RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 IGLV5-48A0A075B6I7 105 aa6.97□□□□□ -1.29
SKA3-203ENST00000400018 MOBPQ13875 183 aa6.97□□□□□ -1.29
SKA3-203ENST00000400018 A8MUN3 132 aa6.96□□□□□ -1.29
SKA3-203ENST00000400018 BIRC6Q9NR09 4857 aa6.96□□□□□ -1.3
SKA3-203ENST00000400018 H0Y9J4 135 aa6.94□□□□□ -1.3
SKA3-203ENST00000400018 PRR4Q16378 134 aa6.94□□□□□ -1.3
SKA3-203ENST00000400018 KRTAP1-4P0C5Y4 121 aa6.93□□□□□ -1.3
SKA3-203ENST00000400018 KTN1-AS1Q86SY8 53 aa6.93□□□□□ -1.3
SKA3-203ENST00000400018 PRR26Q8N8Z3 221 aa6.93□□□□□ -1.3
SKA3-203ENST00000400018 DEFB116Q30KQ4 102 aa6.93□□□□□ -1.3
SKA3-203ENST00000400018 KRTAP13-2Q52LG2 175 aa6.93□□□□□ -1.3
SKA3-203ENST00000400018 IGFL1Q6UW32 110 aa6.93□□□□□ -1.3
SKA3-203ENST00000400018 IGKV4-1P06312 121 aa6.92□□□□□ -1.3
SKA3-203ENST00000400018 DMBT1Q9UGM3 2413 aaPredicted RBP6.92□□□□□ -1.3
SKA3-203ENST00000400018 PLA2G1BP04054 148 aaKnown RBP6.92□□□□□ -1.3
SKA3-203ENST00000400018 A0A1W2PNM2 257 aa6.92□□□□□ -1.3
SKA3-203ENST00000400018 SPTSSBQ8NFR3 76 aa6.91□□□□□ -1.3
SKA3-203ENST00000400018 PDE6GP18545 87 aa6.9□□□□□ -1.3
SKA3-203ENST00000400018 HERC2O95714 4834 aa6.89□□□□□ -1.31
SKA3-203ENST00000400018 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
SKA3-203ENST00000400018 Q5VV11 94 aa6.88□□□□□ -1.31
SKA3-203ENST00000400018 FAT3Q8TDW7 4589 aa6.88□□□□□ -1.31
SKA3-203ENST00000400018 CDK2AP2O75956 126 aa6.88□□□□□ -1.31
SKA3-203ENST00000400018 TNXBP22105 4242 aa6.86□□□□□ -1.31
SKA3-203ENST00000400018 PCLOQ9Y6V0 5065 aa6.86□□□□□ -1.31
SKA3-203ENST00000400018 CHKB-CPT1BH3BT56 60 aa6.86□□□□□ -1.31
SKA3-203ENST00000400018 A0A087WSZ3 146 aa6.85□□□□□ -1.31
SKA3-203ENST00000400018 LINC00483Q53H64 154 aa6.85□□□□□ -1.31
SKA3-203ENST00000400018 SPRR1BP22528 89 aa6.85□□□□□ -1.31
SKA3-203ENST00000400018 Q8NBF4 154 aa6.85□□□□□ -1.31
SKA3-203ENST00000400018 HCG22E2RYF7 251 aa6.83□□□□□ -1.32
SKA3-203ENST00000400018 SPINK6Q6UWN8 80 aa6.83□□□□□ -1.32
SKA3-203ENST00000400018 ZNF706Q9Y5V0 76 aaPredicted RBP6.82□□□□□ -1.32
SKA3-203ENST00000400018 Q8N1X5 172 aa6.82□□□□□ -1.32
SKA3-203ENST00000400018 LCA10Q71F78 164 aa6.8□□□□□ -1.32
SKA3-203ENST00000400018 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
SKA3-203ENST00000400018 ZCCHC13Q8WW36 166 aaKnown RBP6.8□□□□□ -1.32
SKA3-203ENST00000400018 RETNLBQ9BQ08 111 aa6.79□□□□□ -1.32
SKA3-203ENST00000400018 C8orf87E5RJ46 101 aa6.78□□□□□ -1.32
SKA3-203ENST00000400018 NDUFS5O43920 106 aa6.78□□□□□ -1.32
SKA3-203ENST00000400018 PRR15LQ9BU68 103 aa6.78□□□□□ -1.32
SKA3-203ENST00000400018 CYP4F30PQ9H0H9 118 aa6.78□□□□□ -1.32
SKA3-203ENST00000400018 A6NN06 94 aa6.78□□□□□ -1.32
SKA3-203ENST00000400018 H3BS24 57 aa6.77□□□□□ -1.33
SKA3-203ENST00000400018 ATP11AUNQ6ZP68 121 aa6.77□□□□□ -1.33
SKA3-203ENST00000400018 IGLV8-61A0A075B6I0 122 aa6.76□□□□□ -1.33
SKA3-203ENST00000400018 Q8N9P0 234 aaPredicted RBP6.76□□□□□ -1.33
SKA3-203ENST00000400018 H3BQ85 93 aa6.76□□□□□ -1.33
SKA3-203ENST00000400018 A6NED7 52 aa6.75□□□□□ -1.33
SKA3-203ENST00000400018 HERC1Q15751 4861 aa6.74□□□□□ -1.33
SKA3-203ENST00000400018 C7orf65Q6ZTY9 151 aa6.73□□□□□ -1.33
SKA3-203ENST00000400018 LIMD2Q9BT23 127 aa6.72□□□□□ -1.33
SKA3-203ENST00000400018 LPAP08519 4548 aa6.71□□□□□ -1.34
SKA3-203ENST00000400018 LINC00304Q8N9R0 145 aa6.69□□□□□ -1.34
SKA3-203ENST00000400018 LINC00208Q96KT6 92 aa6.69□□□□□ -1.34
SKA3-203ENST00000400018 K7EQZ3 153 aa6.68□□□□□ -1.34
SKA3-203ENST00000400018 MT1HL1P0DM35 61 aa6.68□□□□□ -1.34
SKA3-203ENST00000400018 Q96NJ1 140 aa6.68□□□□□ -1.34
SKA3-203ENST00000400018 Q75L30 129 aa6.67□□□□□ -1.34
SKA3-203ENST00000400018 SSBP3-AS1Q7Z2R9 100 aa6.67□□□□□ -1.34
SKA3-203ENST00000400018 NOTCH2NLQ7Z3S9 236 aa6.67□□□□□ -1.34
SKA3-203ENST00000400018 NDUFB1O75438 58 aa6.67□□□□□ -1.34
SKA3-203ENST00000400018 CDC42SE1Q9NRR8 79 aa6.66□□□□□ -1.34
SKA3-203ENST00000400018 DSCR10P59022 87 aa6.66□□□□□ -1.34
SKA3-203ENST00000400018 LINC00472Q9H8W2 130 aa6.64□□□□□ -1.35
SKA3-203ENST00000400018 KRTAP10-8P60410 259 aa6.64□□□□□ -1.35
SKA3-203ENST00000400018 PRAC1Q96KF2 57 aa6.63□□□□□ -1.35
SKA3-203ENST00000400018 LOC101927531A0A1B0GV80 90 aa6.62□□□□□ -1.35
SKA3-203ENST00000400018 MP68P56378 58 aa6.62□□□□□ -1.35
SKA3-203ENST00000400018 WFDC13Q8IUB5 93 aa6.62□□□□□ -1.35
SKA3-203ENST00000400018 IGHV6-1A0A0B4J1U7 121 aa6.61□□□□□ -1.35
SKA3-203ENST00000400018 LINC00313P59037 77 aa6.6□□□□□ -1.35
SKA3-203ENST00000400018 LRP2P98164 4655 aa6.59□□□□□ -1.35
SKA3-203ENST00000400018 C9orf92A6NGG3 77 aa6.59□□□□□ -1.35
SKA3-203ENST00000400018 COA5Q86WW8 74 aa6.58□□□□□ -1.36
SKA3-203ENST00000400018 SPINK7P58062 85 aa6.57□□□□□ -1.36
SKA3-203ENST00000400018 ADM2Q7Z4H4 148 aa6.57□□□□□ -1.36
SKA3-203ENST00000400018 SPAG11AQ6PDA7 123 aa6.57□□□□□ -1.36
SKA3-203ENST00000400018 SPANXA2-OT1Q8N9U9 137 aa6.57□□□□□ -1.36
SKA3-203ENST00000400018 SPINK1P00995 79 aa6.56□□□□□ -1.36
SKA3-203ENST00000400018 H0Y9P7 68 aa6.55□□□□□ -1.36
SKA3-203ENST00000400018 J3QL48 77 aa6.54□□□□□ -1.36
SKA3-203ENST00000400018 LINC01554Q52M75 96 aa6.54□□□□□ -1.36
SKA3-203ENST00000400018 A8MWP4 228 aa6.51□□□□□ -1.37
SKA3-203ENST00000400018 A0A1B0GW54 56 aa6.5□□□□□ -1.37
SKA3-203ENST00000400018 LINC01558Q9Y6Z2 57 aa6.5□□□□□ -1.37
SKA3-203ENST00000400018 A0A1B0GVX0 72 aa6.48□□□□□ -1.37
SKA3-203ENST00000400018 CASC2Q6XLA1 102 aa6.48□□□□□ -1.37
SKA3-203ENST00000400018 MMP24-AS1A0A0U1RRL7 71 aa6.48□□□□□ -1.37
SKA3-203ENST00000400018 MUC2Q02817 5179 aa6.47□□□□□ -1.37
SKA3-203ENST00000400018 PCOTHQ58A44 107 aa6.47□□□□□ -1.37
SKA3-203ENST00000400018 C8orf17Q9NRJ1 99 aa6.46□□□□□ -1.38
SKA3-203ENST00000400018 KRTAP29-1A8MX34 341 aaPredicted RBP6.46□□□□□ -1.38
SKA3-203ENST00000400018 IGLV7-46A0A075B6I9 117 aa6.45□□□□□ -1.38
SKA3-203ENST00000400018 H3BPC8 53 aa6.44□□□□□ -1.38
SKA3-203ENST00000400018 ASB16-AS1Q495Z4 193 aa6.42□□□□□ -1.38
SKA3-203ENST00000400018 HMCN2Q8NDA2 5059 aa6.39□□□□□ -1.39
SKA3-203ENST00000400018 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
SKA3-203ENST00000400018 KRTAP16-1A8MUX0 517 aa6.38□□□□□ -1.39
SKA3-203ENST00000400018 HRES1P13985 223 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms