RNA–Protein interactions for RNA: ENST00000398594.3

PCDHGB7-201, Transcript of protocadherin gamma subfamily B, 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB7, Length 4,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB7-201ENST00000398594 Q5W150 140 aa8.48□□□□□ -1.05
PCDHGB7-201ENST00000398594 Q5XG85 94 aa8.48□□□□□ -1.05
PCDHGB7-201ENST00000398594 LINC00483Q53H64 154 aa8.48□□□□□ -1.05
PCDHGB7-201ENST00000398594 CSAG1Q6PB30 78 aa8.48□□□□□ -1.05
PCDHGB7-201ENST00000398594 Q1T7F1 81 aa8.47□□□□□ -1.05
PCDHGB7-201ENST00000398594 CDC42SE1Q9NRR8 79 aa8.46□□□□□ -1.05
PCDHGB7-201ENST00000398594 KRTAP11-1Q8IUC1 163 aa8.46□□□□□ -1.06
PCDHGB7-201ENST00000398594 ZFHX4Q86UP3 3567 aa8.42□□□□□ -1.06
PCDHGB7-201ENST00000398594 CAMK2N1Q7Z7J9 78 aa8.42□□□□□ -1.06
PCDHGB7-201ENST00000398594 RELNP78509 3460 aa8.41□□□□□ -1.06
PCDHGB7-201ENST00000398594 LAMA5O15230 3695 aa8.41□□□□□ -1.06
PCDHGB7-201ENST00000398594 CELSR1Q9NYQ6 3014 aa8.41□□□□□ -1.06
PCDHGB7-201ENST00000398594 VWFP04275 2813 aa8.41□□□□□ -1.06
PCDHGB7-201ENST00000398594 A0A1B0GU33 70 aa8.4□□□□□ -1.07
PCDHGB7-201ENST00000398594 S4R3F8 94 aa8.38□□□□□ -1.07
PCDHGB7-201ENST00000398594 FP248Q71RG6 208 aaPredicted RBP8.38□□□□□ -1.07
PCDHGB7-201ENST00000398594 KRTAP7-1Q8IUC3 87 aa8.37□□□□□ -1.07
PCDHGB7-201ENST00000398594 CYSTM1Q9H1C7 97 aa8.37□□□□□ -1.07
PCDHGB7-201ENST00000398594 FBN1P35555 2871 aaKnown RBP8.33□□□□□ -1.08
PCDHGB7-201ENST00000398594 OXTP01178 125 aa8.32□□□□□ -1.08
PCDHGB7-201ENST00000398594 SRRM2Q9UQ35 2752 aaKnown RBP8.3□□□□□ -1.08
PCDHGB7-201ENST00000398594 Q75L30 129 aa8.29□□□□□ -1.08
PCDHGB7-201ENST00000398594 R4GN34 69 aa8.29□□□□□ -1.08
PCDHGB7-201ENST00000398594 NOTCH2NLQ7Z3S9 236 aa8.29□□□□□ -1.08
PCDHGB7-201ENST00000398594 PDZD2O15018 2839 aa8.27□□□□□ -1.09
PCDHGB7-201ENST00000398594 TGP01266 2768 aa8.27□□□□□ -1.09
PCDHGB7-201ENST00000398594 KRTAP13-2Q52LG2 175 aa8.25□□□□□ -1.09
PCDHGB7-201ENST00000398594 SMG1Q96Q15 3661 aaKnown RBP8.23□□□□□ -1.09
PCDHGB7-201ENST00000398594 KRTAP29-1A8MX34 341 aaPredicted RBP8.22□□□□□ -1.09
PCDHGB7-201ENST00000398594 H3BS24 57 aa8.21□□□□□ -1.1
PCDHGB7-201ENST00000398594 LINC01558Q9Y6Z2 57 aa8.2□□□□□ -1.1
PCDHGB7-201ENST00000398594 KRTAP13-1Q8IUC0 172 aa8.2□□□□□ -1.1
PCDHGB7-201ENST00000398594 OTOGQ6ZRI0 2925 aa8.18□□□□□ -1.1
PCDHGB7-201ENST00000398594 DMAC1Q96GE9 116 aa8.18□□□□□ -1.1
PCDHGB7-201ENST00000398594 Q5VV11 94 aa8.17□□□□□ -1.1
PCDHGB7-201ENST00000398594 ASB16-AS1Q495Z4 193 aa8.14□□□□□ -1.11
PCDHGB7-201ENST00000398594 SPENQ96T58 3664 aaKnown RBP8.14□□□□□ -1.11
PCDHGB7-201ENST00000398594 RPS29P62273 56 aaKnown RBP8.14□□□□□ -1.11
PCDHGB7-201ENST00000398594 M0QZ58 72 aa8.12□□□□□ -1.11
PCDHGB7-201ENST00000398594 PRAC1Q96KF2 57 aa8.11□□□□□ -1.11
PCDHGB7-201ENST00000398594 ZFHX3Q15911 3703 aa8.1□□□□□ -1.11
PCDHGB7-201ENST00000398594 LUZP6Q538Z0 58 aa8.04□□□□□ -1.12
PCDHGB7-201ENST00000398594 ADM2Q7Z4H4 148 aa8.03□□□□□ -1.12
PCDHGB7-201ENST00000398594 CSMD1Q96PZ7 3565 aa8.03□□□□□ -1.12
PCDHGB7-201ENST00000398594 RPL37P61927 97 aaKnown RBP8.01□□□□□ -1.13
PCDHGB7-201ENST00000398594 H1FX-AS1Q4G0G2 97 aa8□□□□□ -1.13
PCDHGB7-201ENST00000398594 SVEP1Q4LDE5 3571 aa7.97□□□□□ -1.13
PCDHGB7-201ENST00000398594 SPATA8Q6RVD6 105 aa7.96□□□□□ -1.14
PCDHGB7-201ENST00000398594 KRTAP1-4P0C5Y4 121 aa7.92□□□□□ -1.14
PCDHGB7-201ENST00000398594 C20orf166-AS1Q96NR2 134 aa7.92□□□□□ -1.14
PCDHGB7-201ENST00000398594 PLAC4Q8WY50 150 aa7.92□□□□□ -1.14
PCDHGB7-201ENST00000398594 BSNQ9UPA5 3926 aa7.91□□□□□ -1.14
PCDHGB7-201ENST00000398594 NBPF19A0A087WUL8 3843 aa7.91□□□□□ -1.14
PCDHGB7-201ENST00000398594 A8MUU9 505 aa7.85□□□□□ -1.15
PCDHGB7-201ENST00000398594 ROMO1P60602 79 aa7.79□□□□□ -1.16
PCDHGB7-201ENST00000398594 A6NN06 94 aa7.77□□□□□ -1.17
PCDHGB7-201ENST00000398594 XP32Q5T750 250 aa7.77□□□□□ -1.17
PCDHGB7-201ENST00000398594 A0A0A0MQY5 61 aa7.75□□□□□ -1.17
PCDHGB7-201ENST00000398594 A8MU10 97 aa7.74□□□□□ -1.17
PCDHGB7-201ENST00000398594 CSMD2Q7Z408 3487 aa7.73□□□□□ -1.17
PCDHGB7-201ENST00000398594 FBN3Q75N90 2809 aa7.71□□□□□ -1.18
PCDHGB7-201ENST00000398594 COL7A1Q02388 2944 aa7.68□□□□□ -1.18
PCDHGB7-201ENST00000398594 CUBNO60494 3623 aa7.66□□□□□ -1.18
PCDHGB7-201ENST00000398594 TPRXLQ17RH7 258 aa7.65□□□□□ -1.19
PCDHGB7-201ENST00000398594 A0A1B0GVY2 172 aa7.64□□□□□ -1.19
PCDHGB7-201ENST00000398594 VPS13CQ709C8 3753 aa7.58□□□□□ -1.2
PCDHGB7-201ENST00000398594 KRTAP16-1A8MUX0 517 aa7.56□□□□□ -1.2
PCDHGB7-201ENST00000398594 KRTAP13-3Q3SY46 172 aa7.55□□□□□ -1.2
PCDHGB7-201ENST00000398594 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
PCDHGB7-201ENST00000398594 KRTAP10-8P60410 259 aa7.54□□□□□ -1.2
PCDHGB7-201ENST00000398594 MEGF8Q7Z7M0 2845 aa7.49□□□□□ -1.21
PCDHGB7-201ENST00000398594 TRRAPQ9Y4A5 3859 aa7.44□□□□□ -1.22
PCDHGB7-201ENST00000398594 KRTAP10-10P60014 251 aa7.44□□□□□ -1.22
PCDHGB7-201ENST00000398594 TNP1P09430 55 aa7.43□□□□□ -1.22
PCDHGB7-201ENST00000398594 NDUFAF8A1L188 74 aa7.37□□□□□ -1.23
PCDHGB7-201ENST00000398594 ANK3Q12955 4377 aaKnown RBP7.29□□□□□ -1.24
PCDHGB7-201ENST00000398594 P0C880 135 aa7.28□□□□□ -1.24
PCDHGB7-201ENST00000398594 ZNF469Q96JG9 3925 aaPredicted RBP7.22□□□□□ -1.25
PCDHGB7-201ENST00000398594 H0YAA0 97 aa7.21□□□□□ -1.26
PCDHGB7-201ENST00000398594 C10orf95Q9H7T3 257 aa7.15□□□□□ -1.27
PCDHGB7-201ENST00000398594 PRO2289Q9P1D8 64 aa7.12□□□□□ -1.27
PCDHGB7-201ENST00000398594 PP632Q6XCG6 107 aa7.07□□□□□ -1.28
PCDHGB7-201ENST00000398594 MT1HL1P0DM35 61 aa7.03□□□□□ -1.28
PCDHGB7-201ENST00000398594 AKAP9Q99996 3911 aa7.02□□□□□ -1.29
PCDHGB7-201ENST00000398594 KRTAP4-5Q9BYR2 181 aa6.99□□□□□ -1.29
PCDHGB7-201ENST00000398594 KRTAP3-1Q9BYR8 98 aa6.95□□□□□ -1.3
PCDHGB7-201ENST00000398594 KRTAP10-4P60372 401 aaPredicted RBP6.85□□□□□ -1.31
PCDHGB7-201ENST00000398594 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
PCDHGB7-201ENST00000398594 DNHD1Q96M86 4753 aa6.81□□□□□ -1.32
PCDHGB7-201ENST00000398594 HUWE1Q7Z6Z7 4374 aaKnown RBP6.76□□□□□ -1.33
PCDHGB7-201ENST00000398594 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
PCDHGB7-201ENST00000398594 CSMD3Q7Z407 3707 aa6.7□□□□□ -1.34
PCDHGB7-201ENST00000398594 KRTAP13-4Q3LI77 160 aa6.68□□□□□ -1.34
PCDHGB7-201ENST00000398594 KRTAP10-6P60371 365 aaPredicted RBP6.67□□□□□ -1.34
PCDHGB7-201ENST00000398594 DNAH5Q8TE73 4624 aa6.57□□□□□ -1.36
PCDHGB7-201ENST00000398594 DNAH9Q9NYC9 4486 aa6.54□□□□□ -1.36
PCDHGB7-201ENST00000398594 PLECQ15149 4684 aaKnown RBP6.51□□□□□ -1.37
PCDHGB7-201ENST00000398594 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
PCDHGB7-201ENST00000398594 KRTAP3-2Q9BYR7 98 aa6.46□□□□□ -1.38
PCDHGB7-201ENST00000398594 ANK2Q01484 3957 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms