RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 SMIM6P0DI80 62 aa9.96□□□□□ -0.82
TSPAN4-209ENST00000409543 Q6ZQT0 140 aa9.96□□□□□ -0.82
TSPAN4-209ENST00000409543 NAA38Q9BRA0 125 aaKnown RBP9.96□□□□□ -0.82
TSPAN4-209ENST00000409543 JMJD7-PLA2G4BH0Y9G9 81 aa9.94□□□□□ -0.82
TSPAN4-209ENST00000409543 LOC110117498A0A087WWA1 95 aa9.91□□□□□ -0.82
TSPAN4-209ENST00000409543 A0A1B0GW54 56 aa9.91□□□□□ -0.82
TSPAN4-209ENST00000409543 PDE6GP18545 87 aa9.89□□□□□ -0.83
TSPAN4-209ENST00000409543 MPLKIPQ8TAP9 179 aa9.88□□□□□ -0.83
TSPAN4-209ENST00000409543 NDUFB1O75438 58 aa9.87□□□□□ -0.83
TSPAN4-209ENST00000409543 HRES1P13985 223 aa9.87□□□□□ -0.83
TSPAN4-209ENST00000409543 LYRM7Q5U5X0 104 aa9.87□□□□□ -0.83
TSPAN4-209ENST00000409543 RBM12B-AS1Q9P1G2 102 aa9.86□□□□□ -0.83
TSPAN4-209ENST00000409543 FAM236DA0A1B0GTK5 79 aa9.85□□□□□ -0.83
TSPAN4-209ENST00000409543 FAM236CP0DP71 79 aa9.85□□□□□ -0.83
TSPAN4-209ENST00000409543 TSTD3H0UI37 97 aa9.84□□□□□ -0.83
TSPAN4-209ENST00000409543 ZCCHC13Q8WW36 166 aaKnown RBP9.83□□□□□ -0.84
TSPAN4-209ENST00000409543 C14orf132Q9NPU4 83 aa9.83□□□□□ -0.84
TSPAN4-209ENST00000409543 A8MWP4 228 aa9.82□□□□□ -0.84
TSPAN4-209ENST00000409543 KRTAP9-8Q9BYQ0 159 aa9.82□□□□□ -0.84
TSPAN4-209ENST00000409543 Q8N9P0 234 aaPredicted RBP9.81□□□□□ -0.84
TSPAN4-209ENST00000409543 BATFQ16520 125 aa9.8□□□□□ -0.84
TSPAN4-209ENST00000409543 C8orf17Q9NRJ1 99 aa9.79□□□□□ -0.84
TSPAN4-209ENST00000409543 IGKV3D-7A0A0C4DH55 119 aa9.77□□□□□ -0.85
TSPAN4-209ENST00000409543 SPINK7P58062 85 aa9.75□□□□□ -0.85
TSPAN4-209ENST00000409543 NREPQ16612 68 aa9.75□□□□□ -0.85
TSPAN4-209ENST00000409543 C9orf118A6NHY6 69 aa9.74□□□□□ -0.85
TSPAN4-209ENST00000409543 PRR15Q8IV56 129 aa9.72□□□□□ -0.85
TSPAN4-209ENST00000409543 MTURNQ8N3F0 131 aa9.72□□□□□ -0.85
TSPAN4-209ENST00000409543 H3BT86 120 aa9.71□□□□□ -0.86
TSPAN4-209ENST00000409543 Q6ZVQ6 151 aa9.71□□□□□ -0.86
TSPAN4-209ENST00000409543 LOC105371267A0A1B0GV96 52 aa9.7□□□□□ -0.86
TSPAN4-209ENST00000409543 TAX1BP3O14907 124 aa9.7□□□□□ -0.86
TSPAN4-209ENST00000409543 A0A1W2PPM0 123 aa9.69□□□□□ -0.86
TSPAN4-209ENST00000409543 MT2AP02795 61 aa9.67□□□□□ -0.86
TSPAN4-209ENST00000409543 MMP24-AS1A0A0U1RRL7 71 aa9.64□□□□□ -0.87
TSPAN4-209ENST00000409543 TMEM254Q8TBM7 123 aa9.63□□□□□ -0.87
TSPAN4-209ENST00000409543 MRPL34Q9BQ48 92 aaKnown RBP9.63□□□□□ -0.87
TSPAN4-209ENST00000409543 K7EQZ3 153 aa9.6□□□□□ -0.87
TSPAN4-209ENST00000409543 WFDC13Q8IUB5 93 aa9.6□□□□□ -0.87
TSPAN4-209ENST00000409543 USH2AO75445 5202 aa9.6□□□□□ -0.87
TSPAN4-209ENST00000409543 MT1FP04733 61 aa9.59□□□□□ -0.87
TSPAN4-209ENST00000409543 hDV103S1A0JD37 113 aa9.58□□□□□ -0.88
TSPAN4-209ENST00000409543 BPY2O14599 106 aa9.56□□□□□ -0.88
TSPAN4-209ENST00000409543 KRTAP10-10P60014 251 aa9.55□□□□□ -0.88
TSPAN4-209ENST00000409543 SPCS1Q9Y6A9 102 aa9.55□□□□□ -0.88
TSPAN4-209ENST00000409543 NDUFS5O43920 106 aa9.52□□□□□ -0.89
TSPAN4-209ENST00000409543 SSPOA2VEC9 5147 aa9.51□□□□□ -0.89
TSPAN4-209ENST00000409543 KRTAP9-3Q9BYQ3 159 aa9.51□□□□□ -0.89
TSPAN4-209ENST00000409543 SMCPP49901 116 aaPredicted RBP9.49□□□□□ -0.89
TSPAN4-209ENST00000409543 LCE2BO14633 110 aa9.47□□□□□ -0.89
TSPAN4-209ENST00000409543 COL5A1-AS1Q5SY13 56 aa9.45□□□□□ -0.9
TSPAN4-209ENST00000409543 Q8N9L7 120 aa9.45□□□□□ -0.9
TSPAN4-209ENST00000409543 Q5W150 140 aa9.43□□□□□ -0.9
TSPAN4-209ENST00000409543 CASC2Q6XLA1 102 aa9.43□□□□□ -0.9
TSPAN4-209ENST00000409543 H1FX-AS1Q4G0G2 97 aa9.41□□□□□ -0.9
TSPAN4-209ENST00000409543 PRO0461Q9UI25 63 aa9.41□□□□□ -0.9
TSPAN4-209ENST00000409543 IGKV2D-30A0A075B6S6 120 aa9.4□□□□□ -0.9
TSPAN4-209ENST00000409543 IGKV2-30P06310 120 aa9.4□□□□□ -0.9
TSPAN4-209ENST00000409543 C7orf65Q6ZTY9 151 aa9.39□□□□□ -0.91
TSPAN4-209ENST00000409543 HCG22E2RYF7 251 aa9.38□□□□□ -0.91
TSPAN4-209ENST00000409543 K7EP34 96 aa9.38□□□□□ -0.91
TSPAN4-209ENST00000409543 LINC00846Q9NV44 126 aa9.38□□□□□ -0.91
TSPAN4-209ENST00000409543 UBL5Q9BZL1 73 aa9.37□□□□□ -0.91
TSPAN4-209ENST00000409543 CXCL6P80162 114 aa9.34□□□□□ -0.91
TSPAN4-209ENST00000409543 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.33□□□□□ -0.92
TSPAN4-209ENST00000409543 KRTAP19-1Q8IUB9 90 aa9.32□□□□□ -0.92
TSPAN4-209ENST00000409543 FCGBPQ9Y6R7 5405 aaPredicted RBP9.3□□□□□ -0.92
TSPAN4-209ENST00000409543 GTF2H5Q6ZYL4 71 aa9.26□□□□□ -0.93
TSPAN4-209ENST00000409543 C4orf26Q17RF5 130 aa9.25□□□□□ -0.93
TSPAN4-209ENST00000409543 KRTAP9-7A8MTY7 169 aa9.22□□□□□ -0.93
TSPAN4-209ENST00000409543 F8W1H4 67 aa9.22□□□□□ -0.93
TSPAN4-209ENST00000409543 ETDBQ3ZM63 59 aa9.17□□□□□ -0.94
TSPAN4-209ENST00000409543 TP53AIP1Q9HCN2 124 aa9.16□□□□□ -0.94
TSPAN4-209ENST00000409543 KRTAP19-6Q3LI70 58 aa9.15□□□□□ -0.94
TSPAN4-209ENST00000409543 PCP4L1A6NKN8 68 aa9.14□□□□□ -0.95
TSPAN4-209ENST00000409543 KRTAP3-1Q9BYR8 98 aa9.12□□□□□ -0.95
TSPAN4-209ENST00000409543 MACF1Q9UPN3 7388 aaKnown RBP9.09□□□□□ -0.95
TSPAN4-209ENST00000409543 C1orf64Q8NEQ6 169 aa9.08□□□□□ -0.96
TSPAN4-209ENST00000409543 C5orf47Q569G3 176 aa9.07□□□□□ -0.96
TSPAN4-209ENST00000409543 S4R3F8 94 aa9.05□□□□□ -0.96
TSPAN4-209ENST00000409543 CSAG1Q6PB30 78 aa9.01□□□□□ -0.97
TSPAN4-209ENST00000409543 ACYP1P07311 99 aa9□□□□□ -0.97
TSPAN4-209ENST00000409543 SYNE2Q8WXH0 6885 aaKnown RBP8.99□□□□□ -0.97
TSPAN4-209ENST00000409543 LCA10Q71F78 164 aa8.99□□□□□ -0.97
TSPAN4-209ENST00000409543 CYP4F30PQ9H0H9 118 aa8.98□□□□□ -0.97
TSPAN4-209ENST00000409543 FAM236AA0A1B0GUQ0 79 aa8.96□□□□□ -0.98
TSPAN4-209ENST00000409543 FAM236BA0A1B0GV22 79 aa8.96□□□□□ -0.98
TSPAN4-209ENST00000409543 TRAV22A0A0B4J277 110 aa8.94□□□□□ -0.98
TSPAN4-209ENST00000409543 FAM240AA0A1B0GVK7 77 aa8.94□□□□□ -0.98
TSPAN4-209ENST00000409543 ATP5EP2Q5VTU8 51 aa8.93□□□□□ -0.98
TSPAN4-209ENST00000409543 LOC101927531A0A1B0GV80 90 aa8.91□□□□□ -0.98
TSPAN4-209ENST00000409543 HIST1H4AP62805 103 aaKnown RBP8.87□□□□□ -0.99
TSPAN4-209ENST00000409543 KRTAP3-3Q9BYR6 98 aa8.87□□□□□ -0.99
TSPAN4-209ENST00000409543 SPRR2GQ9BYE4 73 aa8.85□□□□□ -0.99
TSPAN4-209ENST00000409543 UQCRQO14949 82 aa8.84□□□□□ -0.99
TSPAN4-209ENST00000409543 A0A087WVE0 104 aa8.8□□□□□ -1
TSPAN4-209ENST00000409543 ATOX1O00244 68 aa8.8□□□□□ -1
TSPAN4-209ENST00000409543 MT1BP07438 61 aa8.8□□□□□ -1
TSPAN4-209ENST00000409543 KLKP1Q107X0 134 aa8.8□□□□□ -1
TSPAN4-209ENST00000409543 KRTAP19-8Q3LI54 63 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms