RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 IGHV6-1A0A0B4J1U7 121 aa8.62□□□□□ -1.03
APTR-201ENST00000398043 A0A1B0GVX0 72 aa8.62□□□□□ -1.03
APTR-201ENST00000398043 A0A1W2PPM0 123 aa8.62□□□□□ -1.03
APTR-201ENST00000398043 C14orf132Q9NPU4 83 aa8.62□□□□□ -1.03
APTR-201ENST00000398043 PDE6GP18545 87 aa8.61□□□□□ -1.03
APTR-201ENST00000398043 FLGP20930 4061 aaPredicted RBP8.61□□□□□ -1.03
APTR-201ENST00000398043 J3KT08 172 aa8.6□□□□□ -1.03
APTR-201ENST00000398043 C8orf87E5RJ46 101 aa8.58□□□□□ -1.04
APTR-201ENST00000398043 H3BT86 120 aa8.57□□□□□ -1.04
APTR-201ENST00000398043 COX6B2Q6YFQ2 88 aa8.57□□□□□ -1.04
APTR-201ENST00000398043 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
APTR-201ENST00000398043 KRTAP10-6P60371 365 aaPredicted RBP8.54□□□□□ -1.04
APTR-201ENST00000398043 MTURNQ8N3F0 131 aa8.54□□□□□ -1.04
APTR-201ENST00000398043 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
APTR-201ENST00000398043 A8MWP4 228 aa8.51□□□□□ -1.05
APTR-201ENST00000398043 IGKV3D-7A0A0C4DH55 119 aa8.5□□□□□ -1.05
APTR-201ENST00000398043 NDUFB1O75438 58 aa8.48□□□□□ -1.05
APTR-201ENST00000398043 SMCPP49901 116 aaPredicted RBP8.48□□□□□ -1.05
APTR-201ENST00000398043 Q8N9P0 234 aaPredicted RBP8.48□□□□□ -1.05
APTR-201ENST00000398043 SPCS1Q9Y6A9 102 aa8.48□□□□□ -1.05
APTR-201ENST00000398043 MPLKIPQ8TAP9 179 aa8.47□□□□□ -1.05
APTR-201ENST00000398043 C8orf17Q9NRJ1 99 aa8.47□□□□□ -1.05
APTR-201ENST00000398043 NREPQ16612 68 aa8.46□□□□□ -1.06
APTR-201ENST00000398043 COL5A1-AS1Q5SY13 56 aa8.46□□□□□ -1.06
APTR-201ENST00000398043 M0R2T5 61 aa8.45□□□□□ -1.06
APTR-201ENST00000398043 HRES1P13985 223 aa8.45□□□□□ -1.06
APTR-201ENST00000398043 PRR15Q8IV56 129 aa8.44□□□□□ -1.06
APTR-201ENST00000398043 ZCCHC13Q8WW36 166 aaKnown RBP8.44□□□□□ -1.06
APTR-201ENST00000398043 PRO0461Q9UI25 63 aa8.43□□□□□ -1.06
APTR-201ENST00000398043 MMP24-AS1A0A0U1RRL7 71 aa8.39□□□□□ -1.07
APTR-201ENST00000398043 Q6ZVQ6 151 aa8.39□□□□□ -1.07
APTR-201ENST00000398043 K7EP34 96 aa8.38□□□□□ -1.07
APTR-201ENST00000398043 K7EQZ3 153 aa8.37□□□□□ -1.07
APTR-201ENST00000398043 KRTAP9-6A0A140TA67 174 aa8.35□□□□□ -1.07
APTR-201ENST00000398043 TMEM254Q8TBM7 123 aa8.35□□□□□ -1.07
APTR-201ENST00000398043 SPINK7P58062 85 aa8.34□□□□□ -1.07
APTR-201ENST00000398043 MRPL34Q9BQ48 92 aaKnown RBP8.33□□□□□ -1.08
APTR-201ENST00000398043 RBM12B-AS1Q9P1G2 102 aa8.33□□□□□ -1.08
APTR-201ENST00000398043 BPY2O14599 106 aa8.32□□□□□ -1.08
APTR-201ENST00000398043 KRTAP9-8Q9BYQ0 159 aa8.31□□□□□ -1.08
APTR-201ENST00000398043 hDV103S1A0JD37 113 aa8.3□□□□□ -1.08
APTR-201ENST00000398043 FAM236DA0A1B0GTK5 79 aa8.29□□□□□ -1.08
APTR-201ENST00000398043 PCP4L1A6NKN8 68 aa8.29□□□□□ -1.08
APTR-201ENST00000398043 FAM236CP0DP71 79 aa8.29□□□□□ -1.08
APTR-201ENST00000398043 LINC00846Q9NV44 126 aa8.28□□□□□ -1.08
APTR-201ENST00000398043 Q8N9L7 120 aa8.26□□□□□ -1.09
APTR-201ENST00000398043 FSIP2Q5CZC0 6907 aa8.25□□□□□ -1.09
APTR-201ENST00000398043 GTF2H5Q6ZYL4 71 aa8.25□□□□□ -1.09
APTR-201ENST00000398043 CRCT1Q9UGL9 99 aa8.23□□□□□ -1.09
APTR-201ENST00000398043 F8W1H4 67 aa8.22□□□□□ -1.09
APTR-201ENST00000398043 Q5W150 140 aa8.2□□□□□ -1.1
APTR-201ENST00000398043 UBL5Q9BZL1 73 aa8.2□□□□□ -1.1
APTR-201ENST00000398043 CASC2Q6XLA1 102 aa8.19□□□□□ -1.1
APTR-201ENST00000398043 WFDC13Q8IUB5 93 aa8.19□□□□□ -1.1
APTR-201ENST00000398043 NDUFS5O43920 106 aa8.18□□□□□ -1.1
APTR-201ENST00000398043 MT2AP02795 61 aa8.18□□□□□ -1.1
APTR-201ENST00000398043 ETDBQ3ZM63 59 aa8.18□□□□□ -1.1
APTR-201ENST00000398043 HCG22E2RYF7 251 aa8.13□□□□□ -1.11
APTR-201ENST00000398043 MT1FP04733 61 aa8.12□□□□□ -1.11
APTR-201ENST00000398043 IGKV2D-30A0A075B6S6 120 aa8.08□□□□□ -1.12
APTR-201ENST00000398043 IGKV2-30P06310 120 aa8.08□□□□□ -1.12
APTR-201ENST00000398043 CXCL6P80162 114 aa8.08□□□□□ -1.12
APTR-201ENST00000398043 C7orf65Q6ZTY9 151 aa8.08□□□□□ -1.12
APTR-201ENST00000398043 KRTAP9-3Q9BYQ3 159 aa8.04□□□□□ -1.12
APTR-201ENST00000398043 H1FX-AS1Q4G0G2 97 aa8.03□□□□□ -1.12
APTR-201ENST00000398043 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
APTR-201ENST00000398043 LCE2BO14633 110 aa7.98□□□□□ -1.13
APTR-201ENST00000398043 ACYP1P07311 99 aa7.98□□□□□ -1.13
APTR-201ENST00000398043 FAM240AA0A1B0GVK7 77 aa7.97□□□□□ -1.13
APTR-201ENST00000398043 C4orf26Q17RF5 130 aa7.96□□□□□ -1.14
APTR-201ENST00000398043 TP53AIP1Q9HCN2 124 aa7.95□□□□□ -1.14
APTR-201ENST00000398043 USH2AO75445 5202 aa7.95□□□□□ -1.14
APTR-201ENST00000398043 KRTAP3-1Q9BYR8 98 aa7.92□□□□□ -1.14
APTR-201ENST00000398043 A0A1B0GV90 55 aa7.89□□□□□ -1.15
APTR-201ENST00000398043 ATP5EP2Q5VTU8 51 aa7.89□□□□□ -1.15
APTR-201ENST00000398043 SSPOA2VEC9 5147 aa7.88□□□□□ -1.15
APTR-201ENST00000398043 C1orf64Q8NEQ6 169 aa7.82□□□□□ -1.16
APTR-201ENST00000398043 CYP4F30PQ9H0H9 118 aa7.82□□□□□ -1.16
APTR-201ENST00000398043 TRAV22A0A0B4J277 110 aa7.79□□□□□ -1.16
APTR-201ENST00000398043 HIST1H4AP62805 103 aaKnown RBP7.79□□□□□ -1.16
APTR-201ENST00000398043 LINC00643Q86TS7 51 aa7.79□□□□□ -1.16
APTR-201ENST00000398043 KRTAP19-1Q8IUB9 90 aa7.77□□□□□ -1.17
APTR-201ENST00000398043 A0A087WVE0 104 aa7.75□□□□□ -1.17
APTR-201ENST00000398043 S4R3F8 94 aa7.75□□□□□ -1.17
APTR-201ENST00000398043 LOC101927531A0A1B0GV80 90 aa7.74□□□□□ -1.17
APTR-201ENST00000398043 UQCRQO14949 82 aa7.74□□□□□ -1.17
APTR-201ENST00000398043 C5orf47Q569G3 176 aa7.74□□□□□ -1.17
APTR-201ENST00000398043 LCA10Q71F78 164 aa7.74□□□□□ -1.17
APTR-201ENST00000398043 KRTAP3-3Q9BYR6 98 aa7.7□□□□□ -1.18
APTR-201ENST00000398043 FCGBPQ9Y6R7 5405 aaPredicted RBP7.68□□□□□ -1.18
APTR-201ENST00000398043 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.68□□□□□ -1.18
APTR-201ENST00000398043 H0Y9P7 68 aa7.68□□□□□ -1.18
APTR-201ENST00000398043 KRTAP19-6Q3LI70 58 aa7.68□□□□□ -1.18
APTR-201ENST00000398043 CSAG1Q6PB30 78 aa7.68□□□□□ -1.18
APTR-201ENST00000398043 ATOX1O00244 68 aa7.67□□□□□ -1.18
APTR-201ENST00000398043 OCR1Q9BZK8 76 aa7.65□□□□□ -1.18
APTR-201ENST00000398043 J3QR89 54 aa7.6□□□□□ -1.19
APTR-201ENST00000398043 KLKP1Q107X0 134 aa7.57□□□□□ -1.2
APTR-201ENST00000398043 LINC00208Q96KT6 92 aa7.57□□□□□ -1.2
APTR-201ENST00000398043 FAM236AA0A1B0GUQ0 79 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms