RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 IGKV4-1P06312 121 aa8.96□□□□□ -0.98
SHANK2-204ENST00000409530 Q96NJ1 140 aa8.96□□□□□ -0.98
SHANK2-204ENST00000409530 MT1HL1P0DM35 61 aa8.95□□□□□ -0.98
SHANK2-204ENST00000409530 LINC00472Q9H8W2 130 aa8.95□□□□□ -0.98
SHANK2-204ENST00000409530 CXCL6P80162 114 aa8.94□□□□□ -0.98
SHANK2-204ENST00000409530 SPAG11AQ6PDA7 123 aa8.94□□□□□ -0.98
SHANK2-204ENST00000409530 SEC61GP60059 68 aa8.92□□□□□ -0.98
SHANK2-204ENST00000409530 K7EQZ3 153 aa8.92□□□□□ -0.98
SHANK2-204ENST00000409530 DSCR10P59022 87 aa8.91□□□□□ -0.98
SHANK2-204ENST00000409530 C1orf195Q5TG92 126 aa8.9□□□□□ -0.98
SHANK2-204ENST00000409530 PCLOQ9Y6V0 5065 aa8.9□□□□□ -0.98
SHANK2-204ENST00000409530 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.98
SHANK2-204ENST00000409530 TRAV7A0A075B6U4 112 aa8.89□□□□□ -0.99
SHANK2-204ENST00000409530 OXTP01178 125 aa8.89□□□□□ -0.99
SHANK2-204ENST00000409530 PRO0628Q9UI54 55 aa8.89□□□□□ -0.99
SHANK2-204ENST00000409530 J3QL48 77 aa8.88□□□□□ -0.99
SHANK2-204ENST00000409530 C20orf197Q8N268 126 aa8.87□□□□□ -0.99
SHANK2-204ENST00000409530 Q5XG85 94 aa8.87□□□□□ -0.99
SHANK2-204ENST00000409530 IGHV6-1A0A0B4J1U7 121 aa8.86□□□□□ -0.99
SHANK2-204ENST00000409530 RPS29P62273 56 aaKnown RBP8.85□□□□□ -0.99
SHANK2-204ENST00000409530 C4orf26Q17RF5 130 aa8.85□□□□□ -0.99
SHANK2-204ENST00000409530 KRTAP29-1A8MX34 341 aaPredicted RBP8.84□□□□□ -0.99
SHANK2-204ENST00000409530 ASB16-AS1Q495Z4 193 aa8.84□□□□□ -0.99
SHANK2-204ENST00000409530 A8MWP4 228 aa8.84□□□□□ -0.99
SHANK2-204ENST00000409530 KLKP1Q107X0 134 aa8.83□□□□□ -1
SHANK2-204ENST00000409530 NDUFB1O75438 58 aa8.82□□□□□ -1
SHANK2-204ENST00000409530 H7BZZ5 65 aa8.81□□□□□ -1
SHANK2-204ENST00000409530 WFDC13Q8IUB5 93 aa8.81□□□□□ -1
SHANK2-204ENST00000409530 PRR15Q8IV56 129 aa8.8□□□□□ -1
SHANK2-204ENST00000409530 A0A1B0GVX0 72 aa8.79□□□□□ -1
SHANK2-204ENST00000409530 V9GYY9 64 aa8.79□□□□□ -1
SHANK2-204ENST00000409530 NOTCH2NLQ7Z3S9 236 aa8.78□□□□□ -1
SHANK2-204ENST00000409530 FAM236DA0A1B0GTK5 79 aa8.77□□□□□ -1.01
SHANK2-204ENST00000409530 FAM236CP0DP71 79 aa8.77□□□□□ -1.01
SHANK2-204ENST00000409530 C9orf92A6NGG3 77 aa8.76□□□□□ -1.01
SHANK2-204ENST00000409530 PRR4Q16378 134 aa8.74□□□□□ -1.01
SHANK2-204ENST00000409530 HCG22E2RYF7 251 aa8.74□□□□□ -1.01
SHANK2-204ENST00000409530 NDUFC1O43677 76 aa8.74□□□□□ -1.01
SHANK2-204ENST00000409530 C8orf17Q9NRJ1 99 aa8.74□□□□□ -1.01
SHANK2-204ENST00000409530 MMP24-AS1A0A0U1RRL7 71 aa8.73□□□□□ -1.01
SHANK2-204ENST00000409530 SNURFQ9Y675 71 aa8.73□□□□□ -1.01
SHANK2-204ENST00000409530 SERP1Q9Y6X1 66 aa8.72□□□□□ -1.01
SHANK2-204ENST00000409530 CASC2Q6XLA1 102 aa8.71□□□□□ -1.01
SHANK2-204ENST00000409530 hDV103S1A0JD37 113 aa8.69□□□□□ -1.02
SHANK2-204ENST00000409530 LINC00313P59037 77 aa8.69□□□□□ -1.02
SHANK2-204ENST00000409530 IGLV7-46A0A075B6I9 117 aa8.68□□□□□ -1.02
SHANK2-204ENST00000409530 TMEM254Q8TBM7 123 aa8.68□□□□□ -1.02
SHANK2-204ENST00000409530 OCR1Q9BZK8 76 aa8.67□□□□□ -1.02
SHANK2-204ENST00000409530 NDUFS5O43920 106 aa8.66□□□□□ -1.02
SHANK2-204ENST00000409530 ATP5EP56381 51 aaPredicted RBP8.65□□□□□ -1.03
SHANK2-204ENST00000409530 C8orf87E5RJ46 101 aa8.64□□□□□ -1.03
SHANK2-204ENST00000409530 HERC1Q15751 4861 aa8.64□□□□□ -1.03
SHANK2-204ENST00000409530 FP248Q71RG6 208 aaPredicted RBP8.62□□□□□ -1.03
SHANK2-204ENST00000409530 A0A0U1RQV1 116 aa8.61□□□□□ -1.03
SHANK2-204ENST00000409530 MRPL34Q9BQ48 92 aaKnown RBP8.61□□□□□ -1.03
SHANK2-204ENST00000409530 LPAP08519 4548 aa8.61□□□□□ -1.03
SHANK2-204ENST00000409530 SMIM26A0A096LP01 95 aa8.59□□□□□ -1.03
SHANK2-204ENST00000409530 KRTAP16-1A8MUX0 517 aa8.59□□□□□ -1.03
SHANK2-204ENST00000409530 KRTAP13-3Q3SY46 172 aa8.55□□□□□ -1.04
SHANK2-204ENST00000409530 XP32Q5T750 250 aa8.5□□□□□ -1.05
SHANK2-204ENST00000409530 Q8N9P0 234 aaPredicted RBP8.48□□□□□ -1.05
SHANK2-204ENST00000409530 TPRXLQ17RH7 258 aa8.47□□□□□ -1.05
SHANK2-204ENST00000409530 LRP2P98164 4655 aa8.46□□□□□ -1.05
SHANK2-204ENST00000409530 ZCCHC13Q8WW36 166 aaKnown RBP8.45□□□□□ -1.06
SHANK2-204ENST00000409530 Q5W150 140 aa8.44□□□□□ -1.06
SHANK2-204ENST00000409530 C20orf166-AS1Q96NR2 134 aa8.44□□□□□ -1.06
SHANK2-204ENST00000409530 H0Y9P7 68 aa8.43□□□□□ -1.06
SHANK2-204ENST00000409530 A8MUU9 505 aa8.42□□□□□ -1.06
SHANK2-204ENST00000409530 TP53AIP1Q9HCN2 124 aa8.42□□□□□ -1.06
SHANK2-204ENST00000409530 HMCN2Q8NDA2 5059 aa8.42□□□□□ -1.06
SHANK2-204ENST00000409530 TRAV22A0A0B4J277 110 aa8.42□□□□□ -1.06
SHANK2-204ENST00000409530 PMAIP1Q13794 54 aa8.42□□□□□ -1.06
SHANK2-204ENST00000409530 BRK1Q8WUW1 75 aa8.42□□□□□ -1.06
SHANK2-204ENST00000409530 Q75L30 129 aa8.39□□□□□ -1.07
SHANK2-204ENST00000409530 RPL37P61927 97 aaKnown RBP8.39□□□□□ -1.07
SHANK2-204ENST00000409530 LINC00208Q96KT6 92 aa8.38□□□□□ -1.07
SHANK2-204ENST00000409530 MP68P56378 58 aa8.37□□□□□ -1.07
SHANK2-204ENST00000409530 ATP11AUNQ6ZP68 121 aa8.36□□□□□ -1.07
SHANK2-204ENST00000409530 MPLKIPQ8TAP9 179 aa8.35□□□□□ -1.07
SHANK2-204ENST00000409530 IGKV2D-30A0A075B6S6 120 aa8.34□□□□□ -1.07
SHANK2-204ENST00000409530 IGKV2-30P06310 120 aa8.34□□□□□ -1.07
SHANK2-204ENST00000409530 C1orf64Q8NEQ6 169 aa8.34□□□□□ -1.07
SHANK2-204ENST00000409530 PCOTHQ58A44 107 aa8.33□□□□□ -1.08
SHANK2-204ENST00000409530 CYP4F30PQ9H0H9 118 aa8.33□□□□□ -1.08
SHANK2-204ENST00000409530 H3BPC8 53 aa8.28□□□□□ -1.08
SHANK2-204ENST00000409530 Q1T7F1 81 aa8.28□□□□□ -1.08
SHANK2-204ENST00000409530 SPANXA2-OT1Q8N9U9 137 aa8.24□□□□□ -1.09
SHANK2-204ENST00000409530 LOC101927531A0A1B0GV80 90 aa8.23□□□□□ -1.09
SHANK2-204ENST00000409530 C7orf65Q6ZTY9 151 aa8.21□□□□□ -1.09
SHANK2-204ENST00000409530 SPINK7P58062 85 aa8.21□□□□□ -1.1
SHANK2-204ENST00000409530 SEC61BP60468 96 aaKnown RBP8.2□□□□□ -1.1
SHANK2-204ENST00000409530 UBR4Q5T4S7 5183 aa8.17□□□□□ -1.1
SHANK2-204ENST00000409530 MUC2Q02817 5179 aa8.14□□□□□ -1.11
SHANK2-204ENST00000409530 PSPHP1O15172 72 aa8.12□□□□□ -1.11
SHANK2-204ENST00000409530 HRES1P13985 223 aa8.12□□□□□ -1.11
SHANK2-204ENST00000409530 KRTAP4-1Q9BYQ7 146 aa8.11□□□□□ -1.11
SHANK2-204ENST00000409530 MUC17Q685J3 4493 aa8.1□□□□□ -1.11
SHANK2-204ENST00000409530 RBM12B-AS1Q9P1G2 102 aa8.08□□□□□ -1.12
SHANK2-204ENST00000409530 A8MUN3 132 aa8.06□□□□□ -1.12
SHANK2-204ENST00000409530 RNF213Q63HN8 5207 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms