RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 A0A1B0GW54 56 aa13.74□□□□□ -0.21
TMEM55B-202ENST00000398020 SEC61BP60468 96 aaKnown RBP13.72□□□□□ -0.21
TMEM55B-202ENST00000398020 LINC00643Q86TS7 51 aa13.72□□□□□ -0.21
TMEM55B-202ENST00000398020 DSCR10P59022 87 aa13.68□□□□□ -0.22
TMEM55B-202ENST00000398020 RPL37P61927 97 aaKnown RBP13.64□□□□□ -0.23
TMEM55B-202ENST00000398020 NREPQ16612 68 aa13.64□□□□□ -0.23
TMEM55B-202ENST00000398020 IGHV6-1A0A0B4J1U7 121 aa13.63□□□□□ -0.23
TMEM55B-202ENST00000398020 PCOTHQ58A44 107 aa13.63□□□□□ -0.23
TMEM55B-202ENST00000398020 J3KT08 172 aa13.62□□□□□ -0.23
TMEM55B-202ENST00000398020 SCGB1A1P11684 91 aa13.61□□□□□ -0.23
TMEM55B-202ENST00000398020 NOTCH2NLQ7Z3S9 236 aa13.61□□□□□ -0.23
TMEM55B-202ENST00000398020 UBL5Q9BZL1 73 aa13.61□□□□□ -0.23
TMEM55B-202ENST00000398020 LINC00313P59037 77 aa13.6□□□□□ -0.23
TMEM55B-202ENST00000398020 A0A1B0GVX0 72 aa13.59□□□□□ -0.23
TMEM55B-202ENST00000398020 KRTAP4-1Q9BYQ7 146 aa13.59□□□□□ -0.23
TMEM55B-202ENST00000398020 IMUPQ9GZP8 106 aa13.56□□□□□ -0.24
TMEM55B-202ENST00000398020 Q6ZVQ6 151 aa13.55□□□□□ -0.24
TMEM55B-202ENST00000398020 Q75L30 129 aa13.54□□□□□ -0.24
TMEM55B-202ENST00000398020 ATP5EP2Q5VTU8 51 aa13.52□□□□□ -0.25
TMEM55B-202ENST00000398020 IGKV3D-7A0A0C4DH55 119 aa13.51□□□□□ -0.25
TMEM55B-202ENST00000398020 KRTAP16-1A8MUX0 517 aa13.51□□□□□ -0.25
TMEM55B-202ENST00000398020 A8MWP4 228 aa13.51□□□□□ -0.25
TMEM55B-202ENST00000398020 NDUFB1O75438 58 aa13.51□□□□□ -0.25
TMEM55B-202ENST00000398020 C20orf166-AS1Q96NR2 134 aa13.5□□□□□ -0.25
TMEM55B-202ENST00000398020 A8MUU9 505 aa13.49□□□□□ -0.25
TMEM55B-202ENST00000398020 C8orf87E5RJ46 101 aa13.48□□□□□ -0.25
TMEM55B-202ENST00000398020 PCP4P48539 62 aa13.47□□□□□ -0.25
TMEM55B-202ENST00000398020 ATP11AUNQ6ZP68 121 aa13.46□□□□□ -0.26
TMEM55B-202ENST00000398020 BPY2O14599 106 aa13.44□□□□□ -0.26
TMEM55B-202ENST00000398020 PRR15Q8IV56 129 aa13.42□□□□□ -0.26
TMEM55B-202ENST00000398020 CXCL6P80162 114 aa13.41□□□□□ -0.26
TMEM55B-202ENST00000398020 K7EQZ3 153 aa13.4□□□□□ -0.26
TMEM55B-202ENST00000398020 C8orf17Q9NRJ1 99 aa13.4□□□□□ -0.26
TMEM55B-202ENST00000398020 A0A0U1RQV1 116 aa13.35□□□□□ -0.27
TMEM55B-202ENST00000398020 Q8N9L7 120 aa13.34□□□□□ -0.27
TMEM55B-202ENST00000398020 FAT4Q6V0I7 4981 aa13.34□□□□□ -0.27
TMEM55B-202ENST00000398020 HIST1H4AP62805 103 aaKnown RBP13.34□□□□□ -0.27
TMEM55B-202ENST00000398020 A0A087WVE0 104 aa13.32□□□□□ -0.28
TMEM55B-202ENST00000398020 FAM236AA0A1B0GUQ0 79 aa13.32□□□□□ -0.28
TMEM55B-202ENST00000398020 FAM236BA0A1B0GV22 79 aa13.32□□□□□ -0.28
TMEM55B-202ENST00000398020 MMP24-AS1A0A0U1RRL7 71 aa13.31□□□□□ -0.28
TMEM55B-202ENST00000398020 Q8N9P0 234 aaPredicted RBP13.25□□□□□ -0.29
TMEM55B-202ENST00000398020 hDV103S1A0JD37 113 aa13.22□□□□□ -0.29
TMEM55B-202ENST00000398020 ANAPC13Q9BS18 74 aa13.22□□□□□ -0.29
TMEM55B-202ENST00000398020 TMEM254Q8TBM7 123 aa13.21□□□□□ -0.3
TMEM55B-202ENST00000398020 MRPL34Q9BQ48 92 aaKnown RBP13.2□□□□□ -0.3
TMEM55B-202ENST00000398020 WFDC13Q8IUB5 93 aa13.18□□□□□ -0.3
TMEM55B-202ENST00000398020 ZCCHC13Q8WW36 166 aaKnown RBP13.16□□□□□ -0.3
TMEM55B-202ENST00000398020 ATOX1O00244 68 aa13.15□□□□□ -0.3
TMEM55B-202ENST00000398020 KRTAP19-2Q3LHN2 52 aa13.15□□□□□ -0.31
TMEM55B-202ENST00000398020 CASC2Q6XLA1 102 aa13.14□□□□□ -0.31
TMEM55B-202ENST00000398020 NDUFS5O43920 106 aa13.12□□□□□ -0.31
TMEM55B-202ENST00000398020 LCE2CQ5TA81 110 aa13.1□□□□□ -0.31
TMEM55B-202ENST00000398020 HCG22E2RYF7 251 aa13.07□□□□□ -0.32
TMEM55B-202ENST00000398020 LCE2AQ5TA79 106 aaPredicted RBP13.06□□□□□ -0.32
TMEM55B-202ENST00000398020 COX6B2Q6YFQ2 88 aa13.02□□□□□ -0.33
TMEM55B-202ENST00000398020 SERP2Q8N6R1 65 aa12.99□□□□□ -0.33
TMEM55B-202ENST00000398020 COX7CP15954 63 aa12.97□□□□□ -0.33
TMEM55B-202ENST00000398020 CCDC179H3BU77 68 aa12.96□□□□□ -0.33
TMEM55B-202ENST00000398020 SPINK7P58062 85 aa12.96□□□□□ -0.33
TMEM55B-202ENST00000398020 SMIM20Q8N5G0 67 aa12.96□□□□□ -0.34
TMEM55B-202ENST00000398020 UQCRQO14949 82 aa12.94□□□□□ -0.34
TMEM55B-202ENST00000398020 HRES1P13985 223 aa12.93□□□□□ -0.34
TMEM55B-202ENST00000398020 Q5W150 140 aa12.93□□□□□ -0.34
TMEM55B-202ENST00000398020 TRAV7A0A075B6U4 112 aa12.92□□□□□ -0.34
TMEM55B-202ENST00000398020 MT1HP80294 61 aa12.9□□□□□ -0.34
TMEM55B-202ENST00000398020 OCR1Q9BZK8 76 aa12.86□□□□□ -0.35
TMEM55B-202ENST00000398020 MPLKIPQ8TAP9 179 aa12.85□□□□□ -0.35
TMEM55B-202ENST00000398020 RBM12B-AS1Q9P1G2 102 aa12.82□□□□□ -0.36
TMEM55B-202ENST00000398020 FLGP20930 4061 aaPredicted RBP12.81□□□□□ -0.36
TMEM55B-202ENST00000398020 IGKV2D-30A0A075B6S6 120 aa12.8□□□□□ -0.36
TMEM55B-202ENST00000398020 FAM236DA0A1B0GTK5 79 aa12.8□□□□□ -0.36
TMEM55B-202ENST00000398020 IGKV2-30P06310 120 aa12.8□□□□□ -0.36
TMEM55B-202ENST00000398020 FAM236CP0DP71 79 aa12.8□□□□□ -0.36
TMEM55B-202ENST00000398020 TP53AIP1Q9HCN2 124 aa12.76□□□□□ -0.37
TMEM55B-202ENST00000398020 M0R2T5 61 aa12.73□□□□□ -0.37
TMEM55B-202ENST00000398020 C7orf65Q6ZTY9 151 aa12.73□□□□□ -0.37
TMEM55B-202ENST00000398020 C20orf197Q8N268 126 aa12.71□□□□□ -0.37
TMEM55B-202ENST00000398020 CYSTM1Q9H1C7 97 aa12.67□□□□□ -0.38
TMEM55B-202ENST00000398020 KLKP1Q107X0 134 aa12.65□□□□□ -0.38
TMEM55B-202ENST00000398020 C5orf47Q569G3 176 aa12.61□□□□□ -0.39
TMEM55B-202ENST00000398020 SNURFQ9Y675 71 aa12.61□□□□□ -0.39
TMEM55B-202ENST00000398020 TRAV22A0A0B4J277 110 aa12.57□□□□□ -0.4
TMEM55B-202ENST00000398020 KRTAP10-6P60371 365 aaPredicted RBP12.57□□□□□ -0.4
TMEM55B-202ENST00000398020 LORP23490 312 aaPredicted RBP12.53□□□□□ -0.4
TMEM55B-202ENST00000398020 C4orf26Q17RF5 130 aa12.53□□□□□ -0.4
TMEM55B-202ENST00000398020 H7BZZ5 65 aa12.5□□□□□ -0.41
TMEM55B-202ENST00000398020 MP68P56378 58 aa12.5□□□□□ -0.41
TMEM55B-202ENST00000398020 H0Y9P7 68 aa12.49□□□□□ -0.41
TMEM55B-202ENST00000398020 NDUFC1O43677 76 aa12.49□□□□□ -0.41
TMEM55B-202ENST00000398020 TMEM258P61165 79 aa12.47□□□□□ -0.41
TMEM55B-202ENST00000398020 H3BPC8 53 aa12.46□□□□□ -0.41
TMEM55B-202ENST00000398020 CYP4F30PQ9H0H9 118 aa12.45□□□□□ -0.42
TMEM55B-202ENST00000398020 LOC101927531A0A1B0GV80 90 aa12.43□□□□□ -0.42
TMEM55B-202ENST00000398020 LINC00208Q96KT6 92 aa12.43□□□□□ -0.42
TMEM55B-202ENST00000398020 H1FX-AS1Q4G0G2 97 aa12.42□□□□□ -0.42
TMEM55B-202ENST00000398020 C1orf64Q8NEQ6 169 aa12.38□□□□□ -0.43
TMEM55B-202ENST00000398020 KRTAP3-1Q9BYR8 98 aa12.34□□□□□ -0.43
TMEM55B-202ENST00000398020 KRTAP9-2Q9BYQ4 174 aa12.29□□□□□ -0.44
TMEM55B-202ENST00000398020 KRTAP9-8Q9BYQ0 159 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms