RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 BPY2O14599 106 aa9.87□□□□□ -0.83
SMIM11A-202ENST00000399295 IMUPQ9GZP8 106 aa9.87□□□□□ -0.83
SMIM11A-202ENST00000399295 Q5XG85 94 aa9.86□□□□□ -0.83
SMIM11A-202ENST00000399295 LIMD2Q9BT23 127 aa9.86□□□□□ -0.83
SMIM11A-202ENST00000399295 ASB16-AS1Q495Z4 193 aa9.85□□□□□ -0.83
SMIM11A-202ENST00000399295 IGKV3D-7A0A0C4DH55 119 aa9.84□□□□□ -0.83
SMIM11A-202ENST00000399295 J3KT08 172 aa9.84□□□□□ -0.83
SMIM11A-202ENST00000399295 LINC00472Q9H8W2 130 aa9.83□□□□□ -0.84
SMIM11A-202ENST00000399295 Q96NJ1 140 aa9.77□□□□□ -0.85
SMIM11A-202ENST00000399295 HIST1H4AP62805 103 aaKnown RBP9.76□□□□□ -0.85
SMIM11A-202ENST00000399295 KRTAP13-3Q3SY46 172 aa9.76□□□□□ -0.85
SMIM11A-202ENST00000399295 DSCR10P59022 87 aa9.75□□□□□ -0.85
SMIM11A-202ENST00000399295 IGKV4-1P06312 121 aa9.74□□□□□ -0.85
SMIM11A-202ENST00000399295 DEFB116Q30KQ4 102 aa9.74□□□□□ -0.85
SMIM11A-202ENST00000399295 A8MWP4 228 aa9.73□□□□□ -0.85
SMIM11A-202ENST00000399295 NDUFB1O75438 58 aa9.73□□□□□ -0.85
SMIM11A-202ENST00000399295 SCGB1A1P11684 91 aa9.71□□□□□ -0.86
SMIM11A-202ENST00000399295 C1orf195Q5TG92 126 aa9.69□□□□□ -0.86
SMIM11A-202ENST00000399295 A0A0U1RQV1 116 aa9.68□□□□□ -0.86
SMIM11A-202ENST00000399295 K7EQZ3 153 aa9.68□□□□□ -0.86
SMIM11A-202ENST00000399295 PRR15Q8IV56 129 aa9.68□□□□□ -0.86
SMIM11A-202ENST00000399295 Q8N9L7 120 aa9.68□□□□□ -0.86
SMIM11A-202ENST00000399295 MUC17Q685J3 4493 aa9.67□□□□□ -0.86
SMIM11A-202ENST00000399295 A0A087WVE0 104 aa9.66□□□□□ -0.86
SMIM11A-202ENST00000399295 LCE2AQ5TA79 106 aaPredicted RBP9.66□□□□□ -0.86
SMIM11A-202ENST00000399295 MUC2Q02817 5179 aa9.65□□□□□ -0.86
SMIM11A-202ENST00000399295 A0A1B0GVX0 72 aa9.64□□□□□ -0.87
SMIM11A-202ENST00000399295 FAM236AA0A1B0GUQ0 79 aa9.62□□□□□ -0.87
SMIM11A-202ENST00000399295 FAM236BA0A1B0GV22 79 aa9.62□□□□□ -0.87
SMIM11A-202ENST00000399295 HCG22E2RYF7 251 aa9.6□□□□□ -0.87
SMIM11A-202ENST00000399295 C9orf92A6NGG3 77 aa9.59□□□□□ -0.87
SMIM11A-202ENST00000399295 C8orf87E5RJ46 101 aa9.59□□□□□ -0.87
SMIM11A-202ENST00000399295 XP32Q5T750 250 aa9.59□□□□□ -0.87
SMIM11A-202ENST00000399295 IGHV6-1A0A0B4J1U7 121 aa9.58□□□□□ -0.88
SMIM11A-202ENST00000399295 SEC61BP60468 96 aaKnown RBP9.58□□□□□ -0.88
SMIM11A-202ENST00000399295 ATOX1O00244 68 aa9.56□□□□□ -0.88
SMIM11A-202ENST00000399295 C8orf17Q9NRJ1 99 aa9.56□□□□□ -0.88
SMIM11A-202ENST00000399295 KRTAP4-8Q9BYQ9 185 aa9.55□□□□□ -0.88
SMIM11A-202ENST00000399295 MMP24-AS1A0A0U1RRL7 71 aa9.54□□□□□ -0.88
SMIM11A-202ENST00000399295 CASC2Q6XLA1 102 aa9.54□□□□□ -0.88
SMIM11A-202ENST00000399295 hDV103S1A0JD37 113 aa9.52□□□□□ -0.89
SMIM11A-202ENST00000399295 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.52□□□□□ -0.89
SMIM11A-202ENST00000399295 SMIM20Q8N5G0 67 aa9.52□□□□□ -0.89
SMIM11A-202ENST00000399295 LINC00313P59037 77 aa9.51□□□□□ -0.89
SMIM11A-202ENST00000399295 WFDC13Q8IUB5 93 aa9.51□□□□□ -0.89
SMIM11A-202ENST00000399295 TMEM254Q8TBM7 123 aa9.49□□□□□ -0.89
SMIM11A-202ENST00000399295 KRTAP9-2Q9BYQ4 174 aa9.49□□□□□ -0.89
SMIM11A-202ENST00000399295 MRPL34Q9BQ48 92 aaKnown RBP9.46□□□□□ -0.9
SMIM11A-202ENST00000399295 ANAPC13Q9BS18 74 aa9.46□□□□□ -0.9
SMIM11A-202ENST00000399295 NOTCH2NLQ7Z3S9 236 aa9.45□□□□□ -0.9
SMIM11A-202ENST00000399295 TRAV7A0A075B6U4 112 aa9.43□□□□□ -0.9
SMIM11A-202ENST00000399295 KRTAP9-6A0A140TA67 174 aa9.41□□□□□ -0.9
SMIM11A-202ENST00000399295 PCOTHQ58A44 107 aa9.41□□□□□ -0.9
SMIM11A-202ENST00000399295 SERP2Q8N6R1 65 aa9.41□□□□□ -0.9
SMIM11A-202ENST00000399295 KRTAP4-1Q9BYQ7 146 aa9.41□□□□□ -0.9
SMIM11A-202ENST00000399295 OCR1Q9BZK8 76 aa9.41□□□□□ -0.9
SMIM11A-202ENST00000399295 TP53AIP1Q9HCN2 124 aa9.4□□□□□ -0.9
SMIM11A-202ENST00000399295 RPL37P61927 97 aaKnown RBP9.39□□□□□ -0.91
SMIM11A-202ENST00000399295 KRTAP16-1A8MUX0 517 aa9.38□□□□□ -0.91
SMIM11A-202ENST00000399295 UQCRQO14949 82 aa9.37□□□□□ -0.91
SMIM11A-202ENST00000399295 FAT4Q6V0I7 4981 aa9.36□□□□□ -0.91
SMIM11A-202ENST00000399295 NDUFS5O43920 106 aa9.36□□□□□ -0.91
SMIM11A-202ENST00000399295 Q8N9P0 234 aaPredicted RBP9.36□□□□□ -0.91
SMIM11A-202ENST00000399295 COX7CP15954 63 aa9.35□□□□□ -0.91
SMIM11A-202ENST00000399295 PCP4P48539 62 aa9.35□□□□□ -0.91
SMIM11A-202ENST00000399295 C5orf47Q569G3 176 aa9.31□□□□□ -0.92
SMIM11A-202ENST00000399295 Q75L30 129 aa9.3□□□□□ -0.92
SMIM11A-202ENST00000399295 C20orf166-AS1Q96NR2 134 aa9.28□□□□□ -0.92
SMIM11A-202ENST00000399295 A8MUU9 505 aa9.26□□□□□ -0.93
SMIM11A-202ENST00000399295 MP68P56378 58 aa9.26□□□□□ -0.93
SMIM11A-202ENST00000399295 ATP11AUNQ6ZP68 121 aa9.26□□□□□ -0.93
SMIM11A-202ENST00000399295 TRAV22A0A0B4J277 110 aa9.25□□□□□ -0.93
SMIM11A-202ENST00000399295 H3BPC8 53 aa9.24□□□□□ -0.93
SMIM11A-202ENST00000399295 H0Y9P7 68 aa9.23□□□□□ -0.93
SMIM11A-202ENST00000399295 CCDC179H3BU77 68 aa9.2□□□□□ -0.94
SMIM11A-202ENST00000399295 C20orf197Q8N268 126 aa9.2□□□□□ -0.94
SMIM11A-202ENST00000399295 KLKP1Q107X0 134 aa9.18□□□□□ -0.94
SMIM11A-202ENST00000399295 ZCCHC13Q8WW36 166 aaKnown RBP9.17□□□□□ -0.94
SMIM11A-202ENST00000399295 Q5W150 140 aa9.16□□□□□ -0.94
SMIM11A-202ENST00000399295 LINC00208Q96KT6 92 aa9.15□□□□□ -0.94
SMIM11A-202ENST00000399295 LOC101927531A0A1B0GV80 90 aa9.13□□□□□ -0.95
SMIM11A-202ENST00000399295 KRTAP19-2Q3LHN2 52 aa9.13□□□□□ -0.95
SMIM11A-202ENST00000399295 LCE2CQ5TA81 110 aa9.13□□□□□ -0.95
SMIM11A-202ENST00000399295 C1orf64Q8NEQ6 169 aa9.13□□□□□ -0.95
SMIM11A-202ENST00000399295 NDUFC1O43677 76 aa9.12□□□□□ -0.95
SMIM11A-202ENST00000399295 SNURFQ9Y675 71 aa9.12□□□□□ -0.95
SMIM11A-202ENST00000399295 IGKV2-30P06310 120 aa9.06□□□□□ -0.96
SMIM11A-202ENST00000399295 COX6B2Q6YFQ2 88 aa9.04□□□□□ -0.96
SMIM11A-202ENST00000399295 CYP4F30PQ9H0H9 118 aa9.03□□□□□ -0.96
SMIM11A-202ENST00000399295 C7orf65Q6ZTY9 151 aa9.02□□□□□ -0.97
SMIM11A-202ENST00000399295 H7BZZ5 65 aa9□□□□□ -0.97
SMIM11A-202ENST00000399295 MT1HP80294 61 aa9□□□□□ -0.97
SMIM11A-202ENST00000399295 CYSTM1Q9H1C7 97 aa9□□□□□ -0.97
SMIM11A-202ENST00000399295 IGKV2D-30A0A075B6S6 120 aa8.99□□□□□ -0.97
SMIM11A-202ENST00000399295 KRTAP4-8A0A0G2JLE6 195 aa8.98□□□□□ -0.97
SMIM11A-202ENST00000399295 LCE3BQ5TA77 95 aa8.97□□□□□ -0.97
SMIM11A-202ENST00000399295 KRTAP9-9Q9BYP9 154 aa8.97□□□□□ -0.97
SMIM11A-202ENST00000399295 KRTAP9-4Q9BYQ2 154 aa8.97□□□□□ -0.97
SMIM11A-202ENST00000399295 TMEM258P61165 79 aa8.96□□□□□ -0.98
SMIM11A-202ENST00000399295 SPINK7P58062 85 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms