RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 DCHS1Q96JQ0 3298 aa7.81□□□□□ -1.16
ITSN1-208ENST00000399349 Q5VSD8 79 aa7.79□□□□□ -1.16
ITSN1-208ENST00000399349 KRTAP4-16G5E9R7 235 aaPredicted RBP7.78□□□□□ -1.16
ITSN1-208ENST00000399349 NF1P21359 2839 aa7.78□□□□□ -1.16
ITSN1-208ENST00000399349 ASPMQ8IZT6 3477 aa7.77□□□□□ -1.17
ITSN1-208ENST00000399349 FBN2P35556 2912 aa7.75□□□□□ -1.17
ITSN1-208ENST00000399349 NIPBLQ6KC79 2804 aaeCLIP7.75□□□□□ -1.17
ITSN1-208ENST00000399349 A0A087X002 238 aa7.75□□□□□ -1.17
ITSN1-208ENST00000399349 DCHS2Q6V1P9 2916 aa7.75□□□□□ -1.17
ITSN1-208ENST00000399349 LINC00483Q53H64 154 aa7.74□□□□□ -1.17
ITSN1-208ENST00000399349 ZFHX4Q86UP3 3567 aa7.73□□□□□ -1.17
ITSN1-208ENST00000399349 NOTCH2NLQ7Z3S9 236 aa7.73□□□□□ -1.17
ITSN1-208ENST00000399349 KRTAP29-1A8MX34 341 aaPredicted RBP7.73□□□□□ -1.17
ITSN1-208ENST00000399349 A6NN06 94 aa7.7□□□□□ -1.18
ITSN1-208ENST00000399349 RPL37P61927 97 aaKnown RBP7.7□□□□□ -1.18
ITSN1-208ENST00000399349 LCE6AA0A183 80 aa7.7□□□□□ -1.18
ITSN1-208ENST00000399349 KRTAP11-1Q8IUC1 163 aa7.69□□□□□ -1.18
ITSN1-208ENST00000399349 SPATA8Q6RVD6 105 aa7.69□□□□□ -1.18
ITSN1-208ENST00000399349 LAMA5O15230 3695 aa7.68□□□□□ -1.18
ITSN1-208ENST00000399349 SEC61BP60468 96 aaKnown RBP7.67□□□□□ -1.18
ITSN1-208ENST00000399349 M0QZ58 72 aa7.67□□□□□ -1.18
ITSN1-208ENST00000399349 Q6ZR54 194 aa7.67□□□□□ -1.18
ITSN1-208ENST00000399349 SPENQ96T58 3664 aaKnown RBP7.65□□□□□ -1.18
ITSN1-208ENST00000399349 H1FX-AS1Q4G0G2 97 aa7.64□□□□□ -1.19
ITSN1-208ENST00000399349 TENM3Q9P273 2699 aa7.64□□□□□ -1.19
ITSN1-208ENST00000399349 ADM2Q7Z4H4 148 aa7.62□□□□□ -1.19
ITSN1-208ENST00000399349 HRNRQ86YZ3 2850 aaPredicted RBP7.62□□□□□ -1.19
ITSN1-208ENST00000399349 ROMO1P60602 79 aa7.61□□□□□ -1.19
ITSN1-208ENST00000399349 KRTAP7-1Q8IUC3 87 aa7.59□□□□□ -1.19
ITSN1-208ENST00000399349 BSNQ9UPA5 3926 aa7.53□□□□□ -1.2
ITSN1-208ENST00000399349 Q6ZRN7 208 aaPredicted RBP7.52□□□□□ -1.21
ITSN1-208ENST00000399349 MXRA5Q9NR99 2828 aa7.5□□□□□ -1.21
ITSN1-208ENST00000399349 A0A0A0MQY5 61 aa7.5□□□□□ -1.21
ITSN1-208ENST00000399349 ASB16-AS1Q495Z4 193 aa7.48□□□□□ -1.21
ITSN1-208ENST00000399349 CELSR1Q9NYQ6 3014 aa7.48□□□□□ -1.21
ITSN1-208ENST00000399349 SMG1Q96Q15 3661 aaKnown RBP7.48□□□□□ -1.21
ITSN1-208ENST00000399349 KRTAP13-2Q52LG2 175 aa7.46□□□□□ -1.22
ITSN1-208ENST00000399349 TENM1Q9UKZ4 2725 aa7.45□□□□□ -1.22
ITSN1-208ENST00000399349 RELNP78509 3460 aa7.43□□□□□ -1.22
ITSN1-208ENST00000399349 CSMD1Q96PZ7 3565 aa7.4□□□□□ -1.22
ITSN1-208ENST00000399349 PLAC4Q8WY50 150 aa7.4□□□□□ -1.22
ITSN1-208ENST00000399349 KRTAP13-1Q8IUC0 172 aa7.39□□□□□ -1.23
ITSN1-208ENST00000399349 PKD1L1Q8TDX9 2849 aa7.38□□□□□ -1.23
ITSN1-208ENST00000399349 A8MUU9 505 aa7.35□□□□□ -1.23
ITSN1-208ENST00000399349 CUBNO60494 3623 aa7.31□□□□□ -1.24
ITSN1-208ENST00000399349 KRTAP25-1Q3LHN0 102 aa7.31□□□□□ -1.24
ITSN1-208ENST00000399349 PDZD2O15018 2839 aa7.31□□□□□ -1.24
ITSN1-208ENST00000399349 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
ITSN1-208ENST00000399349 VWFP04275 2813 aa7.26□□□□□ -1.25
ITSN1-208ENST00000399349 TENM2Q9NT68 2774 aa7.26□□□□□ -1.25
ITSN1-208ENST00000399349 C20orf166-AS1Q96NR2 134 aa7.26□□□□□ -1.25
ITSN1-208ENST00000399349 NDUFAF8A1L188 74 aa7.18□□□□□ -1.26
ITSN1-208ENST00000399349 SRRM2Q9UQ35 2752 aaKnown RBP7.17□□□□□ -1.26
ITSN1-208ENST00000399349 TGP01266 2768 aa7.16□□□□□ -1.26
ITSN1-208ENST00000399349 SVEP1Q4LDE5 3571 aa7.16□□□□□ -1.26
ITSN1-208ENST00000399349 KRTAP16-1A8MUX0 517 aa7.14□□□□□ -1.27
ITSN1-208ENST00000399349 KRTAP1-4P0C5Y4 121 aa7.07□□□□□ -1.28
ITSN1-208ENST00000399349 VPS13CQ709C8 3753 aa7.05□□□□□ -1.28
ITSN1-208ENST00000399349 TNP1P09430 55 aa7.04□□□□□ -1.28
ITSN1-208ENST00000399349 C10orf95Q9H7T3 257 aa7.04□□□□□ -1.28
ITSN1-208ENST00000399349 FBN1P35555 2871 aaKnown RBP7.03□□□□□ -1.28
ITSN1-208ENST00000399349 XP32Q5T750 250 aa7□□□□□ -1.29
ITSN1-208ENST00000399349 ZFHX3Q15911 3703 aa7□□□□□ -1.29
ITSN1-208ENST00000399349 A0A1B0GVY2 172 aa7□□□□□ -1.29
ITSN1-208ENST00000399349 CSMD2Q7Z408 3487 aa6.99□□□□□ -1.29
ITSN1-208ENST00000399349 H0YAA0 97 aa6.96□□□□□ -1.3
ITSN1-208ENST00000399349 KRTAP10-8P60410 259 aa6.94□□□□□ -1.3
ITSN1-208ENST00000399349 KRTAP21-3Q3LHN1 58 aa6.87□□□□□ -1.31
ITSN1-208ENST00000399349 P0C880 135 aa6.83□□□□□ -1.32
ITSN1-208ENST00000399349 NBPF19A0A087WUL8 3843 aa6.82□□□□□ -1.32
ITSN1-208ENST00000399349 KRTAP13-3Q3SY46 172 aa6.82□□□□□ -1.32
ITSN1-208ENST00000399349 ZNF469Q96JG9 3925 aaPredicted RBP6.79□□□□□ -1.32
ITSN1-208ENST00000399349 TPRXLQ17RH7 258 aa6.76□□□□□ -1.33
ITSN1-208ENST00000399349 OTOGQ6ZRI0 2925 aa6.76□□□□□ -1.33
ITSN1-208ENST00000399349 PP632Q6XCG6 107 aa6.75□□□□□ -1.33
ITSN1-208ENST00000399349 KRTAP10-10P60014 251 aa6.75□□□□□ -1.33
ITSN1-208ENST00000399349 FBN3Q75N90 2809 aa6.75□□□□□ -1.33
ITSN1-208ENST00000399349 AKAP9Q99996 3911 aa6.7□□□□□ -1.34
ITSN1-208ENST00000399349 ANK3Q12955 4377 aaKnown RBP6.69□□□□□ -1.34
ITSN1-208ENST00000399349 COL7A1Q02388 2944 aa6.67□□□□□ -1.34
ITSN1-208ENST00000399349 MEGF8Q7Z7M0 2845 aa6.61□□□□□ -1.35
ITSN1-208ENST00000399349 KRTAP12-2P59991 146 aa6.53□□□□□ -1.36
ITSN1-208ENST00000399349 PRO2289Q9P1D8 64 aa6.5□□□□□ -1.37
ITSN1-208ENST00000399349 TRRAPQ9Y4A5 3859 aa6.44□□□□□ -1.38
ITSN1-208ENST00000399349 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
ITSN1-208ENST00000399349 KRTAP12-1P59990 96 aa6.39□□□□□ -1.39
ITSN1-208ENST00000399349 KRTAP13-4Q3LI77 160 aa6.31□□□□□ -1.4
ITSN1-208ENST00000399349 KRTAP10-6P60371 365 aaPredicted RBP6.26□□□□□ -1.41
ITSN1-208ENST00000399349 CSMD3Q7Z407 3707 aa6.22□□□□□ -1.41
ITSN1-208ENST00000399349 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
ITSN1-208ENST00000399349 CMYA5Q8N3K9 4069 aa6.15□□□□□ -1.43
ITSN1-208ENST00000399349 ANK2Q01484 3957 aa6.13□□□□□ -1.43
ITSN1-208ENST00000399349 DNAH3Q8TD57 4116 aa6.09□□□□□ -1.43
ITSN1-208ENST00000399349 HUWE1Q7Z6Z7 4374 aaKnown RBP6.08□□□□□ -1.44
ITSN1-208ENST00000399349 KRTAP3-2Q9BYR7 98 aa6.06□□□□□ -1.44
ITSN1-208ENST00000399349 MT1HL1P0DM35 61 aa6.04□□□□□ -1.44
ITSN1-208ENST00000399349 KRTAP3-3Q9BYR6 98 aa6.01□□□□□ -1.45
ITSN1-208ENST00000399349 DNAH9Q9NYC9 4486 aa5.95□□□□□ -1.46
ITSN1-208ENST00000399349 KRTAP4-5Q9BYR2 181 aa5.93□□□□□ -1.46
ITSN1-208ENST00000399349 DNAH1Q9P2D7 4330 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms