RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

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Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 SPANXA2-OT1Q8N9U9 137 aa9.54□□□□□ -0.88
CHRFAM7A-203ENST00000401522 Q96NJ1 140 aa9.54□□□□□ -0.88
CHRFAM7A-203ENST00000401522 PRR4Q16378 134 aa9.52□□□□□ -0.89
CHRFAM7A-203ENST00000401522 Q1T7F1 81 aa9.52□□□□□ -0.89
CHRFAM7A-203ENST00000401522 SMR3BP02814 79 aaPredicted RBP9.51□□□□□ -0.89
CHRFAM7A-203ENST00000401522 MOBPQ13875 183 aa9.51□□□□□ -0.89
CHRFAM7A-203ENST00000401522 PSORS1C2Q9UIG4 136 aa9.51□□□□□ -0.89
CHRFAM7A-203ENST00000401522 SRRM2Q9UQ35 2752 aaKnown RBP9.51□□□□□ -0.89
CHRFAM7A-203ENST00000401522 ASB16-AS1Q495Z4 193 aa9.5□□□□□ -0.89
CHRFAM7A-203ENST00000401522 ZNF861PO60384 105 aa9.48□□□□□ -0.89
CHRFAM7A-203ENST00000401522 TP53AIP1Q9HCN2 124 aa9.48□□□□□ -0.89
CHRFAM7A-203ENST00000401522 KIAA1109Q2LD37 5005 aa9.47□□□□□ -0.89
CHRFAM7A-203ENST00000401522 C8orf17Q9NRJ1 99 aa9.46□□□□□ -0.89
CHRFAM7A-203ENST00000401522 RYR1P21817 5038 aa9.46□□□□□ -0.9
CHRFAM7A-203ENST00000401522 BRK1Q8WUW1 75 aa9.44□□□□□ -0.9
CHRFAM7A-203ENST00000401522 HSPG2P98160 4391 aa9.44□□□□□ -0.9
CHRFAM7A-203ENST00000401522 A0A1B0GVX0 72 aa9.44□□□□□ -0.9
CHRFAM7A-203ENST00000401522 BIRC6Q9NR09 4857 aa9.44□□□□□ -0.9
CHRFAM7A-203ENST00000401522 FAM229AH3BQW9 127 aa9.43□□□□□ -0.9
CHRFAM7A-203ENST00000401522 V9GYY9 64 aa9.42□□□□□ -0.9
CHRFAM7A-203ENST00000401522 KRTAP10-4P60372 401 aaPredicted RBP9.41□□□□□ -0.9
CHRFAM7A-203ENST00000401522 Q8N1X5 172 aa9.41□□□□□ -0.9
CHRFAM7A-203ENST00000401522 VPS13BQ7Z7G8 4022 aa9.41□□□□□ -0.9
CHRFAM7A-203ENST00000401522 IGLV7-43P04211 117 aa9.41□□□□□ -0.9
CHRFAM7A-203ENST00000401522 KRTAP17-1Q9BYP8 105 aa9.41□□□□□ -0.9
CHRFAM7A-203ENST00000401522 IGHV6-1A0A0B4J1U7 121 aa9.4□□□□□ -0.9
CHRFAM7A-203ENST00000401522 PLA2G1BP04054 148 aaKnown RBP9.4□□□□□ -0.9
CHRFAM7A-203ENST00000401522 Q5VSD8 79 aa9.39□□□□□ -0.91
CHRFAM7A-203ENST00000401522 ANAPC11Q9NYG5 84 aa9.39□□□□□ -0.91
CHRFAM7A-203ENST00000401522 IGLV7-46A0A075B6I9 117 aa9.38□□□□□ -0.91
CHRFAM7A-203ENST00000401522 FAT1Q14517 4588 aa9.37□□□□□ -0.91
CHRFAM7A-203ENST00000401522 MRPL34Q9BQ48 92 aaKnown RBP9.36□□□□□ -0.91
CHRFAM7A-203ENST00000401522 NDUFS5O43920 106 aa9.34□□□□□ -0.91
CHRFAM7A-203ENST00000401522 PSPHP1O15172 72 aa9.33□□□□□ -0.92
CHRFAM7A-203ENST00000401522 CD164Q04900 197 aa9.33□□□□□ -0.92
CHRFAM7A-203ENST00000401522 C1orf195Q5TG92 126 aa9.33□□□□□ -0.92
CHRFAM7A-203ENST00000401522 SPINK6Q6UWN8 80 aa9.32□□□□□ -0.92
CHRFAM7A-203ENST00000401522 PCOTHQ58A44 107 aa9.3□□□□□ -0.92
CHRFAM7A-203ENST00000401522 COA5Q86WW8 74 aa9.3□□□□□ -0.92
CHRFAM7A-203ENST00000401522 LIMD2Q9BT23 127 aa9.29□□□□□ -0.92
CHRFAM7A-203ENST00000401522 SSBP3-AS1Q7Z2R9 100 aa9.29□□□□□ -0.92
CHRFAM7A-203ENST00000401522 A0A087X002 238 aa9.28□□□□□ -0.92
CHRFAM7A-203ENST00000401522 NOTCH2NLQ7Z3S9 236 aa9.28□□□□□ -0.92
CHRFAM7A-203ENST00000401522 Q8N9P0 234 aaPredicted RBP9.28□□□□□ -0.92
CHRFAM7A-203ENST00000401522 A8MUN3 132 aa9.27□□□□□ -0.93
CHRFAM7A-203ENST00000401522 KRTAP4-5Q9BYR2 181 aa9.25□□□□□ -0.93
CHRFAM7A-203ENST00000401522 HERC2O95714 4834 aa9.24□□□□□ -0.93
CHRFAM7A-203ENST00000401522 LOC101927531A0A1B0GV80 90 aa9.23□□□□□ -0.93
CHRFAM7A-203ENST00000401522 C8orf87E5RJ46 101 aa9.23□□□□□ -0.93
CHRFAM7A-203ENST00000401522 Q5VV11 94 aa9.23□□□□□ -0.93
CHRFAM7A-203ENST00000401522 KRTAP1-4P0C5Y4 121 aa9.19□□□□□ -0.94
CHRFAM7A-203ENST00000401522 KRTAP13-3Q3SY46 172 aa9.19□□□□□ -0.94
CHRFAM7A-203ENST00000401522 PRR15LQ9BU68 103 aa9.19□□□□□ -0.94
CHRFAM7A-203ENST00000401522 Q5W150 140 aa9.16□□□□□ -0.94
CHRFAM7A-203ENST00000401522 PKHD1L1Q86WI1 4243 aa9.16□□□□□ -0.94
CHRFAM7A-203ENST00000401522 CHKB-CPT1BH3BT56 60 aa9.15□□□□□ -0.95
CHRFAM7A-203ENST00000401522 HRES1P13985 223 aa9.14□□□□□ -0.95
CHRFAM7A-203ENST00000401522 Q75L30 129 aa9.14□□□□□ -0.95
CHRFAM7A-203ENST00000401522 LINC00313P59037 77 aa9.11□□□□□ -0.95
CHRFAM7A-203ENST00000401522 KRTAP13-2Q52LG2 175 aa9.11□□□□□ -0.95
CHRFAM7A-203ENST00000401522 LINC01558Q9Y6Z2 57 aa9.11□□□□□ -0.95
CHRFAM7A-203ENST00000401522 ABCA13Q86UQ4 5058 aa9.09□□□□□ -0.96
CHRFAM7A-203ENST00000401522 FLG2Q5D862 2391 aaPredicted RBP9.08□□□□□ -0.96
CHRFAM7A-203ENST00000401522 SPAG11AQ6PDA7 123 aa9.07□□□□□ -0.96
CHRFAM7A-203ENST00000401522 PRR26Q8N8Z3 221 aa9.07□□□□□ -0.96
CHRFAM7A-203ENST00000401522 MYCBP2O75592 4640 aa9.03□□□□□ -0.96
CHRFAM7A-203ENST00000401522 LRP1Q07954 4544 aaKnown RBP9.03□□□□□ -0.96
CHRFAM7A-203ENST00000401522 A6NED7 52 aa9.03□□□□□ -0.96
CHRFAM7A-203ENST00000401522 ACYP2P14621 99 aa9.03□□□□□ -0.96
CHRFAM7A-203ENST00000401522 KRTAP10-8P60410 259 aa9.03□□□□□ -0.96
CHRFAM7A-203ENST00000401522 TYMSOSQ8TAI1 123 aa9.01□□□□□ -0.97
CHRFAM7A-203ENST00000401522 A8MU10 97 aa8.99□□□□□ -0.97
CHRFAM7A-203ENST00000401522 DMAC1Q96GE9 116 aa8.99□□□□□ -0.97
CHRFAM7A-203ENST00000401522 KRTAP16-1A8MUX0 517 aa8.99□□□□□ -0.97
CHRFAM7A-203ENST00000401522 IGKV2-30P06310 120 aa8.99□□□□□ -0.97
CHRFAM7A-203ENST00000401522 MT1HL1P0DM35 61 aa8.99□□□□□ -0.97
CHRFAM7A-203ENST00000401522 FAT3Q8TDW7 4589 aa8.99□□□□□ -0.97
CHRFAM7A-203ENST00000401522 LCA10Q71F78 164 aa8.97□□□□□ -0.97
CHRFAM7A-203ENST00000401522 PCLOQ9Y6V0 5065 aa8.97□□□□□ -0.97
CHRFAM7A-203ENST00000401522 CDC42SE1Q9NRR8 79 aa8.96□□□□□ -0.97
CHRFAM7A-203ENST00000401522 PMAIP1Q13794 54 aa8.95□□□□□ -0.98
CHRFAM7A-203ENST00000401522 C4orf48Q5BLP8 95 aa8.95□□□□□ -0.98
CHRFAM7A-203ENST00000401522 ATP11AUNQ6ZP68 121 aa8.95□□□□□ -0.98
CHRFAM7A-203ENST00000401522 RETNLBQ9BQ08 111 aa8.94□□□□□ -0.98
CHRFAM7A-203ENST00000401522 TNXBP22105 4242 aa8.93□□□□□ -0.98
CHRFAM7A-203ENST00000401522 SPINK1P00995 79 aa8.92□□□□□ -0.98
CHRFAM7A-203ENST00000401522 LINC00304Q8N9R0 145 aa8.92□□□□□ -0.98
CHRFAM7A-203ENST00000401522 SPTSSBQ8NFR3 76 aa8.9□□□□□ -0.99
CHRFAM7A-203ENST00000401522 J3QL48 77 aa8.89□□□□□ -0.99
CHRFAM7A-203ENST00000401522 SPINK7P58062 85 aa8.88□□□□□ -0.99
CHRFAM7A-203ENST00000401522 RPS29P62273 56 aaKnown RBP8.84□□□□□ -0.99
CHRFAM7A-203ENST00000401522 IGKV2D-30A0A075B6S6 120 aa8.84□□□□□ -1
CHRFAM7A-203ENST00000401522 DMBT1Q9UGM3 2413 aaPredicted RBP8.83□□□□□ -1
CHRFAM7A-203ENST00000401522 A6NN06 94 aa8.8□□□□□ -1
CHRFAM7A-203ENST00000401522 KTN1-AS1Q86SY8 53 aa8.77□□□□□ -1.01
CHRFAM7A-203ENST00000401522 A0A1B0GU69 56 aa8.76□□□□□ -1.01
CHRFAM7A-203ENST00000401522 C7orf65Q6ZTY9 151 aa8.76□□□□□ -1.01
CHRFAM7A-203ENST00000401522 SEC61GP60059 68 aa8.68□□□□□ -1.02
CHRFAM7A-203ENST00000401522 SPATA8Q6RVD6 105 aa8.64□□□□□ -1.03
CHRFAM7A-203ENST00000401522 A8MUU9 505 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms