RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 WDFY3Q8IZQ1 3526 aa7.88□□□□□ -1.15
SNED1-205ENST00000405547 HRNRQ86YZ3 2850 aaPredicted RBP7.88□□□□□ -1.15
SNED1-205ENST00000405547 ROMO1P60602 79 aa7.88□□□□□ -1.15
SNED1-205ENST00000405547 MYO15AQ9UKN7 3530 aa7.87□□□□□ -1.15
SNED1-205ENST00000405547 H1FX-AS1Q4G0G2 97 aa7.86□□□□□ -1.15
SNED1-205ENST00000405547 A0A0A0MQY5 61 aa7.83□□□□□ -1.16
SNED1-205ENST00000405547 SPATA8Q6RVD6 105 aa7.83□□□□□ -1.16
SNED1-205ENST00000405547 R4GN34 69 aa7.83□□□□□ -1.16
SNED1-205ENST00000405547 PANO1I0J062 215 aa7.78□□□□□ -1.16
SNED1-205ENST00000405547 KRTAP10-1P60331 282 aa7.76□□□□□ -1.17
SNED1-205ENST00000405547 A6NN06 94 aa7.75□□□□□ -1.17
SNED1-205ENST00000405547 KRTAP10-2P60368 255 aa7.74□□□□□ -1.17
SNED1-205ENST00000405547 A0A087X002 238 aa7.74□□□□□ -1.17
SNED1-205ENST00000405547 CELSR1Q9NYQ6 3014 aa7.74□□□□□ -1.17
SNED1-205ENST00000405547 NOTCH2NLQ7Z3S9 236 aa7.73□□□□□ -1.17
SNED1-205ENST00000405547 SEC61BP60468 96 aaKnown RBP7.72□□□□□ -1.17
SNED1-205ENST00000405547 MXRA5Q9NR99 2828 aa7.71□□□□□ -1.18
SNED1-205ENST00000405547 TENM1Q9UKZ4 2725 aa7.71□□□□□ -1.18
SNED1-205ENST00000405547 KRTAP11-1Q8IUC1 163 aa7.68□□□□□ -1.18
SNED1-205ENST00000405547 KRTAP7-1Q8IUC3 87 aa7.68□□□□□ -1.18
SNED1-205ENST00000405547 M0R2T5 61 aa7.68□□□□□ -1.18
SNED1-205ENST00000405547 RPS29P62273 56 aaKnown RBP7.67□□□□□ -1.18
SNED1-205ENST00000405547 M0QZ58 72 aa7.65□□□□□ -1.19
SNED1-205ENST00000405547 Q5VSD8 79 aa7.63□□□□□ -1.19
SNED1-205ENST00000405547 KRTAP13-1Q8IUC0 172 aa7.63□□□□□ -1.19
SNED1-205ENST00000405547 Q6ZRN7 208 aaPredicted RBP7.62□□□□□ -1.19
SNED1-205ENST00000405547 ADM2Q7Z4H4 148 aa7.62□□□□□ -1.19
SNED1-205ENST00000405547 KRTAP25-1Q3LHN0 102 aa7.61□□□□□ -1.19
SNED1-205ENST00000405547 DCHS1Q96JQ0 3298 aa7.6□□□□□ -1.19
SNED1-205ENST00000405547 TENM4Q6N022 2769 aa7.59□□□□□ -1.19
SNED1-205ENST00000405547 PDZD2O15018 2839 aa7.59□□□□□ -1.19
SNED1-205ENST00000405547 TENM3Q9P273 2699 aa7.57□□□□□ -1.2
SNED1-205ENST00000405547 ASPMQ8IZT6 3477 aa7.55□□□□□ -1.2
SNED1-205ENST00000405547 A8MU10 97 aa7.52□□□□□ -1.21
SNED1-205ENST00000405547 TGP01266 2768 aa7.52□□□□□ -1.21
SNED1-205ENST00000405547 KRTAP16-1A8MUX0 517 aa7.49□□□□□ -1.21
SNED1-205ENST00000405547 KRTAP13-2Q52LG2 175 aa7.49□□□□□ -1.21
SNED1-205ENST00000405547 LAMA5O15230 3695 aa7.47□□□□□ -1.21
SNED1-205ENST00000405547 RELNP78509 3460 aa7.45□□□□□ -1.22
SNED1-205ENST00000405547 CSMD1Q96PZ7 3565 aa7.43□□□□□ -1.22
SNED1-205ENST00000405547 A8MUU9 505 aa7.42□□□□□ -1.22
SNED1-205ENST00000405547 PLAC4Q8WY50 150 aa7.41□□□□□ -1.22
SNED1-205ENST00000405547 ZFHX4Q86UP3 3567 aa7.39□□□□□ -1.23
SNED1-205ENST00000405547 PKD1L1Q8TDX9 2849 aa7.35□□□□□ -1.23
SNED1-205ENST00000405547 C20orf166-AS1Q96NR2 134 aa7.34□□□□□ -1.23
SNED1-205ENST00000405547 NDUFAF8A1L188 74 aa7.32□□□□□ -1.24
SNED1-205ENST00000405547 NBPF19A0A087WUL8 3843 aa7.3□□□□□ -1.24
SNED1-205ENST00000405547 VWFP04275 2813 aa7.29□□□□□ -1.24
SNED1-205ENST00000405547 SMG1Q96Q15 3661 aaKnown RBP7.27□□□□□ -1.25
SNED1-205ENST00000405547 DMDP11532 3685 aa7.24□□□□□ -1.25
SNED1-205ENST00000405547 H0YAA0 97 aa7.18□□□□□ -1.26
SNED1-205ENST00000405547 TNP1P09430 55 aa7.17□□□□□ -1.26
SNED1-205ENST00000405547 SPENQ96T58 3664 aaKnown RBP7.15□□□□□ -1.27
SNED1-205ENST00000405547 KRTAP1-4P0C5Y4 121 aa7.14□□□□□ -1.27
SNED1-205ENST00000405547 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
SNED1-205ENST00000405547 FBN1P35555 2871 aaKnown RBP7.14□□□□□ -1.27
SNED1-205ENST00000405547 SVEP1Q4LDE5 3571 aa7.12□□□□□ -1.27
SNED1-205ENST00000405547 CUBNO60494 3623 aa7.11□□□□□ -1.27
SNED1-205ENST00000405547 ZFHX3Q15911 3703 aa7.09□□□□□ -1.27
SNED1-205ENST00000405547 MUC3AQ02505 3323 aa7.09□□□□□ -1.28
SNED1-205ENST00000405547 TENM2Q9NT68 2774 aa7.05□□□□□ -1.28
SNED1-205ENST00000405547 COL7A1Q02388 2944 aa7.03□□□□□ -1.28
SNED1-205ENST00000405547 XP32Q5T750 250 aa7.03□□□□□ -1.28
SNED1-205ENST00000405547 C10orf95Q9H7T3 257 aa7.03□□□□□ -1.28
SNED1-205ENST00000405547 KRTAP21-3Q3LHN1 58 aa7□□□□□ -1.29
SNED1-205ENST00000405547 SRRM2Q9UQ35 2752 aaKnown RBP6.99□□□□□ -1.29
SNED1-205ENST00000405547 P0C880 135 aa6.99□□□□□ -1.29
SNED1-205ENST00000405547 FBN3Q75N90 2809 aa6.98□□□□□ -1.29
SNED1-205ENST00000405547 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
SNED1-205ENST00000405547 MEGF8Q7Z7M0 2845 aa6.97□□□□□ -1.29
SNED1-205ENST00000405547 TPRXLQ17RH7 258 aa6.91□□□□□ -1.3
SNED1-205ENST00000405547 TRRAPQ9Y4A5 3859 aa6.87□□□□□ -1.31
SNED1-205ENST00000405547 OTOGQ6ZRI0 2925 aa6.86□□□□□ -1.31
SNED1-205ENST00000405547 BSNQ9UPA5 3926 aa6.83□□□□□ -1.32
SNED1-205ENST00000405547 KRTAP10-8P60410 259 aa6.82□□□□□ -1.32
SNED1-205ENST00000405547 VPS13CQ709C8 3753 aa6.8□□□□□ -1.32
SNED1-205ENST00000405547 CSMD2Q7Z408 3487 aa6.71□□□□□ -1.34
SNED1-205ENST00000405547 A0A1B0GVY2 172 aa6.67□□□□□ -1.34
SNED1-205ENST00000405547 KRTAP12-2P59991 146 aa6.66□□□□□ -1.34
SNED1-205ENST00000405547 PRO2289Q9P1D8 64 aa6.63□□□□□ -1.35
SNED1-205ENST00000405547 KRTAP10-10P60014 251 aa6.59□□□□□ -1.35
SNED1-205ENST00000405547 KRTAP12-1P59990 96 aa6.58□□□□□ -1.36
SNED1-205ENST00000405547 KRTAP13-4Q3LI77 160 aa6.56□□□□□ -1.36
SNED1-205ENST00000405547 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
SNED1-205ENST00000405547 AKAP9Q99996 3911 aa6.47□□□□□ -1.37
SNED1-205ENST00000405547 CSMD3Q7Z407 3707 aa6.46□□□□□ -1.38
SNED1-205ENST00000405547 KRTAP10-6P60371 365 aaPredicted RBP6.41□□□□□ -1.38
SNED1-205ENST00000405547 ANK3Q12955 4377 aaKnown RBP6.4□□□□□ -1.38
SNED1-205ENST00000405547 ZNF469Q96JG9 3925 aaPredicted RBP6.37□□□□□ -1.39
SNED1-205ENST00000405547 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
SNED1-205ENST00000405547 KRTAP3-2Q9BYR7 98 aa6.16□□□□□ -1.42
SNED1-205ENST00000405547 KRTAP3-3Q9BYR6 98 aa6.16□□□□□ -1.42
SNED1-205ENST00000405547 HUWE1Q7Z6Z7 4374 aaKnown RBP6.11□□□□□ -1.43
SNED1-205ENST00000405547 INE1O15225 51 aa6.07□□□□□ -1.44
SNED1-205ENST00000405547 MT1HL1P0DM35 61 aa6.01□□□□□ -1.45
SNED1-205ENST00000405547 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
SNED1-205ENST00000405547 KRTAP10-4P60372 401 aaPredicted RBP5.93□□□□□ -1.46
SNED1-205ENST00000405547 ALMS1Q8TCU4 4167 aa5.92□□□□□ -1.46
SNED1-205ENST00000405547 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
SNED1-205ENST00000405547 DNAH2Q9P225 4427 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms