RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 DNAH6Q9C0G6 4158 aa9.41□□□□□ -0.9
HOXD3-202ENST00000410016 IGLV7-43P04211 117 aa9.41□□□□□ -0.9
HOXD3-202ENST00000410016 DNAH11Q96DT5 4516 aa9.4□□□□□ -0.91
HOXD3-202ENST00000410016 A0A087X002 238 aa9.39□□□□□ -0.91
HOXD3-202ENST00000410016 NOTCH2NLQ7Z3S9 236 aa9.39□□□□□ -0.91
HOXD3-202ENST00000410016 ALMS1Q8TCU4 4167 aa9.39□□□□□ -0.91
HOXD3-202ENST00000410016 DNAH5Q8TE73 4624 aa9.37□□□□□ -0.91
HOXD3-202ENST00000410016 IGLV7-46A0A075B6I9 117 aa9.36□□□□□ -0.91
HOXD3-202ENST00000410016 CDK2AP2O75956 126 aa9.36□□□□□ -0.91
HOXD3-202ENST00000410016 ATP11AUNQ6ZP68 121 aa9.35□□□□□ -0.91
HOXD3-202ENST00000410016 MRPL34Q9BQ48 92 aaKnown RBP9.35□□□□□ -0.91
HOXD3-202ENST00000410016 LY6G6CO95867 125 aa9.34□□□□□ -0.91
HOXD3-202ENST00000410016 PSPHP1O15172 72 aa9.32□□□□□ -0.92
HOXD3-202ENST00000410016 KRTAP10-2P60368 255 aa9.32□□□□□ -0.92
HOXD3-202ENST00000410016 CIRBP-AS1Q8TBR5 109 aa9.32□□□□□ -0.92
HOXD3-202ENST00000410016 PCOTHQ58A44 107 aa9.31□□□□□ -0.92
HOXD3-202ENST00000410016 Q5VV11 94 aa9.28□□□□□ -0.92
HOXD3-202ENST00000410016 SPINK6Q6UWN8 80 aa9.28□□□□□ -0.92
HOXD3-202ENST00000410016 SSBP3-AS1Q7Z2R9 100 aa9.28□□□□□ -0.92
HOXD3-202ENST00000410016 Q8N9P0 234 aaPredicted RBP9.28□□□□□ -0.92
HOXD3-202ENST00000410016 LIMD2Q9BT23 127 aa9.27□□□□□ -0.93
HOXD3-202ENST00000410016 LRP1BQ9NZR2 4599 aa9.27□□□□□ -0.93
HOXD3-202ENST00000410016 COA5Q86WW8 74 aa9.27□□□□□ -0.93
HOXD3-202ENST00000410016 A6NN06 94 aa9.26□□□□□ -0.93
HOXD3-202ENST00000410016 A8MUN3 132 aa9.26□□□□□ -0.93
HOXD3-202ENST00000410016 KRTAP13-3Q3SY46 172 aa9.23□□□□□ -0.93
HOXD3-202ENST00000410016 Q5W150 140 aa9.23□□□□□ -0.93
HOXD3-202ENST00000410016 C7orf65Q6ZTY9 151 aa9.23□□□□□ -0.93
HOXD3-202ENST00000410016 PKD1P98161 4303 aa9.23□□□□□ -0.93
HOXD3-202ENST00000410016 Q6ZSA8 131 aa9.22□□□□□ -0.93
HOXD3-202ENST00000410016 C8orf87E5RJ46 101 aa9.22□□□□□ -0.93
HOXD3-202ENST00000410016 LCA10Q71F78 164 aa9.22□□□□□ -0.93
HOXD3-202ENST00000410016 FAT2Q9NYQ8 4349 aa9.21□□□□□ -0.93
HOXD3-202ENST00000410016 KRTAP10-1P60331 282 aa9.2□□□□□ -0.94
HOXD3-202ENST00000410016 KRTAP13-2Q52LG2 175 aa9.2□□□□□ -0.94
HOXD3-202ENST00000410016 HYDINQ4G0P3 5121 aa9.18□□□□□ -0.94
HOXD3-202ENST00000410016 CHKB-CPT1BH3BT56 60 aa9.18□□□□□ -0.94
HOXD3-202ENST00000410016 Q75L30 129 aa9.17□□□□□ -0.94
HOXD3-202ENST00000410016 LOC101927531A0A1B0GV80 90 aa9.17□□□□□ -0.94
HOXD3-202ENST00000410016 HRES1P13985 223 aa9.15□□□□□ -0.95
HOXD3-202ENST00000410016 A8MU10 97 aa9.14□□□□□ -0.95
HOXD3-202ENST00000410016 VPS13BQ7Z7G8 4022 aa9.14□□□□□ -0.95
HOXD3-202ENST00000410016 CDC42SE1Q9NRR8 79 aa9.13□□□□□ -0.95
HOXD3-202ENST00000410016 H3BS24 57 aa9.13□□□□□ -0.95
HOXD3-202ENST00000410016 SPTSSBQ8NFR3 76 aa9.13□□□□□ -0.95
HOXD3-202ENST00000410016 PRR15LQ9BU68 103 aa9.13□□□□□ -0.95
HOXD3-202ENST00000410016 LINC00313P59037 77 aa9.12□□□□□ -0.95
HOXD3-202ENST00000410016 KRTAP1-4P0C5Y4 121 aa9.12□□□□□ -0.95
HOXD3-202ENST00000410016 SPAG11AQ6PDA7 123 aa9.07□□□□□ -0.96
HOXD3-202ENST00000410016 LINC01558Q9Y6Z2 57 aa9.07□□□□□ -0.96
HOXD3-202ENST00000410016 KRTAP16-1A8MUX0 517 aa9.05□□□□□ -0.96
HOXD3-202ENST00000410016 A6NED7 52 aa9.04□□□□□ -0.96
HOXD3-202ENST00000410016 FAM229AH3BQW9 127 aa9.04□□□□□ -0.96
HOXD3-202ENST00000410016 KRTAP21-3Q3LHN1 58 aa8.99□□□□□ -0.97
HOXD3-202ENST00000410016 PRR26Q8N8Z3 221 aa8.99□□□□□ -0.97
HOXD3-202ENST00000410016 RETNLBQ9BQ08 111 aa8.99□□□□□ -0.97
HOXD3-202ENST00000410016 PLA2G1BP04054 148 aaKnown RBP8.99□□□□□ -0.97
HOXD3-202ENST00000410016 IGKV2-30P06310 120 aa8.98□□□□□ -0.97
HOXD3-202ENST00000410016 ACYP2P14621 99 aa8.98□□□□□ -0.97
HOXD3-202ENST00000410016 PKHD1P08F94 4074 aa8.98□□□□□ -0.97
HOXD3-202ENST00000410016 DMAC1Q96GE9 116 aa8.98□□□□□ -0.97
HOXD3-202ENST00000410016 TYMSOSQ8TAI1 123 aa8.94□□□□□ -0.98
HOXD3-202ENST00000410016 LINC01554Q52M75 96 aa8.93□□□□□ -0.98
HOXD3-202ENST00000410016 SPINK1P00995 79 aa8.92□□□□□ -0.98
HOXD3-202ENST00000410016 SACSQ9NZJ4 4579 aa8.91□□□□□ -0.98
HOXD3-202ENST00000410016 SPINK7P58062 85 aa8.88□□□□□ -0.99
HOXD3-202ENST00000410016 IGKV2D-30A0A075B6S6 120 aa8.84□□□□□ -0.99
HOXD3-202ENST00000410016 DYNC1H1Q14204 4646 aaKnown RBP8.83□□□□□ -1
HOXD3-202ENST00000410016 RPS29P62273 56 aaKnown RBP8.81□□□□□ -1
HOXD3-202ENST00000410016 LINC00304Q8N9R0 145 aa8.81□□□□□ -1
HOXD3-202ENST00000410016 FAT1Q14517 4588 aa8.78□□□□□ -1
HOXD3-202ENST00000410016 SMR3BP02814 79 aaPredicted RBP8.77□□□□□ -1.01
HOXD3-202ENST00000410016 PKHD1L1Q86WI1 4243 aa8.73□□□□□ -1.01
HOXD3-202ENST00000410016 APOBP04114 4563 aaKnown RBP8.73□□□□□ -1.01
HOXD3-202ENST00000410016 KRTAP10-4P60372 401 aaPredicted RBP8.73□□□□□ -1.01
HOXD3-202ENST00000410016 A0A1B0GVY2 172 aa8.72□□□□□ -1.01
HOXD3-202ENST00000410016 A0A1B0GU69 56 aa8.71□□□□□ -1.01
HOXD3-202ENST00000410016 PRAC1Q96KF2 57 aa8.7□□□□□ -1.02
HOXD3-202ENST00000410016 C20orf166-AS1Q96NR2 134 aa8.64□□□□□ -1.03
HOXD3-202ENST00000410016 A8MUU9 505 aa8.64□□□□□ -1.03
HOXD3-202ENST00000410016 Q8N1X5 172 aa8.64□□□□□ -1.03
HOXD3-202ENST00000410016 C9orf92A6NGG3 77 aa8.63□□□□□ -1.03
HOXD3-202ENST00000410016 SPATA8Q6RVD6 105 aa8.61□□□□□ -1.03
HOXD3-202ENST00000410016 ADM2Q7Z4H4 148 aa8.57□□□□□ -1.04
HOXD3-202ENST00000410016 RYR2Q92736 4967 aa8.57□□□□□ -1.04
HOXD3-202ENST00000410016 UQCR11O14957 56 aa8.56□□□□□ -1.04
HOXD3-202ENST00000410016 MIR22HGQ0VDD5 57 aa8.54□□□□□ -1.04
HOXD3-202ENST00000410016 KRTAP3-1Q9BYR8 98 aa8.53□□□□□ -1.04
HOXD3-202ENST00000410016 KMT2CQ8NEZ4 4911 aaKnown RBP8.53□□□□□ -1.04
HOXD3-202ENST00000410016 FLG2Q5D862 2391 aaPredicted RBP8.49□□□□□ -1.05
HOXD3-202ENST00000410016 LRP1Q07954 4544 aaKnown RBP8.45□□□□□ -1.06
HOXD3-202ENST00000410016 TNXBP22105 4242 aa8.44□□□□□ -1.06
HOXD3-202ENST00000410016 FAT3Q8TDW7 4589 aa8.44□□□□□ -1.06
HOXD3-202ENST00000410016 CSAG1Q6PB30 78 aa8.42□□□□□ -1.06
HOXD3-202ENST00000410016 KRTAP10-8P60410 259 aa8.38□□□□□ -1.07
HOXD3-202ENST00000410016 HSPG2P98160 4391 aa8.37□□□□□ -1.07
HOXD3-202ENST00000410016 COX6B2Q6YFQ2 88 aa8.35□□□□□ -1.07
HOXD3-202ENST00000410016 ROMO1P60602 79 aa8.33□□□□□ -1.08
HOXD3-202ENST00000410016 H0YAA0 97 aa8.32□□□□□ -1.08
HOXD3-202ENST00000410016 Q5VSD8 79 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms