RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 NOTCH2NLQ7Z3S9 236 aa9.4□□□□□ -0.9
PDLIM2-206ENST00000409141 A0A1B0GW54 56 aa9.4□□□□□ -0.91
PDLIM2-206ENST00000409141 SPCS1Q9Y6A9 102 aa9.4□□□□□ -0.91
PDLIM2-206ENST00000409141 J3KT08 172 aa9.39□□□□□ -0.91
PDLIM2-206ENST00000409141 H3BT86 120 aa9.38□□□□□ -0.91
PDLIM2-206ENST00000409141 A0A1B0GVX0 72 aa9.37□□□□□ -0.91
PDLIM2-206ENST00000409141 KRTAP16-1A8MUX0 517 aa9.37□□□□□ -0.91
PDLIM2-206ENST00000409141 MTURNQ8N3F0 131 aa9.37□□□□□ -0.91
PDLIM2-206ENST00000409141 K7EP34 96 aa9.35□□□□□ -0.91
PDLIM2-206ENST00000409141 C8orf87E5RJ46 101 aa9.34□□□□□ -0.91
PDLIM2-206ENST00000409141 COX6B2Q6YFQ2 88 aa9.34□□□□□ -0.91
PDLIM2-206ENST00000409141 NDUFB1O75438 58 aa9.33□□□□□ -0.92
PDLIM2-206ENST00000409141 GTF2H5Q6ZYL4 71 aa9.32□□□□□ -0.92
PDLIM2-206ENST00000409141 MT1HP80294 61 aa9.31□□□□□ -0.92
PDLIM2-206ENST00000409141 NREPQ16612 68 aa9.3□□□□□ -0.92
PDLIM2-206ENST00000409141 A0A1B0GV90 55 aa9.27□□□□□ -0.93
PDLIM2-206ENST00000409141 A8MWP4 228 aa9.27□□□□□ -0.93
PDLIM2-206ENST00000409141 IGKV3D-7A0A0C4DH55 119 aa9.23□□□□□ -0.93
PDLIM2-206ENST00000409141 PRO0461Q9UI25 63 aa9.23□□□□□ -0.93
PDLIM2-206ENST00000409141 C8orf17Q9NRJ1 99 aa9.22□□□□□ -0.93
PDLIM2-206ENST00000409141 M0R2T5 61 aa9.21□□□□□ -0.93
PDLIM2-206ENST00000409141 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.93
PDLIM2-206ENST00000409141 KRTAP9-2Q9BYQ4 174 aa9.21□□□□□ -0.93
PDLIM2-206ENST00000409141 F8W1H4 67 aa9.19□□□□□ -0.94
PDLIM2-206ENST00000409141 PRR15Q8IV56 129 aa9.19□□□□□ -0.94
PDLIM2-206ENST00000409141 Q8N9P0 234 aaPredicted RBP9.16□□□□□ -0.94
PDLIM2-206ENST00000409141 ZCCHC13Q8WW36 166 aaKnown RBP9.16□□□□□ -0.94
PDLIM2-206ENST00000409141 Q6ZVQ6 151 aa9.15□□□□□ -0.95
PDLIM2-206ENST00000409141 FLGP20930 4061 aaPredicted RBP9.13□□□□□ -0.95
PDLIM2-206ENST00000409141 BPY2O14599 106 aa9.13□□□□□ -0.95
PDLIM2-206ENST00000409141 K7EQZ3 153 aa9.11□□□□□ -0.95
PDLIM2-206ENST00000409141 KRTAP10-6P60371 365 aaPredicted RBP9.11□□□□□ -0.95
PDLIM2-206ENST00000409141 MMP24-AS1A0A0U1RRL7 71 aa9.1□□□□□ -0.95
PDLIM2-206ENST00000409141 HRES1P13985 223 aa9.08□□□□□ -0.96
PDLIM2-206ENST00000409141 LORP23490 312 aaPredicted RBP9.08□□□□□ -0.96
PDLIM2-206ENST00000409141 FAM236DA0A1B0GTK5 79 aa9.08□□□□□ -0.96
PDLIM2-206ENST00000409141 FAM236CP0DP71 79 aa9.08□□□□□ -0.96
PDLIM2-206ENST00000409141 TMEM254Q8TBM7 123 aa9.08□□□□□ -0.96
PDLIM2-206ENST00000409141 MRPL34Q9BQ48 92 aaKnown RBP9.08□□□□□ -0.96
PDLIM2-206ENST00000409141 RBM12B-AS1Q9P1G2 102 aa9.08□□□□□ -0.96
PDLIM2-206ENST00000409141 hDV103S1A0JD37 113 aa9.07□□□□□ -0.96
PDLIM2-206ENST00000409141 ETDBQ3ZM63 59 aa9.07□□□□□ -0.96
PDLIM2-206ENST00000409141 SPINK7P58062 85 aa9.05□□□□□ -0.96
PDLIM2-206ENST00000409141 MPLKIPQ8TAP9 179 aa9.05□□□□□ -0.96
PDLIM2-206ENST00000409141 LCE2DQ5TA82 110 aaPredicted RBP9.04□□□□□ -0.96
PDLIM2-206ENST00000409141 LINC00846Q9NV44 126 aa9.04□□□□□ -0.96
PDLIM2-206ENST00000409141 UBL5Q9BZL1 73 aa9.03□□□□□ -0.96
PDLIM2-206ENST00000409141 NDUFS5O43920 106 aa9.02□□□□□ -0.96
PDLIM2-206ENST00000409141 Q8N9L7 120 aa9.02□□□□□ -0.96
PDLIM2-206ENST00000409141 WFDC13Q8IUB5 93 aa8.98□□□□□ -0.97
PDLIM2-206ENST00000409141 CASC2Q6XLA1 102 aa8.96□□□□□ -0.97
PDLIM2-206ENST00000409141 HCG22E2RYF7 251 aa8.89□□□□□ -0.99
PDLIM2-206ENST00000409141 Q5W150 140 aa8.88□□□□□ -0.99
PDLIM2-206ENST00000409141 FAM240AA0A1B0GVK7 77 aa8.86□□□□□ -0.99
PDLIM2-206ENST00000409141 KRTAP9-6A0A140TA67 174 aa8.85□□□□□ -0.99
PDLIM2-206ENST00000409141 IGKV2D-30A0A075B6S6 120 aa8.83□□□□□ -1
PDLIM2-206ENST00000409141 IGKV2-30P06310 120 aa8.83□□□□□ -1
PDLIM2-206ENST00000409141 ACYP1P07311 99 aa8.83□□□□□ -1
PDLIM2-206ENST00000409141 CXCL6P80162 114 aa8.83□□□□□ -1
PDLIM2-206ENST00000409141 KRTAP9-8Q9BYQ0 159 aa8.83□□□□□ -1
PDLIM2-206ENST00000409141 J3QR89 54 aa8.83□□□□□ -1
PDLIM2-206ENST00000409141 FSIP2Q5CZC0 6907 aa8.82□□□□□ -1
PDLIM2-206ENST00000409141 C7orf65Q6ZTY9 151 aa8.8□□□□□ -1
PDLIM2-206ENST00000409141 K7ERU9 68 aa8.75□□□□□ -1.01
PDLIM2-206ENST00000409141 CRCT1Q9UGL9 99 aa8.75□□□□□ -1.01
PDLIM2-206ENST00000409141 MT2AP02795 61 aa8.73□□□□□ -1.01
PDLIM2-206ENST00000409141 H1FX-AS1Q4G0G2 97 aa8.71□□□□□ -1.01
PDLIM2-206ENST00000409141 TP53AIP1Q9HCN2 124 aa8.71□□□□□ -1.01
PDLIM2-206ENST00000409141 MT1FP04733 61 aa8.66□□□□□ -1.02
PDLIM2-206ENST00000409141 KRTAP10-10P60014 251 aa8.66□□□□□ -1.02
PDLIM2-206ENST00000409141 C4orf26Q17RF5 130 aa8.66□□□□□ -1.02
PDLIM2-206ENST00000409141 ATP5EP2Q5VTU8 51 aa8.66□□□□□ -1.02
PDLIM2-206ENST00000409141 LINC00643Q86TS7 51 aa8.65□□□□□ -1.02
PDLIM2-206ENST00000409141 HIST1H4AP62805 103 aaKnown RBP8.63□□□□□ -1.03
PDLIM2-206ENST00000409141 USH2AO75445 5202 aa8.55□□□□□ -1.04
PDLIM2-206ENST00000409141 KRTAP9-3Q9BYQ3 159 aa8.55□□□□□ -1.04
PDLIM2-206ENST00000409141 C1orf64Q8NEQ6 169 aa8.53□□□□□ -1.04
PDLIM2-206ENST00000409141 TRAV22A0A0B4J277 110 aa8.52□□□□□ -1.05
PDLIM2-206ENST00000409141 KRTAP3-1Q9BYR8 98 aa8.52□□□□□ -1.05
PDLIM2-206ENST00000409141 A0A087WVE0 104 aa8.51□□□□□ -1.05
PDLIM2-206ENST00000409141 CYP4F30PQ9H0H9 118 aa8.51□□□□□ -1.05
PDLIM2-206ENST00000409141 LOC101927531A0A1B0GV80 90 aa8.48□□□□□ -1.05
PDLIM2-206ENST00000409141 LCE2BO14633 110 aa8.48□□□□□ -1.05
PDLIM2-206ENST00000409141 UQCRQO14949 82 aa8.48□□□□□ -1.05
PDLIM2-206ENST00000409141 MT-ATP8P03928 68 aa8.46□□□□□ -1.05
PDLIM2-206ENST00000409141 IMUPQ9GZP8 106 aa8.45□□□□□ -1.06
PDLIM2-206ENST00000409141 S4R3F8 94 aa8.45□□□□□ -1.06
PDLIM2-206ENST00000409141 C5orf47Q569G3 176 aa8.44□□□□□ -1.06
PDLIM2-206ENST00000409141 H0Y9P7 68 aa8.43□□□□□ -1.06
PDLIM2-206ENST00000409141 SSPOA2VEC9 5147 aa8.42□□□□□ -1.06
PDLIM2-206ENST00000409141 ATOX1O00244 68 aa8.42□□□□□ -1.06
PDLIM2-206ENST00000409141 CSAG1Q6PB30 78 aa8.38□□□□□ -1.07
PDLIM2-206ENST00000409141 LCA10Q71F78 164 aa8.38□□□□□ -1.07
PDLIM2-206ENST00000409141 LINC00208Q96KT6 92 aa8.32□□□□□ -1.08
PDLIM2-206ENST00000409141 OCR1Q9BZK8 76 aa8.32□□□□□ -1.08
PDLIM2-206ENST00000409141 MP68P56378 58 aa8.3□□□□□ -1.08
PDLIM2-206ENST00000409141 FAM236AA0A1B0GUQ0 79 aa8.29□□□□□ -1.08
PDLIM2-206ENST00000409141 FAM236BA0A1B0GV22 79 aa8.29□□□□□ -1.08
PDLIM2-206ENST00000409141 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.09
PDLIM2-206ENST00000409141 KRTAP3-3Q9BYR6 98 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms