RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 ASB16-AS1Q495Z4 193 aa7.11□□□□□ -1.27
CHMP3-204ENST00000409727 Q5XG85 94 aa7.11□□□□□ -1.27
CHMP3-204ENST00000409727 KRTAP10-8P60410 259 aa7.1□□□□□ -1.27
CHMP3-204ENST00000409727 LRP1Q07954 4544 aaKnown RBP7.09□□□□□ -1.27
CHMP3-204ENST00000409727 IGHV6-1A0A0B4J1U7 121 aa7.09□□□□□ -1.27
CHMP3-204ENST00000409727 NDUFB1O75438 58 aa7.09□□□□□ -1.27
CHMP3-204ENST00000409727 PRR15Q8IV56 129 aa7.09□□□□□ -1.27
CHMP3-204ENST00000409727 WFDC13Q8IUB5 93 aa7.07□□□□□ -1.28
CHMP3-204ENST00000409727 RPS29P62273 56 aaKnown RBP7.07□□□□□ -1.28
CHMP3-204ENST00000409727 RETNLBQ9BQ08 111 aa7.06□□□□□ -1.28
CHMP3-204ENST00000409727 A0A1B0GVX0 72 aa7.05□□□□□ -1.28
CHMP3-204ENST00000409727 HCG22E2RYF7 251 aa7.05□□□□□ -1.28
CHMP3-204ENST00000409727 BIRC6Q9NR09 4857 aa7.05□□□□□ -1.28
CHMP3-204ENST00000409727 MT1HL1P0DM35 61 aa7.04□□□□□ -1.28
CHMP3-204ENST00000409727 NOTCH2NLQ7Z3S9 236 aa7.03□□□□□ -1.28
CHMP3-204ENST00000409727 ANAPC13Q9BS18 74 aa7.03□□□□□ -1.28
CHMP3-204ENST00000409727 MYCBP2O75592 4640 aa7.03□□□□□ -1.28
CHMP3-204ENST00000409727 MMP24-AS1A0A0U1RRL7 71 aa7.02□□□□□ -1.29
CHMP3-204ENST00000409727 CASC2Q6XLA1 102 aa7.02□□□□□ -1.29
CHMP3-204ENST00000409727 C8orf17Q9NRJ1 99 aa7.02□□□□□ -1.29
CHMP3-204ENST00000409727 ATOX1O00244 68 aa7.01□□□□□ -1.29
CHMP3-204ENST00000409727 OXTP01178 125 aa7□□□□□ -1.29
CHMP3-204ENST00000409727 TNXBP22105 4242 aa6.99□□□□□ -1.29
CHMP3-204ENST00000409727 hDV103S1A0JD37 113 aa6.99□□□□□ -1.29
CHMP3-204ENST00000409727 FAT3Q8TDW7 4589 aa6.99□□□□□ -1.29
CHMP3-204ENST00000409727 KRTAP29-1A8MX34 341 aaPredicted RBP6.98□□□□□ -1.29
CHMP3-204ENST00000409727 LINC00313P59037 77 aa6.96□□□□□ -1.29
CHMP3-204ENST00000409727 DMBT1Q9UGM3 2413 aaPredicted RBP6.96□□□□□ -1.3
CHMP3-204ENST00000409727 C8orf87E5RJ46 101 aa6.94□□□□□ -1.3
CHMP3-204ENST00000409727 HERC2O95714 4834 aa6.94□□□□□ -1.3
CHMP3-204ENST00000409727 NDUFS5O43920 106 aa6.94□□□□□ -1.3
CHMP3-204ENST00000409727 ABCA13Q86UQ4 5058 aa6.93□□□□□ -1.3
CHMP3-204ENST00000409727 C9orf92A6NGG3 77 aa6.93□□□□□ -1.3
CHMP3-204ENST00000409727 SERP2Q8N6R1 65 aa6.92□□□□□ -1.3
CHMP3-204ENST00000409727 MRPL34Q9BQ48 92 aaKnown RBP6.92□□□□□ -1.3
CHMP3-204ENST00000409727 OCR1Q9BZK8 76 aa6.92□□□□□ -1.3
CHMP3-204ENST00000409727 TMEM254Q8TBM7 123 aa6.92□□□□□ -1.3
CHMP3-204ENST00000409727 TRAV7A0A075B6U4 112 aa6.91□□□□□ -1.3
CHMP3-204ENST00000409727 SMIM20Q8N5G0 67 aa6.9□□□□□ -1.3
CHMP3-204ENST00000409727 CCDC179H3BU77 68 aa6.89□□□□□ -1.31
CHMP3-204ENST00000409727 COX7CP15954 63 aa6.89□□□□□ -1.31
CHMP3-204ENST00000409727 KRTAP16-1A8MUX0 517 aa6.87□□□□□ -1.31
CHMP3-204ENST00000409727 PRR4Q16378 134 aa6.87□□□□□ -1.31
CHMP3-204ENST00000409727 IGLV7-46A0A075B6I9 117 aa6.85□□□□□ -1.31
CHMP3-204ENST00000409727 H3BS24 57 aa6.85□□□□□ -1.31
CHMP3-204ENST00000409727 UQCRQO14949 82 aa6.85□□□□□ -1.31
CHMP3-204ENST00000409727 FP248Q71RG6 208 aaPredicted RBP6.85□□□□□ -1.31
CHMP3-204ENST00000409727 C20orf197Q8N268 126 aa6.83□□□□□ -1.32
CHMP3-204ENST00000409727 C5orf47Q569G3 176 aa6.83□□□□□ -1.32
CHMP3-204ENST00000409727 Q8N9P0 234 aaPredicted RBP6.83□□□□□ -1.32
CHMP3-204ENST00000409727 TP53AIP1Q9HCN2 124 aa6.82□□□□□ -1.32
CHMP3-204ENST00000409727 SNURFQ9Y675 71 aa6.81□□□□□ -1.32
CHMP3-204ENST00000409727 H0Y9P7 68 aa6.8□□□□□ -1.32
CHMP3-204ENST00000409727 TRAV22A0A0B4J277 110 aa6.79□□□□□ -1.32
CHMP3-204ENST00000409727 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
CHMP3-204ENST00000409727 Q5W150 140 aa6.79□□□□□ -1.32
CHMP3-204ENST00000409727 MP68P56378 58 aa6.78□□□□□ -1.32
CHMP3-204ENST00000409727 CYSTM1Q9H1C7 97 aa6.78□□□□□ -1.32
CHMP3-204ENST00000409727 KRTAP13-3Q3SY46 172 aa6.77□□□□□ -1.33
CHMP3-204ENST00000409727 LINC00208Q96KT6 92 aa6.77□□□□□ -1.33
CHMP3-204ENST00000409727 A0A0U1RQV1 116 aa6.76□□□□□ -1.33
CHMP3-204ENST00000409727 C20orf166-AS1Q96NR2 134 aa6.75□□□□□ -1.33
CHMP3-204ENST00000409727 A8MUU9 505 aa6.74□□□□□ -1.33
CHMP3-204ENST00000409727 PCLOQ9Y6V0 5065 aa6.74□□□□□ -1.33
CHMP3-204ENST00000409727 KLKP1Q107X0 134 aa6.73□□□□□ -1.33
CHMP3-204ENST00000409727 C1orf64Q8NEQ6 169 aa6.73□□□□□ -1.33
CHMP3-204ENST00000409727 ZCCHC13Q8WW36 166 aaKnown RBP6.7□□□□□ -1.34
CHMP3-204ENST00000409727 TPRXLQ17RH7 258 aa6.7□□□□□ -1.34
CHMP3-204ENST00000409727 Q75L30 129 aa6.7□□□□□ -1.34
CHMP3-204ENST00000409727 H3BPC8 53 aa6.68□□□□□ -1.34
CHMP3-204ENST00000409727 IGKV2D-30A0A075B6S6 120 aa6.66□□□□□ -1.34
CHMP3-204ENST00000409727 IGKV2-30P06310 120 aa6.66□□□□□ -1.34
CHMP3-204ENST00000409727 KRTAP9-2Q9BYQ4 174 aa6.66□□□□□ -1.34
CHMP3-204ENST00000409727 H7BZZ5 65 aa6.66□□□□□ -1.34
CHMP3-204ENST00000409727 RPL37P61927 97 aaKnown RBP6.66□□□□□ -1.34
CHMP3-204ENST00000409727 PCOTHQ58A44 107 aa6.66□□□□□ -1.34
CHMP3-204ENST00000409727 ATP11AUNQ6ZP68 121 aa6.65□□□□□ -1.34
CHMP3-204ENST00000409727 LOC101927531A0A1B0GV80 90 aa6.64□□□□□ -1.35
CHMP3-204ENST00000409727 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.64□□□□□ -1.35
CHMP3-204ENST00000409727 NDUFC1O43677 76 aa6.63□□□□□ -1.35
CHMP3-204ENST00000409727 LPAP08519 4548 aa6.63□□□□□ -1.35
CHMP3-204ENST00000409727 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
CHMP3-204ENST00000409727 SEC61GP60059 68 aa6.62□□□□□ -1.35
CHMP3-204ENST00000409727 CYP4F30PQ9H0H9 118 aa6.62□□□□□ -1.35
CHMP3-204ENST00000409727 KRTAP4-12Q9BQ66 201 aa6.62□□□□□ -1.35
CHMP3-204ENST00000409727 TMEM258P61165 79 aa6.58□□□□□ -1.36
CHMP3-204ENST00000409727 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
CHMP3-204ENST00000409727 C7orf65Q6ZTY9 151 aa6.58□□□□□ -1.36
CHMP3-204ENST00000409727 SPINK7P58062 85 aa6.56□□□□□ -1.36
CHMP3-204ENST00000409727 FAM236DA0A1B0GTK5 79 aa6.55□□□□□ -1.36
CHMP3-204ENST00000409727 FAM236CP0DP71 79 aa6.55□□□□□ -1.36
CHMP3-204ENST00000409727 HERC1Q15751 4861 aa6.54□□□□□ -1.36
CHMP3-204ENST00000409727 LRP2P98164 4655 aa6.54□□□□□ -1.36
CHMP3-204ENST00000409727 HRES1P13985 223 aa6.53□□□□□ -1.36
CHMP3-204ENST00000409727 C4orf26Q17RF5 130 aa6.49□□□□□ -1.37
CHMP3-204ENST00000409727 SPANXA2-OT1Q8N9U9 137 aa6.49□□□□□ -1.37
CHMP3-204ENST00000409727 SEC61BP60468 96 aaKnown RBP6.48□□□□□ -1.37
CHMP3-204ENST00000409727 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
CHMP3-204ENST00000409727 ATP5EP56381 51 aaPredicted RBP6.47□□□□□ -1.37
CHMP3-204ENST00000409727 V9GYY9 64 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms