□ -1.47
PRPF40A-202ENST00000410080 SVEP1Q4LDE5 3571 aa5.86□□□□□ -1.47
PRPF40A-202ENST00000410080 VPS13CQ709C8 3753 aa5.85□□□□□ -1.47
PRPF40A-202ENST00000410080 TENM4Q6N022 2769 aa5.85□□□□□ -1.47
PRPF40A-202ENST00000410080 SRRM2Q9UQ35 2752 aaKnown RBP5.84□□□□□ -1.47
PRPF40A-202ENST00000410080 KRTAP1-4P0C5Y4 121 aa5.82□□□□□ -1.48
PRPF40A-202ENST00000410080 PDZD2O15018 2839 aa5.81□□□□□ -1.48
PRPF40A-202ENST00000410080 TENM2Q9NT68 2774 aa5.81□□□□□ -1.48
PRPF40A-202ENST00000410080 H0YAA0 97 aa5.8□□□□□ -1.48
PRPF40A-202ENST00000410080 CSMD2Q7Z408 3487 aa5.78□□□□□ -1.48
PRPF40A-202ENST00000410080 MUC3AQ02505 3323 aa5.76□□□□□ -1.49
PRPF40A-202ENST00000410080 MXRA5Q9NR99 2828 aa5.76□□□□□ -1.49
PRPF40A-202ENST00000410080 HRNRQ86YZ3 2850 aaPredicted RBP5.74□□□□□ -1.49
PRPF40A-202ENST00000410080 KRTAP13-3Q3SY46 172 aa5.71□□□□□ -1.5
PRPF40A-202ENST00000410080 BSNQ9UPA5 3926 aa5.65□□□□□ -1.5
PRPF40A-202ENST00000410080 CSMD3Q7Z407 3707 aa5.65□□□□□ -1.51
PRPF40A-202ENST00000410080 KRTAP12-2P59991 146 aa5.64□□□□□ -1.51
PRPF40A-202ENST00000410080 MEGF8Q7Z7M0 2845 aa5.63□□□□□ -1.51
PRPF40A-202ENST00000410080 TRRAPQ9Y4A5 3859 aa5.63□□□□□ -1.51
PRPF40A-202ENST00000410080 COL7A1Q02388 2944 aa5.61□□□□□ -1.51
PRPF40A-202ENST00000410080 AKAP9Q99996 3911 aa5.59□□□□□ -1.51
PRPF40A-202ENST00000410080 CRCT1Q9UGL9 99 aa5.58□□□□□ -1.52
PRPF40A-202ENST00000410080 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
PRPF40A-202ENST00000410080 OTOGQ6ZRI0 2925 aa5.48□□□□□ -1.53
PRPF40A-202ENST00000410080 KRTAP13-4Q3LI77 160 aa5.46□□□□□ -1.54
PRPF40A-202ENST00000410080 ANK3Q12955 4377 aaKnown RBP5.4□□□□□ -1.55
PRPF40A-202ENST00000410080 KRTAP12-1P59990 96 aa5.33□□□□□ -1.56
PRPF40A-202ENST00000410080 FBN1P35555 2871 aaKnown RBP5.29□□□□□ -1.56
PRPF40A-202ENST00000410080 ZNF469Q96JG9 3925 aaPredicted RBP5.28□□□□□ -1.56
PRPF40A-202ENST00000410080 FBN3Q75N90 2809 aa5.27□□□□□ -1.57
PRPF40A-202ENST00000410080 HUWE1Q7Z6Z7 4374 aaKnown RBP5.2□□□□□ -1.58
PRPF40A-202ENST00000410080 KRTAP10-12P60413 245 aa5.2□□□□□ -1.58
PRPF40A-202ENST00000410080 KRTAP3-1Q9BYR8 98 aa5.17□□□□□ -1.58
PRPF40A-202ENST00000410080 ALMS1Q8TCU4 4167 aa5.13□□□□□ -1.59
PRPF40A-202ENST00000410080 LYSTQ99698 3801 aa5.12□□□□□ -1.59
PRPF40A-202ENST00000410080 FRAS1Q86XX4 4008 aa5.11□□□□□ -1.59
PRPF40A-202ENST00000410080 KRTAP4-5Q9BYR2 181 aa5.06□□□□□ -1.6
PRPF40A-202ENST00000410080 LORP23490 312 aaPredicted RBP5.04□□□□□ -1.6
PRPF40A-202ENST00000410080 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
PRPF40A-202ENST00000410080 INE1O15225 51 aa5.03□□□□□ -1.6
PRPF40A-202ENST00000410080 CMYA5Q8N3K9 4069 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms