RNA–Protein interactions for RNA: ENST00000405097.5

RDX-202, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-202ENST00000405097 TP53AIP1Q9HCN2 124 aa12□□□□□ -0.49
RDX-202ENST00000405097 BRK1Q8WUW1 75 aa11.99□□□□□ -0.49
RDX-202ENST00000405097 PRO0628Q9UI54 55 aa11.99□□□□□ -0.49
RDX-202ENST00000405097 PCOTHQ58A44 107 aa11.98□□□□□ -0.49
RDX-202ENST00000405097 Q1T7F1 81 aa11.97□□□□□ -0.49
RDX-202ENST00000405097 MRPL34Q9BQ48 92 aaKnown RBP11.96□□□□□ -0.49
RDX-202ENST00000405097 PSPHP1O15172 72 aa11.92□□□□□ -0.5
RDX-202ENST00000405097 CD164Q04900 197 aa11.91□□□□□ -0.5
RDX-202ENST00000405097 IGLV7-46A0A075B6I9 117 aa11.89□□□□□ -0.51
RDX-202ENST00000405097 LRP1BQ9NZR2 4599 aa11.88□□□□□ -0.51
RDX-202ENST00000405097 HYDINQ4G0P3 5121 aa11.87□□□□□ -0.51
RDX-202ENST00000405097 KRTAP10-1P60331 282 aa11.86□□□□□ -0.51
RDX-202ENST00000405097 SSBP3-AS1Q7Z2R9 100 aa11.86□□□□□ -0.51
RDX-202ENST00000405097 COA5Q86WW8 74 aa11.84□□□□□ -0.51
RDX-202ENST00000405097 PKD1P98161 4303 aa11.83□□□□□ -0.52
RDX-202ENST00000405097 A8MUN3 132 aa11.82□□□□□ -0.52
RDX-202ENST00000405097 FAT2Q9NYQ8 4349 aa11.81□□□□□ -0.52
RDX-202ENST00000405097 Q5W150 140 aa11.81□□□□□ -0.52
RDX-202ENST00000405097 KRTAP13-2Q52LG2 175 aa11.8□□□□□ -0.52
RDX-202ENST00000405097 Q6ZSA8 131 aa11.8□□□□□ -0.52
RDX-202ENST00000405097 Q8N9P0 234 aaPredicted RBP11.79□□□□□ -0.52
RDX-202ENST00000405097 V9GYY9 64 aa11.78□□□□□ -0.52
RDX-202ENST00000405097 KRTAP13-3Q3SY46 172 aa11.73□□□□□ -0.53
RDX-202ENST00000405097 Q5VV11 94 aa11.72□□□□□ -0.53
RDX-202ENST00000405097 C8orf87E5RJ46 101 aa11.71□□□□□ -0.54
RDX-202ENST00000405097 LOC101927531A0A1B0GV80 90 aa11.7□□□□□ -0.54
RDX-202ENST00000405097 C1orf195Q5TG92 126 aa11.7□□□□□ -0.54
RDX-202ENST00000405097 LIMD2Q9BT23 127 aa11.69□□□□□ -0.54
RDX-202ENST00000405097 PRR15LQ9BU68 103 aa11.69□□□□□ -0.54
RDX-202ENST00000405097 VPS13BQ7Z7G8 4022 aa11.69□□□□□ -0.54
RDX-202ENST00000405097 LINC00313P59037 77 aa11.68□□□□□ -0.54
RDX-202ENST00000405097 KRTAP1-4P0C5Y4 121 aa11.67□□□□□ -0.54
RDX-202ENST00000405097 HRES1P13985 223 aa11.67□□□□□ -0.54
RDX-202ENST00000405097 RETNLBQ9BQ08 111 aa11.66□□□□□ -0.54
RDX-202ENST00000405097 CHKB-CPT1BH3BT56 60 aa11.62□□□□□ -0.55
RDX-202ENST00000405097 SPAG11AQ6PDA7 123 aa11.62□□□□□ -0.55
RDX-202ENST00000405097 A8MU10 97 aa11.61□□□□□ -0.55
RDX-202ENST00000405097 PLA2G1BP04054 148 aaKnown RBP11.57□□□□□ -0.56
RDX-202ENST00000405097 FAM229AH3BQW9 127 aa11.56□□□□□ -0.56
RDX-202ENST00000405097 KRTAP16-1A8MUX0 517 aa11.54□□□□□ -0.56
RDX-202ENST00000405097 PKHD1P08F94 4074 aa11.54□□□□□ -0.56
RDX-202ENST00000405097 TYMSOSQ8TAI1 123 aa11.52□□□□□ -0.56
RDX-202ENST00000405097 PRR26Q8N8Z3 221 aa11.52□□□□□ -0.57
RDX-202ENST00000405097 Q75L30 129 aa11.51□□□□□ -0.57
RDX-202ENST00000405097 C4orf48Q5BLP8 95 aa11.51□□□□□ -0.57
RDX-202ENST00000405097 LINC01558Q9Y6Z2 57 aa11.51□□□□□ -0.57
RDX-202ENST00000405097 SACSQ9NZJ4 4579 aa11.5□□□□□ -0.57
RDX-202ENST00000405097 IGKV2-30P06310 120 aa11.47□□□□□ -0.57
RDX-202ENST00000405097 A6NED7 52 aa11.47□□□□□ -0.57
RDX-202ENST00000405097 ACYP2P14621 99 aa11.45□□□□□ -0.58
RDX-202ENST00000405097 DMAC1Q96GE9 116 aa11.43□□□□□ -0.58
RDX-202ENST00000405097 SPINK1P00995 79 aa11.42□□□□□ -0.58
RDX-202ENST00000405097 LCA10Q71F78 164 aa11.42□□□□□ -0.58
RDX-202ENST00000405097 SMR3BP02814 79 aaPredicted RBP11.4□□□□□ -0.58
RDX-202ENST00000405097 IGKV2D-30A0A075B6S6 120 aa11.4□□□□□ -0.58
RDX-202ENST00000405097 DYNC1H1Q14204 4646 aaKnown RBP11.39□□□□□ -0.59
RDX-202ENST00000405097 LINC00304Q8N9R0 145 aa11.35□□□□□ -0.59
RDX-202ENST00000405097 SPINK7P58062 85 aa11.34□□□□□ -0.59
RDX-202ENST00000405097 KRTAP21-3Q3LHN1 58 aa11.33□□□□□ -0.59
RDX-202ENST00000405097 SPTSSBQ8NFR3 76 aa11.33□□□□□ -0.59
RDX-202ENST00000405097 FAT1Q14517 4588 aa11.32□□□□□ -0.6
RDX-202ENST00000405097 PMAIP1Q13794 54 aa11.31□□□□□ -0.6
RDX-202ENST00000405097 CDC42SE1Q9NRR8 79 aa11.29□□□□□ -0.6
RDX-202ENST00000405097 APOBP04114 4563 aaKnown RBP11.24□□□□□ -0.61
RDX-202ENST00000405097 ATP11AUNQ6ZP68 121 aa11.23□□□□□ -0.61
RDX-202ENST00000405097 C7orf65Q6ZTY9 151 aa11.22□□□□□ -0.61
RDX-202ENST00000405097 RPS29P62273 56 aaKnown RBP11.22□□□□□ -0.61
RDX-202ENST00000405097 A0A1B0GVY2 172 aa11.21□□□□□ -0.61
RDX-202ENST00000405097 C9orf92A6NGG3 77 aa11.17□□□□□ -0.62
RDX-202ENST00000405097 KRTAP10-4P60372 401 aaPredicted RBP11.17□□□□□ -0.62
RDX-202ENST00000405097 PKHD1L1Q86WI1 4243 aa11.15□□□□□ -0.62
RDX-202ENST00000405097 A0A1B0GU69 56 aa11.15□□□□□ -0.63
RDX-202ENST00000405097 Q8N1X5 172 aa11.13□□□□□ -0.63
RDX-202ENST00000405097 A6NN06 94 aa11.09□□□□□ -0.63
RDX-202ENST00000405097 RYR2Q92736 4967 aa11.08□□□□□ -0.64
RDX-202ENST00000405097 A8MUU9 505 aa11.03□□□□□ -0.64
RDX-202ENST00000405097 C20orf166-AS1Q96NR2 134 aa11.03□□□□□ -0.64
RDX-202ENST00000405097 KMT2CQ8NEZ4 4911 aaKnown RBP11.02□□□□□ -0.65
RDX-202ENST00000405097 KTN1-AS1Q86SY8 53 aa11□□□□□ -0.65
RDX-202ENST00000405097 UQCR11O14957 56 aa10.91□□□□□ -0.66
RDX-202ENST00000405097 SPATA8Q6RVD6 105 aa10.91□□□□□ -0.66
RDX-202ENST00000405097 FLG2Q5D862 2391 aaPredicted RBP10.91□□□□□ -0.66
RDX-202ENST00000405097 MIR22HGQ0VDD5 57 aa10.89□□□□□ -0.67
RDX-202ENST00000405097 LRP1Q07954 4544 aaKnown RBP10.88□□□□□ -0.67
RDX-202ENST00000405097 KRTAP3-1Q9BYR8 98 aa10.88□□□□□ -0.67
RDX-202ENST00000405097 SEC61GP60059 68 aa10.84□□□□□ -0.67
RDX-202ENST00000405097 FAT3Q8TDW7 4589 aa10.83□□□□□ -0.68
RDX-202ENST00000405097 TNXBP22105 4242 aa10.81□□□□□ -0.68
RDX-202ENST00000405097 HSPG2P98160 4391 aa10.77□□□□□ -0.69
RDX-202ENST00000405097 Q5VSD8 79 aa10.74□□□□□ -0.69
RDX-202ENST00000405097 KRTAP10-8P60410 259 aa10.73□□□□□ -0.69
RDX-202ENST00000405097 RBM12B-AS1Q9P1G2 102 aa10.72□□□□□ -0.69
RDX-202ENST00000405097 COX6B2Q6YFQ2 88 aa10.68□□□□□ -0.7
RDX-202ENST00000405097 DMBT1Q9UGM3 2413 aaPredicted RBP10.67□□□□□ -0.7
RDX-202ENST00000405097 RYR3Q15413 4870 aa10.66□□□□□ -0.7
RDX-202ENST00000405097 ADM2Q7Z4H4 148 aa10.65□□□□□ -0.7
RDX-202ENST00000405097 PRAC1Q96KF2 57 aa10.65□□□□□ -0.71
RDX-202ENST00000405097 MYCBP2O75592 4640 aa10.64□□□□□ -0.71
RDX-202ENST00000405097 KRTAP17-1Q9BYP8 105 aa10.62□□□□□ -0.71
RDX-202ENST00000405097 RYR1P21817 5038 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms