RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 NBEAQ8NFP9 2946 aa8.05□□□□□ -1.12
PCDHA11-201ENST00000398640 ASB16-AS1Q495Z4 193 aa8.04□□□□□ -1.12
PCDHA11-201ENST00000398640 A8MUU9 505 aa8.03□□□□□ -1.12
PCDHA11-201ENST00000398640 LRBAP50851 2863 aa8.02□□□□□ -1.13
PCDHA11-201ENST00000398640 KRTAP7-1Q8IUC3 87 aa8.02□□□□□ -1.13
PCDHA11-201ENST00000398640 A8MU10 97 aa8.01□□□□□ -1.13
PCDHA11-201ENST00000398640 TACC2O95359 2948 aa8.01□□□□□ -1.13
PCDHA11-201ENST00000398640 DMBT1Q9UGM3 2413 aaPredicted RBP8□□□□□ -1.13
PCDHA11-201ENST00000398640 KRTAP13-2Q52LG2 175 aa7.99□□□□□ -1.13
PCDHA11-201ENST00000398640 CRYBG3Q68DQ2 2970 aa7.99□□□□□ -1.13
PCDHA11-201ENST00000398640 NBEAL2Q6ZNJ1 2754 aa7.98□□□□□ -1.13
PCDHA11-201ENST00000398640 FREM2Q5SZK8 3169 aa7.97□□□□□ -1.13
PCDHA11-201ENST00000398640 KRTAP13-1Q8IUC0 172 aa7.94□□□□□ -1.14
PCDHA11-201ENST00000398640 KALRNO60229 2985 aa7.93□□□□□ -1.14
PCDHA11-201ENST00000398640 ADGRG4Q8IZF6 3080 aa7.93□□□□□ -1.14
PCDHA11-201ENST00000398640 STAB2Q8WWQ8 2551 aa7.88□□□□□ -1.15
PCDHA11-201ENST00000398640 A0A1B0GVY2 172 aa7.87□□□□□ -1.15
PCDHA11-201ENST00000398640 ZZEF1O43149 2961 aa7.86□□□□□ -1.15
PCDHA11-201ENST00000398640 HRNRQ86YZ3 2850 aaPredicted RBP7.8□□□□□ -1.16
PCDHA11-201ENST00000398640 KRTAP25-1Q3LHN0 102 aa7.78□□□□□ -1.16
PCDHA11-201ENST00000398640 MYO15AQ9UKN7 3530 aa7.76□□□□□ -1.17
PCDHA11-201ENST00000398640 ASH1LQ9NR48 2969 aaKnown RBP7.75□□□□□ -1.17
PCDHA11-201ENST00000398640 SPEGQ15772 3267 aa7.75□□□□□ -1.17
PCDHA11-201ENST00000398640 CELSR2Q9HCU4 2923 aa7.74□□□□□ -1.17
PCDHA11-201ENST00000398640 TNP1P09430 55 aa7.73□□□□□ -1.17
PCDHA11-201ENST00000398640 CFAP47Q6ZTR5 3102 aa7.73□□□□□ -1.17
PCDHA11-201ENST00000398640 KRTAP1-4P0C5Y4 121 aa7.71□□□□□ -1.17
PCDHA11-201ENST00000398640 KRTAP10-8P60410 259 aa7.7□□□□□ -1.18
PCDHA11-201ENST00000398640 NIPBLQ6KC79 2804 aaeCLIP7.7□□□□□ -1.18
PCDHA11-201ENST00000398640 A6NN06 94 aa7.7□□□□□ -1.18
PCDHA11-201ENST00000398640 C10orf95Q9H7T3 257 aa7.68□□□□□ -1.18
PCDHA11-201ENST00000398640 LOC400499M0QZD8 3231 aa7.68□□□□□ -1.18
PCDHA11-201ENST00000398640 PDZD2O15018 2839 aa7.67□□□□□ -1.18
PCDHA11-201ENST00000398640 ZANQ9Y493 2812 aa7.66□□□□□ -1.18
PCDHA11-201ENST00000398640 FBN2P35556 2912 aa7.66□□□□□ -1.18
PCDHA11-201ENST00000398640 XP32Q5T750 250 aa7.66□□□□□ -1.18
PCDHA11-201ENST00000398640 KRTAP16-1A8MUX0 517 aa7.65□□□□□ -1.18
PCDHA11-201ENST00000398640 TPRXLQ17RH7 258 aa7.65□□□□□ -1.18
PCDHA11-201ENST00000398640 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
PCDHA11-201ENST00000398640 NDUFAF8A1L188 74 aa7.61□□□□□ -1.19
PCDHA11-201ENST00000398640 NBPF19A0A087WUL8 3843 aa7.61□□□□□ -1.19
PCDHA11-201ENST00000398640 DCHS2Q6V1P9 2916 aa7.58□□□□□ -1.2
PCDHA11-201ENST00000398640 TENM2Q9NT68 2774 aa7.56□□□□□ -1.2
PCDHA11-201ENST00000398640 NF1P21359 2839 aa7.56□□□□□ -1.2
PCDHA11-201ENST00000398640 MXRA5Q9NR99 2828 aa7.52□□□□□ -1.21
PCDHA11-201ENST00000398640 ANK3Q12955 4377 aaKnown RBP7.5□□□□□ -1.21
PCDHA11-201ENST00000398640 RELNP78509 3460 aa7.49□□□□□ -1.21
PCDHA11-201ENST00000398640 ASPMQ8IZT6 3477 aa7.46□□□□□ -1.22
PCDHA11-201ENST00000398640 KRTAP13-3Q3SY46 172 aa7.45□□□□□ -1.22
PCDHA11-201ENST00000398640 OTOGQ6ZRI0 2925 aa7.45□□□□□ -1.22
PCDHA11-201ENST00000398640 DCHS1Q96JQ0 3298 aa7.43□□□□□ -1.22
PCDHA11-201ENST00000398640 PRO2289Q9P1D8 64 aa7.39□□□□□ -1.23
PCDHA11-201ENST00000398640 DMDP11532 3685 aa7.38□□□□□ -1.23
PCDHA11-201ENST00000398640 LAMA5O15230 3695 aa7.37□□□□□ -1.23
PCDHA11-201ENST00000398640 TENM1Q9UKZ4 2725 aa7.35□□□□□ -1.23
PCDHA11-201ENST00000398640 WDFY3Q8IZQ1 3526 aa7.34□□□□□ -1.23
PCDHA11-201ENST00000398640 PP632Q6XCG6 107 aa7.34□□□□□ -1.23
PCDHA11-201ENST00000398640 CELSR1Q9NYQ6 3014 aa7.33□□□□□ -1.24
PCDHA11-201ENST00000398640 H0YAA0 97 aa7.33□□□□□ -1.24
PCDHA11-201ENST00000398640 MUC3AQ02505 3323 aa7.26□□□□□ -1.25
PCDHA11-201ENST00000398640 TENM3Q9P273 2699 aa7.25□□□□□ -1.25
PCDHA11-201ENST00000398640 P0C880 135 aa7.25□□□□□ -1.25
PCDHA11-201ENST00000398640 ZFHX4Q86UP3 3567 aa7.25□□□□□ -1.25
PCDHA11-201ENST00000398640 FBN1P35555 2871 aaKnown RBP7.24□□□□□ -1.25
PCDHA11-201ENST00000398640 ZFHX3Q15911 3703 aa7.21□□□□□ -1.26
PCDHA11-201ENST00000398640 CSMD1Q96PZ7 3565 aa7.12□□□□□ -1.27
PCDHA11-201ENST00000398640 SMG1Q96Q15 3661 aaKnown RBP7.09□□□□□ -1.27
PCDHA11-201ENST00000398640 PKD1L1Q8TDX9 2849 aa7.09□□□□□ -1.27
PCDHA11-201ENST00000398640 ALMS1Q8TCU4 4167 aa7.08□□□□□ -1.28
PCDHA11-201ENST00000398640 BSNQ9UPA5 3926 aa7.07□□□□□ -1.28
PCDHA11-201ENST00000398640 VWFP04275 2813 aa7.06□□□□□ -1.28
PCDHA11-201ENST00000398640 KRTAP4-5Q9BYR2 181 aa7.02□□□□□ -1.29
PCDHA11-201ENST00000398640 KRTAP12-2P59991 146 aa7.01□□□□□ -1.29
PCDHA11-201ENST00000398640 HUWE1Q7Z6Z7 4374 aaKnown RBP6.99□□□□□ -1.29
PCDHA11-201ENST00000398640 MT1HL1P0DM35 61 aa6.98□□□□□ -1.29
PCDHA11-201ENST00000398640 SPENQ96T58 3664 aaKnown RBP6.97□□□□□ -1.29
PCDHA11-201ENST00000398640 CSMD2Q7Z408 3487 aa6.94□□□□□ -1.3
PCDHA11-201ENST00000398640 TGP01266 2768 aa6.92□□□□□ -1.3
PCDHA11-201ENST00000398640 FBN3Q75N90 2809 aa6.91□□□□□ -1.3
PCDHA11-201ENST00000398640 TRRAPQ9Y4A5 3859 aa6.86□□□□□ -1.31
PCDHA11-201ENST00000398640 AKAP9Q99996 3911 aa6.81□□□□□ -1.32
PCDHA11-201ENST00000398640 SVEP1Q4LDE5 3571 aa6.81□□□□□ -1.32
PCDHA11-201ENST00000398640 KRTAP10-4P60372 401 aaPredicted RBP6.8□□□□□ -1.32
PCDHA11-201ENST00000398640 KRTAP13-4Q3LI77 160 aa6.8□□□□□ -1.32
PCDHA11-201ENST00000398640 KRTAP12-1P59990 96 aa6.77□□□□□ -1.33
PCDHA11-201ENST00000398640 KRTAP3-1Q9BYR8 98 aa6.73□□□□□ -1.33
PCDHA11-201ENST00000398640 DNAH9Q9NYC9 4486 aa6.72□□□□□ -1.33
PCDHA11-201ENST00000398640 KRTAP15-1Q3LI76 137 aa6.71□□□□□ -1.34
PCDHA11-201ENST00000398640 CRCT1Q9UGL9 99 aa6.65□□□□□ -1.34
PCDHA11-201ENST00000398640 DNAH1Q9P2D7 4330 aa6.53□□□□□ -1.36
PCDHA11-201ENST00000398640 CUBNO60494 3623 aa6.51□□□□□ -1.37
PCDHA11-201ENST00000398640 MEGF8Q7Z7M0 2845 aa6.51□□□□□ -1.37
PCDHA11-201ENST00000398640 COL7A1Q02388 2944 aa6.5□□□□□ -1.37
PCDHA11-201ENST00000398640 KRTAP10-6P60371 365 aaPredicted RBP6.49□□□□□ -1.37
PCDHA11-201ENST00000398640 ZNF469Q96JG9 3925 aaPredicted RBP6.49□□□□□ -1.37
PCDHA11-201ENST00000398640 VPS13CQ709C8 3753 aa6.48□□□□□ -1.37
PCDHA11-201ENST00000398640 SRRM2Q9UQ35 2752 aaKnown RBP6.46□□□□□ -1.37
PCDHA11-201ENST00000398640 DNAH11Q96DT5 4516 aa6.39□□□□□ -1.39
PCDHA11-201ENST00000398640 KRTAP10-12P60413 245 aa6.39□□□□□ -1.39
PCDHA11-201ENST00000398640 DNHD1Q96M86 4753 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms