RNA–Protein interactions for RNA: ENST00000402394.5

CGREF1-203, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CGREF1, Length 1,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-203ENST00000402394 SPINK6Q6UWN8 80 aa15.37■□□□□ 0.05
CGREF1-203ENST00000402394 Q5XG85 94 aa15.35■□□□□ 0.05
CGREF1-203ENST00000402394 KMT2CQ8NEZ4 4911 aaKnown RBP15.34■□□□□ 0.05
CGREF1-203ENST00000402394 NOTCH2NLQ7Z3S9 236 aa15.34■□□□□ 0.05
CGREF1-203ENST00000402394 MRPL34Q9BQ48 92 aaKnown RBP15.33■□□□□ 0.05
CGREF1-203ENST00000402394 SMIM26A0A096LP01 95 aa15.33■□□□□ 0.04
CGREF1-203ENST00000402394 RYR2Q92736 4967 aa15.31■□□□□ 0.04
CGREF1-203ENST00000402394 VPS13BQ7Z7G8 4022 aa15.31■□□□□ 0.04
CGREF1-203ENST00000402394 C1orf64Q8NEQ6 169 aa15.3■□□□□ 0.04
CGREF1-203ENST00000402394 A0A1B0GVY2 172 aa15.26■□□□□ 0.03
CGREF1-203ENST00000402394 CYP4F30PQ9H0H9 118 aa15.25■□□□□ 0.03
CGREF1-203ENST00000402394 PKHD1P08F94 4074 aa15.25■□□□□ 0.03
CGREF1-203ENST00000402394 NDUFS5O43920 106 aa15.24■□□□□ 0.03
CGREF1-203ENST00000402394 PLA2G1BP04054 148 aaKnown RBP15.22■□□□□ 0.03
CGREF1-203ENST00000402394 C8orf87E5RJ46 101 aa15.21■□□□□ 0.03
CGREF1-203ENST00000402394 C4orf26Q17RF5 130 aa15.21■□□□□ 0.02
CGREF1-203ENST00000402394 C1orf195Q5TG92 126 aa15.21■□□□□ 0.02
CGREF1-203ENST00000402394 FP248Q71RG6 208 aaPredicted RBP15.21■□□□□ 0.02
CGREF1-203ENST00000402394 SPANXA2-OT1Q8N9U9 137 aa15.19■□□□□ 0.02
CGREF1-203ENST00000402394 LIMD2Q9BT23 127 aa15.17■□□□□ 0.02
CGREF1-203ENST00000402394 SVIPQ8NHG7 77 aa15.16■□□□□ 0.02
CGREF1-203ENST00000402394 PRR4Q16378 134 aa15.15■□□□□ 0.02
CGREF1-203ENST00000402394 TYMSOSQ8TAI1 123 aa15.14■□□□□ 0.01
CGREF1-203ENST00000402394 DYNC1H1Q14204 4646 aaKnown RBP15.11■□□□□ 0.01
CGREF1-203ENST00000402394 LINC00313P59037 77 aa15.09■□□□□ 0.01
CGREF1-203ENST00000402394 C4orf48Q5BLP8 95 aa15.09■□□□□ 0.01
CGREF1-203ENST00000402394 SMR3BP02814 79 aaPredicted RBP15.07■□□□□ 0
CGREF1-203ENST00000402394 SPINK1P00995 79 aa15.07■□□□□ 0
CGREF1-203ENST00000402394 KRTAP13-3Q3SY46 172 aa15.05■□□□□ -0
CGREF1-203ENST00000402394 Q5W150 140 aa15.02■□□□□ -0
CGREF1-203ENST00000402394 PRR26Q8N8Z3 221 aa15.02□□□□□ -0.01
CGREF1-203ENST00000402394 IGLV7-46A0A075B6I9 117 aa15.01□□□□□ -0.01
CGREF1-203ENST00000402394 PCOTHQ58A44 107 aa15.01□□□□□ -0.01
CGREF1-203ENST00000402394 KRTAP10-4P60372 401 aaPredicted RBP15□□□□□ -0.01
CGREF1-203ENST00000402394 RYR3Q15413 4870 aa15□□□□□ -0.01
CGREF1-203ENST00000402394 Q8N9P0 234 aaPredicted RBP15□□□□□ -0.01
CGREF1-203ENST00000402394 LOC101927531A0A1B0GV80 90 aa14.97□□□□□ -0.01
CGREF1-203ENST00000402394 KRTAP16-1A8MUX0 517 aa14.96□□□□□ -0.02
CGREF1-203ENST00000402394 RPS29P62273 56 aaKnown RBP14.96□□□□□ -0.02
CGREF1-203ENST00000402394 LINC00304Q8N9R0 145 aa14.96□□□□□ -0.02
CGREF1-203ENST00000402394 APOBP04114 4563 aaKnown RBP14.94□□□□□ -0.02
CGREF1-203ENST00000402394 MPLKIPQ8TAP9 179 aa14.93□□□□□ -0.02
CGREF1-203ENST00000402394 SPAG11AQ6PDA7 123 aa14.92□□□□□ -0.02
CGREF1-203ENST00000402394 FAM229AH3BQW9 127 aa14.89□□□□□ -0.03
CGREF1-203ENST00000402394 Q1T7F1 81 aa14.86□□□□□ -0.03
CGREF1-203ENST00000402394 FAT1Q14517 4588 aa14.79□□□□□ -0.04
CGREF1-203ENST00000402394 COA5Q86WW8 74 aa14.78□□□□□ -0.04
CGREF1-203ENST00000402394 RETNLBQ9BQ08 111 aa14.74□□□□□ -0.05
CGREF1-203ENST00000402394 PKHD1L1Q86WI1 4243 aa14.72□□□□□ -0.05
CGREF1-203ENST00000402394 IGKV2-30P06310 120 aa14.72□□□□□ -0.05
CGREF1-203ENST00000402394 V9GYY9 64 aa14.72□□□□□ -0.05
CGREF1-203ENST00000402394 HRES1P13985 223 aa14.65□□□□□ -0.06
CGREF1-203ENST00000402394 PRO0628Q9UI54 55 aa14.58□□□□□ -0.08
CGREF1-203ENST00000402394 PSPHP1O15172 72 aa14.54□□□□□ -0.08
CGREF1-203ENST00000402394 DMAC1Q96GE9 116 aa14.54□□□□□ -0.08
CGREF1-203ENST00000402394 IGKV2D-30A0A075B6S6 120 aa14.51□□□□□ -0.09
CGREF1-203ENST00000402394 ACYP2P14621 99 aa14.51□□□□□ -0.09
CGREF1-203ENST00000402394 BRK1Q8WUW1 75 aa14.5□□□□□ -0.09
CGREF1-203ENST00000402394 HSPG2P98160 4391 aa14.5□□□□□ -0.09
CGREF1-203ENST00000402394 A8MUN3 132 aa14.49□□□□□ -0.09
CGREF1-203ENST00000402394 Q5VSD8 79 aa14.49□□□□□ -0.09
CGREF1-203ENST00000402394 EPPK1P58107 5090 aaKnown RBP14.46□□□□□ -0.09
CGREF1-203ENST00000402394 C9orf92A6NGG3 77 aa14.45□□□□□ -0.1
CGREF1-203ENST00000402394 C20orf166-AS1Q96NR2 134 aa14.45□□□□□ -0.1
CGREF1-203ENST00000402394 A8MUU9 505 aa14.44□□□□□ -0.1
CGREF1-203ENST00000402394 Q5VV11 94 aa14.43□□□□□ -0.1
CGREF1-203ENST00000402394 RYR1P21817 5038 aa14.42□□□□□ -0.1
CGREF1-203ENST00000402394 KRTAP10-8P60410 259 aa14.41□□□□□ -0.1
CGREF1-203ENST00000402394 Q8N1X5 172 aa14.41□□□□□ -0.1
CGREF1-203ENST00000402394 FLG2Q5D862 2391 aaPredicted RBP14.4□□□□□ -0.1
CGREF1-203ENST00000402394 PRR15LQ9BU68 103 aa14.39□□□□□ -0.11
CGREF1-203ENST00000402394 C7orf65Q6ZTY9 151 aa14.39□□□□□ -0.11
CGREF1-203ENST00000402394 LINC01558Q9Y6Z2 57 aa14.38□□□□□ -0.11
CGREF1-203ENST00000402394 KIAA1109Q2LD37 5005 aa14.34□□□□□ -0.11
CGREF1-203ENST00000402394 KRTAP17-1Q9BYP8 105 aa14.33□□□□□ -0.11
CGREF1-203ENST00000402394 CHKB-CPT1BH3BT56 60 aa14.3□□□□□ -0.12
CGREF1-203ENST00000402394 TNXBP22105 4242 aa14.3□□□□□ -0.12
CGREF1-203ENST00000402394 Q75L30 129 aa14.29□□□□□ -0.12
CGREF1-203ENST00000402394 LRP1Q07954 4544 aaKnown RBP14.24□□□□□ -0.13
CGREF1-203ENST00000402394 FAT3Q8TDW7 4589 aa14.16□□□□□ -0.14
CGREF1-203ENST00000402394 SPINK7P58062 85 aa14.08□□□□□ -0.16
CGREF1-203ENST00000402394 A6NED7 52 aa14.07□□□□□ -0.16
CGREF1-203ENST00000402394 MT1HL1P0DM35 61 aa14.05□□□□□ -0.16
CGREF1-203ENST00000402394 A8MU10 97 aa14□□□□□ -0.17
CGREF1-203ENST00000402394 DMBT1Q9UGM3 2413 aaPredicted RBP14□□□□□ -0.17
CGREF1-203ENST00000402394 LCA10Q71F78 164 aa14□□□□□ -0.17
CGREF1-203ENST00000402394 KRTAP4-5Q9BYR2 181 aa13.96□□□□□ -0.17
CGREF1-203ENST00000402394 CDC42SE1Q9NRR8 79 aa13.96□□□□□ -0.17
CGREF1-203ENST00000402394 KRTAP3-1Q9BYR8 98 aa13.95□□□□□ -0.18
CGREF1-203ENST00000402394 ATP11AUNQ6ZP68 121 aa13.94□□□□□ -0.18
CGREF1-203ENST00000402394 A0A1B0GU69 56 aa13.94□□□□□ -0.18
CGREF1-203ENST00000402394 RPL37P61927 97 aaKnown RBP13.94□□□□□ -0.18
CGREF1-203ENST00000402394 XP32Q5T750 250 aa13.92□□□□□ -0.18
CGREF1-203ENST00000402394 MYCBP2O75592 4640 aa13.9□□□□□ -0.18
CGREF1-203ENST00000402394 BIRC6Q9NR09 4857 aa13.87□□□□□ -0.19
CGREF1-203ENST00000402394 COX6B2Q6YFQ2 88 aa13.82□□□□□ -0.2
CGREF1-203ENST00000402394 SPTSSBQ8NFR3 76 aa13.82□□□□□ -0.2
CGREF1-203ENST00000402394 PMAIP1Q13794 54 aa13.72□□□□□ -0.21
CGREF1-203ENST00000402394 HERC2O95714 4834 aa13.71□□□□□ -0.22
CGREF1-203ENST00000402394 ABCA13Q86UQ4 5058 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms