RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 NDUFV3P56181 108 aaKnown RBP6.9□□□□□ -1.31
CHRNA1-203ENST00000409219 Q6JHZ5 121 aa6.9□□□□□ -1.31
CHRNA1-203ENST00000409219 DSCR8Q96T75 97 aa6.9□□□□□ -1.31
CHRNA1-203ENST00000409219 FCGBPQ9Y6R7 5405 aaPredicted RBP6.9□□□□□ -1.31
CHRNA1-203ENST00000409219 A0A1B0GV72 72 aa6.88□□□□□ -1.31
CHRNA1-203ENST00000409219 Q9BRP9 147 aa6.88□□□□□ -1.31
CHRNA1-203ENST00000409219 IGLV5-48A0A075B6I7 105 aa6.87□□□□□ -1.31
CHRNA1-203ENST00000409219 ERC2-IT1O76042 136 aa6.85□□□□□ -1.31
CHRNA1-203ENST00000409219 ATP5EP2Q5VTU8 51 aa6.85□□□□□ -1.31
CHRNA1-203ENST00000409219 UBL5Q9BZL1 73 aa6.84□□□□□ -1.31
CHRNA1-203ENST00000409219 C9orf153Q5TBE3 101 aa6.82□□□□□ -1.32
CHRNA1-203ENST00000409219 ANAPC13Q9BS18 74 aa6.82□□□□□ -1.32
CHRNA1-203ENST00000409219 A0A1B0GW54 56 aa6.8□□□□□ -1.32
CHRNA1-203ENST00000409219 IGKV3D-7A0A0C4DH55 119 aa6.79□□□□□ -1.32
CHRNA1-203ENST00000409219 HIST1H4AP62805 103 aaKnown RBP6.79□□□□□ -1.32
CHRNA1-203ENST00000409219 ST20-AS1Q8NBB2 130 aa6.79□□□□□ -1.32
CHRNA1-203ENST00000409219 DEFB105AQ8NG35 78 aa6.79□□□□□ -1.32
CHRNA1-203ENST00000409219 MACF1Q9UPN3 7388 aaKnown RBP6.79□□□□□ -1.32
CHRNA1-203ENST00000409219 FAM236AA0A1B0GUQ0 79 aa6.79□□□□□ -1.32
CHRNA1-203ENST00000409219 FAM236BA0A1B0GV22 79 aa6.79□□□□□ -1.32
CHRNA1-203ENST00000409219 Q6ZVQ6 151 aa6.79□□□□□ -1.32
CHRNA1-203ENST00000409219 KRTAP19-1Q8IUB9 90 aa6.79□□□□□ -1.32
CHRNA1-203ENST00000409219 LIMD2Q9BT23 127 aa6.79□□□□□ -1.32
CHRNA1-203ENST00000409219 KRTAP9-8Q9BYQ0 159 aa6.79□□□□□ -1.32
CHRNA1-203ENST00000409219 RPL37P61927 97 aaKnown RBP6.78□□□□□ -1.32
CHRNA1-203ENST00000409219 CXCL6P80162 114 aa6.76□□□□□ -1.33
CHRNA1-203ENST00000409219 SMIM29Q86T20 159 aa6.76□□□□□ -1.33
CHRNA1-203ENST00000409219 SPRR1BP22528 89 aa6.75□□□□□ -1.33
CHRNA1-203ENST00000409219 HRCT1Q6UXD1 115 aa6.74□□□□□ -1.33
CHRNA1-203ENST00000409219 SYNE2Q8WXH0 6885 aaKnown RBP6.73□□□□□ -1.33
CHRNA1-203ENST00000409219 A0A1W2PNM2 257 aa6.73□□□□□ -1.33
CHRNA1-203ENST00000409219 ATOX1O00244 68 aa6.73□□□□□ -1.33
CHRNA1-203ENST00000409219 F8WEM9 126 aa6.72□□□□□ -1.33
CHRNA1-203ENST00000409219 A0A087WVE0 104 aa6.71□□□□□ -1.34
CHRNA1-203ENST00000409219 LCE2BO14633 110 aa6.69□□□□□ -1.34
CHRNA1-203ENST00000409219 NREPQ16612 68 aa6.69□□□□□ -1.34
CHRNA1-203ENST00000409219 CCDC179H3BU77 68 aa6.67□□□□□ -1.34
CHRNA1-203ENST00000409219 IGFL1Q6UW32 110 aa6.66□□□□□ -1.34
CHRNA1-203ENST00000409219 UQCRQO14949 82 aa6.66□□□□□ -1.34
CHRNA1-203ENST00000409219 COX7CP15954 63 aa6.66□□□□□ -1.34
CHRNA1-203ENST00000409219 SERP2Q8N6R1 65 aa6.65□□□□□ -1.35
CHRNA1-203ENST00000409219 BPY2O14599 106 aa6.64□□□□□ -1.35
CHRNA1-203ENST00000409219 C1orf195Q5TG92 126 aa6.64□□□□□ -1.35
CHRNA1-203ENST00000409219 MT2AP02795 61 aa6.63□□□□□ -1.35
CHRNA1-203ENST00000409219 IGKV4-1P06312 121 aa6.62□□□□□ -1.35
CHRNA1-203ENST00000409219 CD164Q04900 197 aa6.62□□□□□ -1.35
CHRNA1-203ENST00000409219 Q5XG85 94 aa6.61□□□□□ -1.35
CHRNA1-203ENST00000409219 SMIM20Q8N5G0 67 aa6.61□□□□□ -1.35
CHRNA1-203ENST00000409219 MT1FP04733 61 aa6.59□□□□□ -1.36
CHRNA1-203ENST00000409219 KRTAP9-3Q9BYQ3 159 aa6.59□□□□□ -1.36
CHRNA1-203ENST00000409219 A0A0G2JQZ4 141 aa6.58□□□□□ -1.36
CHRNA1-203ENST00000409219 TRAV7A0A075B6U4 112 aa6.57□□□□□ -1.36
CHRNA1-203ENST00000409219 DSCR10P59022 87 aa6.57□□□□□ -1.36
CHRNA1-203ENST00000409219 A0A087WSZ3 146 aa6.56□□□□□ -1.36
CHRNA1-203ENST00000409219 Q8N9L7 120 aa6.56□□□□□ -1.36
CHRNA1-203ENST00000409219 KRTAP6-3Q3LI67 103 aa6.53□□□□□ -1.36
CHRNA1-203ENST00000409219 KRTAP3-3Q9BYR6 98 aa6.53□□□□□ -1.36
CHRNA1-203ENST00000409219 KRTAP3-2Q9BYR7 98 aa6.53□□□□□ -1.36
CHRNA1-203ENST00000409219 KRTAP19-6Q3LI70 58 aa6.53□□□□□ -1.36
CHRNA1-203ENST00000409219 ATP11AUNQ6ZP68 121 aa6.53□□□□□ -1.36
CHRNA1-203ENST00000409219 LINC00472Q9H8W2 130 aa6.52□□□□□ -1.37
CHRNA1-203ENST00000409219 K7EQZ3 153 aa6.51□□□□□ -1.37
CHRNA1-203ENST00000409219 Q75L30 129 aa6.51□□□□□ -1.37
CHRNA1-203ENST00000409219 OCR1Q9BZK8 76 aa6.5□□□□□ -1.37
CHRNA1-203ENST00000409219 KRTAP10-10P60014 251 aa6.49□□□□□ -1.37
CHRNA1-203ENST00000409219 J3KT08 172 aa6.48□□□□□ -1.37
CHRNA1-203ENST00000409219 SS18L2Q9UHA2 77 aa6.47□□□□□ -1.37
CHRNA1-203ENST00000409219 A8MWP4 228 aa6.47□□□□□ -1.37
CHRNA1-203ENST00000409219 HCG22E2RYF7 251 aa6.47□□□□□ -1.37
CHRNA1-203ENST00000409219 KLKP1Q107X0 134 aa6.47□□□□□ -1.37
CHRNA1-203ENST00000409219 CYSTM1Q9H1C7 97 aa6.47□□□□□ -1.37
CHRNA1-203ENST00000409219 PRR15Q8IV56 129 aa6.46□□□□□ -1.38
CHRNA1-203ENST00000409219 C20orf197Q8N268 126 aa6.46□□□□□ -1.38
CHRNA1-203ENST00000409219 TMEM258P61165 79 aa6.45□□□□□ -1.38
CHRNA1-203ENST00000409219 DEFB116Q30KQ4 102 aa6.45□□□□□ -1.38
CHRNA1-203ENST00000409219 Q96NJ1 140 aa6.45□□□□□ -1.38
CHRNA1-203ENST00000409219 TMEM254Q8TBM7 123 aa6.41□□□□□ -1.38
CHRNA1-203ENST00000409219 H7BZZ5 65 aa6.4□□□□□ -1.39
CHRNA1-203ENST00000409219 NDUFC1O43677 76 aa6.4□□□□□ -1.39
CHRNA1-203ENST00000409219 NDUFB1O75438 58 aa6.4□□□□□ -1.39
CHRNA1-203ENST00000409219 C20orf166-AS1Q96NR2 134 aa6.39□□□□□ -1.39
CHRNA1-203ENST00000409219 CASC2Q6XLA1 102 aa6.38□□□□□ -1.39
CHRNA1-203ENST00000409219 SVIPQ8NHG7 77 aa6.38□□□□□ -1.39
CHRNA1-203ENST00000409219 SNURFQ9Y675 71 aa6.38□□□□□ -1.39
CHRNA1-203ENST00000409219 NEBP20929 6669 aa6.38□□□□□ -1.39
CHRNA1-203ENST00000409219 MMP24-AS1A0A0U1RRL7 71 aa6.37□□□□□ -1.39
CHRNA1-203ENST00000409219 C5orf47Q569G3 176 aa6.37□□□□□ -1.39
CHRNA1-203ENST00000409219 WFDC13Q8IUB5 93 aa6.37□□□□□ -1.39
CHRNA1-203ENST00000409219 FAM236DA0A1B0GTK5 79 aa6.36□□□□□ -1.39
CHRNA1-203ENST00000409219 FAM236CP0DP71 79 aa6.36□□□□□ -1.39
CHRNA1-203ENST00000409219 A0A1B0GVX0 72 aa6.34□□□□□ -1.39
CHRNA1-203ENST00000409219 RPS28P62857 69 aaKnown RBP6.34□□□□□ -1.39
CHRNA1-203ENST00000409219 A8MUU9 505 aa6.34□□□□□ -1.4
CHRNA1-203ENST00000409219 ZCCHC13Q8WW36 166 aaKnown RBP6.34□□□□□ -1.4
CHRNA1-203ENST00000409219 MUC12Q9UKN1 5478 aa6.33□□□□□ -1.4
CHRNA1-203ENST00000409219 C8orf17Q9NRJ1 99 aa6.33□□□□□ -1.4
CHRNA1-203ENST00000409219 hDV103S1A0JD37 113 aa6.32□□□□□ -1.4
CHRNA1-203ENST00000409219 ATP5EP56381 51 aaPredicted RBP6.31□□□□□ -1.4
CHRNA1-203ENST00000409219 KRTAP20-1Q3LI63 56 aa6.31□□□□□ -1.4
CHRNA1-203ENST00000409219 H3BPC8 53 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms