RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 SPTA1P02549 2419 aa0.19□□□□□ -2.38
HMGN2P39-201ENST00000398005 HUWE1Q7Z6Z7 4374 aaKnown RBP0.19□□□□□ -2.38
HMGN2P39-201ENST00000398005 NCOR2Q9Y618 2525 aa0.19□□□□□ -2.38
HMGN2P39-201ENST00000398005 PRRC2CQ9Y520 2896 aaKnown RBP0.19□□□□□ -2.38
HMGN2P39-201ENST00000398005 SPRR2AP35326 72 aa0.19□□□□□ -2.38
HMGN2P39-201ENST00000398005 KRTAP6-2Q3LI66 62 aa0.19□□□□□ -2.38
HMGN2P39-201ENST00000398005 KMT2AQ03164 3969 aa0.18□□□□□ -2.38
HMGN2P39-201ENST00000398005 CHD8Q9HCK8 2581 aa0.18□□□□□ -2.38
HMGN2P39-201ENST00000398005 LPAP08519 4548 aa0.18□□□□□ -2.38
HMGN2P39-201ENST00000398005 ACANP16112 2415 aa0.17□□□□□ -2.38
HMGN2P39-201ENST00000398005 NAV2Q8IVL1 2488 aa0.17□□□□□ -2.38
HMGN2P39-201ENST00000398005 HIVEP3Q5T1R4 2406 aa0.17□□□□□ -2.38
HMGN2P39-201ENST00000398005 USP24Q9UPU5 2620 aa0.17□□□□□ -2.38
HMGN2P39-201ENST00000398005 MYCBP2O75592 4640 aa0.16□□□□□ -2.38
HMGN2P39-201ENST00000398005 CLPSL2Q6UWE3 100 aa0.16□□□□□ -2.38
HMGN2P39-201ENST00000398005 VPS13BQ7Z7G8 4022 aa0.16□□□□□ -2.38
HMGN2P39-201ENST00000398005 SYNE2Q8WXH0 6885 aaKnown RBP0.16□□□□□ -2.38
HMGN2P39-201ENST00000398005 CACNA1AO00555 2505 aa0.16□□□□□ -2.38
HMGN2P39-201ENST00000398005 HECTD1Q9ULT8 2610 aa0.16□□□□□ -2.38
HMGN2P39-201ENST00000398005 FAT4Q6V0I7 4981 aa0.15□□□□□ -2.38
HMGN2P39-201ENST00000398005 MT1AP04731 61 aa0.15□□□□□ -2.39
HMGN2P39-201ENST00000398005 SPART-AS1P0CW21 52 aa0.15□□□□□ -2.39
HMGN2P39-201ENST00000398005 SNRPGP62308 76 aaKnown RBP0.15□□□□□ -2.39
HMGN2P39-201ENST00000398005 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
HMGN2P39-201ENST00000398005 DSTQ03001 7570 aaKnown RBP0.15□□□□□ -2.39
HMGN2P39-201ENST00000398005 HSPG2P98160 4391 aa0.15□□□□□ -2.39
HMGN2P39-201ENST00000398005 SPTBN4Q9H254 2564 aa0.14□□□□□ -2.39
HMGN2P39-201ENST00000398005 SETXQ7Z333 2677 aaKnown RBP0.14□□□□□ -2.39
HMGN2P39-201ENST00000398005 APC2O95996 2303 aa0.14□□□□□ -2.39
HMGN2P39-201ENST00000398005 SPRR2EP22531 72 aa0.14□□□□□ -2.39
HMGN2P39-201ENST00000398005 RPL39P62891 51 aaKnown RBP0.14□□□□□ -2.39
HMGN2P39-201ENST00000398005 NSD1Q96L73 2696 aaPredicted RBP0.14□□□□□ -2.39
HMGN2P39-201ENST00000398005 COL7A1Q02388 2944 aa0.14□□□□□ -2.39
HMGN2P39-201ENST00000398005 HECTD4Q9Y4D8 3996 aa0.13□□□□□ -2.39
HMGN2P39-201ENST00000398005 PKD1L2Q7Z442 2459 aa0.13□□□□□ -2.39
HMGN2P39-201ENST00000398005 CUBNO60494 3623 aa0.13□□□□□ -2.39
HMGN2P39-201ENST00000398005 TOMM7Q9P0U1 55 aa0.13□□□□□ -2.39
HMGN2P39-201ENST00000398005 WNK1Q9H4A3 2382 aa0.13□□□□□ -2.39
HMGN2P39-201ENST00000398005 FLNBO75369 2602 aaKnown RBP0.13□□□□□ -2.39
HMGN2P39-201ENST00000398005 CREBBPQ92793 2442 aa0.13□□□□□ -2.39
HMGN2P39-201ENST00000398005 A0A0C4DFX4 3053 aa0.12□□□□□ -2.39
HMGN2P39-201ENST00000398005 FSIP2Q5CZC0 6907 aa0.12□□□□□ -2.39
HMGN2P39-201ENST00000398005 MAST4O15021 2626 aa0.12□□□□□ -2.39
HMGN2P39-201ENST00000398005 MROH2BQ7Z745 1585 aa0.12□□□□□ -2.39
HMGN2P39-201ENST00000398005 CEP290O15078 2479 aa0.12□□□□□ -2.39
HMGN2P39-201ENST00000398005 NBASA2RRP1 2371 aa0.12□□□□□ -2.39
HMGN2P39-201ENST00000398005 PDZD2O15018 2839 aa0.12□□□□□ -2.39
HMGN2P39-201ENST00000398005 SVEP1Q4LDE5 3571 aa0.11□□□□□ -2.39
HMGN2P39-201ENST00000398005 SPRR2FQ96RM1 72 aa0.11□□□□□ -2.39
HMGN2P39-201ENST00000398005 HMCN2Q8NDA2 5059 aa0.11□□□□□ -2.39
HMGN2P39-201ENST00000398005 DMXL1Q9Y485 3027 aa0.11□□□□□ -2.39
HMGN2P39-201ENST00000398005 DUOX1Q9NRD9 1551 aa0.11□□□□□ -2.39
HMGN2P39-201ENST00000398005 STAB1Q9NY15 2570 aa0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 NF1P21359 2839 aa0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 ANKHD1Q8IWZ3 2542 aaKnown RBP0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 DCHS2Q6V1P9 2916 aa0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 RPL39LQ96EH5 51 aaKnown RBP0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 SONP18583 2426 aaKnown RBP0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 IGSF10Q6WRI0 2623 aa0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 COL6A3P12111 3177 aa0.1□□□□□ -2.39
HMGN2P39-201ENST00000398005 MAP1BP46821 2468 aaKnown RBP0.09□□□□□ -2.39
HMGN2P39-201ENST00000398005 LEAP2Q969E1 77 aa0.09□□□□□ -2.4
HMGN2P39-201ENST00000398005 NEBP20929 6669 aa0.09□□□□□ -2.4
HMGN2P39-201ENST00000398005 SRRM2Q9UQ35 2752 aaKnown RBP0.09□□□□□ -2.4
HMGN2P39-201ENST00000398005 SETD2Q9BYW2 2564 aaPredicted RBP0.08□□□□□ -2.4
HMGN2P39-201ENST00000398005 GCC2Q8IWJ2 1684 aa0.08□□□□□ -2.4
HMGN2P39-201ENST00000398005 GCN1Q92616 2671 aaKnown RBP0.08□□□□□ -2.4
HMGN2P39-201ENST00000398005 KRTAP8-1Q8IUC2 63 aa0.08□□□□□ -2.4
HMGN2P39-201ENST00000398005 PKD1P98161 4303 aa0.08□□□□□ -2.4
HMGN2P39-201ENST00000398005 TRIOO75962 3097 aa0.08□□□□□ -2.4
HMGN2P39-201ENST00000398005 PKHD1L1Q86WI1 4243 aa0.08□□□□□ -2.4
HMGN2P39-201ENST00000398005 ZZEF1O43149 2961 aa0.07□□□□□ -2.4
HMGN2P39-201ENST00000398005 SPENQ96T58 3664 aaKnown RBP0.07□□□□□ -2.4
HMGN2P39-201ENST00000398005 FLGP20930 4061 aaPredicted RBP0.07□□□□□ -2.4
HMGN2P39-201ENST00000398005 SACSQ9NZJ4 4579 aa0.07□□□□□ -2.4
HMGN2P39-201ENST00000398005 DNAH3Q8TD57 4116 aa0.07□□□□□ -2.4
HMGN2P39-201ENST00000398005 SSPOA2VEC9 5147 aa0.07□□□□□ -2.4
HMGN2P39-201ENST00000398005 FLNCQ14315 2725 aa0.07□□□□□ -2.4
HMGN2P39-201ENST00000398005 ZANQ9Y493 2812 aa0.06□□□□□ -2.4
HMGN2P39-201ENST00000398005 PKHD1P08F94 4074 aa0.06□□□□□ -2.4
HMGN2P39-201ENST00000398005 MTORP42345 2549 aa0.06□□□□□ -2.4
HMGN2P39-201ENST00000398005 SMR3BP02814 79 aaPredicted RBP0.06□□□□□ -2.4
HMGN2P39-201ENST00000398005 DEFB1P60022 68 aa0.06□□□□□ -2.4
HMGN2P39-201ENST00000398005 COL6A5A8TX70 2615 aa0.06□□□□□ -2.4
HMGN2P39-201ENST00000398005 TACC2O95359 2948 aa0.06□□□□□ -2.4
HMGN2P39-201ENST00000398005 LRP1BQ9NZR2 4599 aa0.05□□□□□ -2.4
HMGN2P39-201ENST00000398005 DMBT1Q9UGM3 2413 aaPredicted RBP0.05□□□□□ -2.4
HMGN2P39-201ENST00000398005 KRTAP19-5Q3LI72 72 aa0.05□□□□□ -2.4
HMGN2P39-201ENST00000398005 HTTP42858 3142 aa0.05□□□□□ -2.4
HMGN2P39-201ENST00000398005 AKAP9Q99996 3911 aa0.05□□□□□ -2.4
HMGN2P39-201ENST00000398005 RANBP2P49792 3224 aaKnown RBP0.05□□□□□ -2.4
HMGN2P39-201ENST00000398005 ANK3Q12955 4377 aaKnown RBP0.05□□□□□ -2.4
HMGN2P39-201ENST00000398005 LAMA5O15230 3695 aa0.04□□□□□ -2.4
HMGN2P39-201ENST00000398005 KALRNO60229 2985 aa0.04□□□□□ -2.4
HMGN2P39-201ENST00000398005 LRP2P98164 4655 aa0.04□□□□□ -2.4
HMGN2P39-201ENST00000398005 ANKRD11Q6UB99 2663 aaPredicted RBP0.04□□□□□ -2.4
HMGN2P39-201ENST00000398005 KRTAP19-7Q3SYF9 63 aa0.03□□□□□ -2.4
HMGN2P39-201ENST00000398005 LINC01590Q5TEZ4 76 aa0.03□□□□□ -2.4
HMGN2P39-201ENST00000398005 ACACBO00763 2458 aa0.02□□□□□ -2.41
HMGN2P39-201ENST00000398005 TGP01266 2768 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms