RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 C1orf195Q5TG92 126 aa11.89□□□□□ -0.51
LIMS2-207ENST00000409808 Q96NJ1 140 aa11.89□□□□□ -0.51
LIMS2-207ENST00000409808 IGLV9-49A0A0B4J1Y8 123 aa11.88□□□□□ -0.51
LIMS2-207ENST00000409808 RYR2Q92736 4967 aa11.88□□□□□ -0.51
LIMS2-207ENST00000409808 Q6ZSA8 131 aa11.85□□□□□ -0.51
LIMS2-207ENST00000409808 LRP1BQ9NZR2 4599 aa11.84□□□□□ -0.51
LIMS2-207ENST00000409808 C8orf17Q9NRJ1 99 aa11.82□□□□□ -0.52
LIMS2-207ENST00000409808 IGLV7-46A0A075B6I9 117 aa11.8□□□□□ -0.52
LIMS2-207ENST00000409808 SEC61GP60059 68 aa11.8□□□□□ -0.52
LIMS2-207ENST00000409808 A0A1B0GVX0 72 aa11.78□□□□□ -0.52
LIMS2-207ENST00000409808 ZNF861PO60384 105 aa11.78□□□□□ -0.52
LIMS2-207ENST00000409808 CDK2AP2O75956 126 aa11.78□□□□□ -0.52
LIMS2-207ENST00000409808 PSPHP1O15172 72 aa11.76□□□□□ -0.53
LIMS2-207ENST00000409808 LIMD2Q9BT23 127 aa11.76□□□□□ -0.53
LIMS2-207ENST00000409808 A0A1B0GVY2 172 aa11.75□□□□□ -0.53
LIMS2-207ENST00000409808 DYNC1H1Q14204 4646 aaKnown RBP11.75□□□□□ -0.53
LIMS2-207ENST00000409808 IGLV7-43P04211 117 aa11.74□□□□□ -0.53
LIMS2-207ENST00000409808 IGHV6-1A0A0B4J1U7 121 aa11.72□□□□□ -0.53
LIMS2-207ENST00000409808 ANAPC11Q9NYG5 84 aa11.72□□□□□ -0.53
LIMS2-207ENST00000409808 Q8N9P0 234 aaPredicted RBP11.71□□□□□ -0.53
LIMS2-207ENST00000409808 MRPL34Q9BQ48 92 aaKnown RBP11.71□□□□□ -0.53
LIMS2-207ENST00000409808 A8MUN3 132 aa11.69□□□□□ -0.54
LIMS2-207ENST00000409808 COA5Q86WW8 74 aa11.68□□□□□ -0.54
LIMS2-207ENST00000409808 VPS13BQ7Z7G8 4022 aa11.67□□□□□ -0.54
LIMS2-207ENST00000409808 NDUFS5O43920 106 aa11.66□□□□□ -0.54
LIMS2-207ENST00000409808 Q5VV11 94 aa11.65□□□□□ -0.54
LIMS2-207ENST00000409808 CD164Q04900 197 aa11.65□□□□□ -0.54
LIMS2-207ENST00000409808 PCOTHQ58A44 107 aa11.65□□□□□ -0.54
LIMS2-207ENST00000409808 RYR3Q15413 4870 aa11.64□□□□□ -0.55
LIMS2-207ENST00000409808 APOBP04114 4563 aaKnown RBP11.6□□□□□ -0.55
LIMS2-207ENST00000409808 LOC101927531A0A1B0GV80 90 aa11.58□□□□□ -0.56
LIMS2-207ENST00000409808 SMR3BP02814 79 aaPredicted RBP11.58□□□□□ -0.56
LIMS2-207ENST00000409808 SSBP3-AS1Q7Z2R9 100 aa11.58□□□□□ -0.56
LIMS2-207ENST00000409808 PRR15LQ9BU68 103 aa11.57□□□□□ -0.56
LIMS2-207ENST00000409808 PMAIP1Q13794 54 aa11.57□□□□□ -0.56
LIMS2-207ENST00000409808 A0A087X002 238 aa11.55□□□□□ -0.56
LIMS2-207ENST00000409808 CHKB-CPT1BH3BT56 60 aa11.55□□□□□ -0.56
LIMS2-207ENST00000409808 NOTCH2NLQ7Z3S9 236 aa11.55□□□□□ -0.56
LIMS2-207ENST00000409808 Q75L30 129 aa11.54□□□□□ -0.56
LIMS2-207ENST00000409808 C8orf87E5RJ46 101 aa11.54□□□□□ -0.56
LIMS2-207ENST00000409808 FAT1Q14517 4588 aa11.52□□□□□ -0.56
LIMS2-207ENST00000409808 LINC01558Q9Y6Z2 57 aa11.51□□□□□ -0.57
LIMS2-207ENST00000409808 SPINK6Q6UWN8 80 aa11.5□□□□□ -0.57
LIMS2-207ENST00000409808 HRES1P13985 223 aa11.48□□□□□ -0.57
LIMS2-207ENST00000409808 KRTAP13-3Q3SY46 172 aa11.48□□□□□ -0.57
LIMS2-207ENST00000409808 A8MU10 97 aa11.45□□□□□ -0.58
LIMS2-207ENST00000409808 Q5W150 140 aa11.44□□□□□ -0.58
LIMS2-207ENST00000409808 KRTAP1-4P0C5Y4 121 aa11.43□□□□□ -0.58
LIMS2-207ENST00000409808 KRTAP13-2Q52LG2 175 aa11.41□□□□□ -0.58
LIMS2-207ENST00000409808 SPAG11AQ6PDA7 123 aa11.41□□□□□ -0.58
LIMS2-207ENST00000409808 A6NED7 52 aa11.4□□□□□ -0.59
LIMS2-207ENST00000409808 LINC00313P59037 77 aa11.38□□□□□ -0.59
LIMS2-207ENST00000409808 KRTAP10-4P60372 401 aaPredicted RBP11.37□□□□□ -0.59
LIMS2-207ENST00000409808 ATP11AUNQ6ZP68 121 aa11.36□□□□□ -0.59
LIMS2-207ENST00000409808 FAM229AH3BQW9 127 aa11.36□□□□□ -0.59
LIMS2-207ENST00000409808 PLA2G1BP04054 148 aaKnown RBP11.36□□□□□ -0.59
LIMS2-207ENST00000409808 ACYP2P14621 99 aa11.36□□□□□ -0.59
LIMS2-207ENST00000409808 LCA10Q71F78 164 aa11.34□□□□□ -0.59
LIMS2-207ENST00000409808 CDC42SE1Q9NRR8 79 aa11.34□□□□□ -0.59
LIMS2-207ENST00000409808 HSPG2P98160 4391 aa11.32□□□□□ -0.6
LIMS2-207ENST00000409808 DMAC1Q96GE9 116 aa11.27□□□□□ -0.6
LIMS2-207ENST00000409808 PRR26Q8N8Z3 221 aa11.26□□□□□ -0.61
LIMS2-207ENST00000409808 IGKV2-30P06310 120 aa11.24□□□□□ -0.61
LIMS2-207ENST00000409808 SPTSSBQ8NFR3 76 aa11.24□□□□□ -0.61
LIMS2-207ENST00000409808 TYMSOSQ8TAI1 123 aa11.24□□□□□ -0.61
LIMS2-207ENST00000409808 EPPK1P58107 5090 aaKnown RBP11.23□□□□□ -0.61
LIMS2-207ENST00000409808 KRTAP17-1Q9BYP8 105 aa11.2□□□□□ -0.62
LIMS2-207ENST00000409808 KRTAP16-1A8MUX0 517 aa11.2□□□□□ -0.62
LIMS2-207ENST00000409808 RYR1P21817 5038 aa11.19□□□□□ -0.62
LIMS2-207ENST00000409808 SPINK7P58062 85 aa11.18□□□□□ -0.62
LIMS2-207ENST00000409808 Q5VSD8 79 aa11.17□□□□□ -0.62
LIMS2-207ENST00000409808 KIAA1109Q2LD37 5005 aa11.17□□□□□ -0.62
LIMS2-207ENST00000409808 KTN1-AS1Q86SY8 53 aa11.17□□□□□ -0.62
LIMS2-207ENST00000409808 PKHD1L1Q86WI1 4243 aa11.16□□□□□ -0.62
LIMS2-207ENST00000409808 A6NN06 94 aa11.14□□□□□ -0.63
LIMS2-207ENST00000409808 C4orf48Q5BLP8 95 aa11.13□□□□□ -0.63
LIMS2-207ENST00000409808 RBM12B-AS1Q9P1G2 102 aa11.13□□□□□ -0.63
LIMS2-207ENST00000409808 RETNLBQ9BQ08 111 aa11.12□□□□□ -0.63
LIMS2-207ENST00000409808 SPINK1P00995 79 aa11.09□□□□□ -0.63
LIMS2-207ENST00000409808 LRP1Q07954 4544 aaKnown RBP11.09□□□□□ -0.63
LIMS2-207ENST00000409808 LINC00304Q8N9R0 145 aa11.08□□□□□ -0.64
LIMS2-207ENST00000409808 A0A1B0GU69 56 aa11.03□□□□□ -0.64
LIMS2-207ENST00000409808 IGKV2D-30A0A075B6S6 120 aa11.01□□□□□ -0.65
LIMS2-207ENST00000409808 RPS29P62273 56 aaKnown RBP11□□□□□ -0.65
LIMS2-207ENST00000409808 FLG2Q5D862 2391 aaPredicted RBP10.99□□□□□ -0.65
LIMS2-207ENST00000409808 TNXBP22105 4242 aa10.97□□□□□ -0.65
LIMS2-207ENST00000409808 C7orf65Q6ZTY9 151 aa10.96□□□□□ -0.65
LIMS2-207ENST00000409808 Q8N1X5 172 aa10.96□□□□□ -0.65
LIMS2-207ENST00000409808 FAT3Q8TDW7 4589 aa10.94□□□□□ -0.66
LIMS2-207ENST00000409808 SPATA8Q6RVD6 105 aa10.92□□□□□ -0.66
LIMS2-207ENST00000409808 MYCBP2O75592 4640 aa10.91□□□□□ -0.66
LIMS2-207ENST00000409808 KRTAP10-8P60410 259 aa10.9□□□□□ -0.67
LIMS2-207ENST00000409808 UQCR11O14957 56 aa10.87□□□□□ -0.67
LIMS2-207ENST00000409808 KRTAP4-5Q9BYR2 181 aa10.84□□□□□ -0.67
LIMS2-207ENST00000409808 MIR22HGQ0VDD5 57 aa10.83□□□□□ -0.68
LIMS2-207ENST00000409808 DMBT1Q9UGM3 2413 aaPredicted RBP10.8□□□□□ -0.68
LIMS2-207ENST00000409808 MT1HL1P0DM35 61 aa10.76□□□□□ -0.69
LIMS2-207ENST00000409808 C9orf92A6NGG3 77 aa10.73□□□□□ -0.69
LIMS2-207ENST00000409808 A8MUU9 505 aa10.73□□□□□ -0.69
LIMS2-207ENST00000409808 C20orf166-AS1Q96NR2 134 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms