RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 IGLV7-43P04211 117 aa14.17□□□□□ -0.14
PABPN1-202ENST00000397276 HYDINQ4G0P3 5121 aa14.16□□□□□ -0.14
PABPN1-202ENST00000397276 MMP24-AS1A0A0U1RRL7 71 aa14.16□□□□□ -0.14
PABPN1-202ENST00000397276 PCOTHQ58A44 107 aa14.15□□□□□ -0.14
PABPN1-202ENST00000397276 CIRBP-AS1Q8TBR5 109 aa14.15□□□□□ -0.14
PABPN1-202ENST00000397276 ALMS1Q8TCU4 4167 aa14.14□□□□□ -0.15
PABPN1-202ENST00000397276 H3BPC8 53 aa14.12□□□□□ -0.15
PABPN1-202ENST00000397276 IGHV6-1A0A0B4J1U7 121 aa14.11□□□□□ -0.15
PABPN1-202ENST00000397276 COA5Q86WW8 74 aa14.11□□□□□ -0.15
PABPN1-202ENST00000397276 LIMD2Q9BT23 127 aa14.07□□□□□ -0.16
PABPN1-202ENST00000397276 SPINK6Q6UWN8 80 aa14.05□□□□□ -0.16
PABPN1-202ENST00000397276 SPTSSBQ8NFR3 76 aa14.04□□□□□ -0.16
PABPN1-202ENST00000397276 CDK2AP2O75956 126 aa14.04□□□□□ -0.16
PABPN1-202ENST00000397276 LCA10Q71F78 164 aa14.04□□□□□ -0.16
PABPN1-202ENST00000397276 C8orf17Q9NRJ1 99 aa14.04□□□□□ -0.16
PABPN1-202ENST00000397276 CD164Q04900 197 aa14.03□□□□□ -0.16
PABPN1-202ENST00000397276 IGLV7-46A0A075B6I9 117 aa14.03□□□□□ -0.16
PABPN1-202ENST00000397276 A0A087X002 238 aa14.01□□□□□ -0.17
PABPN1-202ENST00000397276 NOTCH2NLQ7Z3S9 236 aa14.01□□□□□ -0.17
PABPN1-202ENST00000397276 LRP1BQ9NZR2 4599 aa14.01□□□□□ -0.17
PABPN1-202ENST00000397276 A0A1B0GVX0 72 aa14□□□□□ -0.17
PABPN1-202ENST00000397276 NDUFS5O43920 106 aa14□□□□□ -0.17
PABPN1-202ENST00000397276 KRTAP10-1P60331 282 aa14□□□□□ -0.17
PABPN1-202ENST00000397276 PKD1P98161 4303 aa13.98□□□□□ -0.17
PABPN1-202ENST00000397276 FAT2Q9NYQ8 4349 aa13.98□□□□□ -0.17
PABPN1-202ENST00000397276 A6NED7 52 aa13.97□□□□□ -0.17
PABPN1-202ENST00000397276 SPAG11AQ6PDA7 123 aa13.96□□□□□ -0.17
PABPN1-202ENST00000397276 ASB16-AS1Q495Z4 193 aa13.94□□□□□ -0.18
PABPN1-202ENST00000397276 Q75L30 129 aa13.93□□□□□ -0.18
PABPN1-202ENST00000397276 LOC101927531A0A1B0GV80 90 aa13.91□□□□□ -0.18
PABPN1-202ENST00000397276 MRPL34Q9BQ48 92 aaKnown RBP13.88□□□□□ -0.19
PABPN1-202ENST00000397276 Q6ZSA8 131 aa13.87□□□□□ -0.19
PABPN1-202ENST00000397276 TP53AIP1Q9HCN2 124 aa13.86□□□□□ -0.19
PABPN1-202ENST00000397276 SSBP3-AS1Q7Z2R9 100 aa13.86□□□□□ -0.19
PABPN1-202ENST00000397276 HRES1P13985 223 aa13.83□□□□□ -0.19
PABPN1-202ENST00000397276 KRTAP13-2Q52LG2 175 aa13.83□□□□□ -0.2
PABPN1-202ENST00000397276 VPS13BQ7Z7G8 4022 aa13.83□□□□□ -0.2
PABPN1-202ENST00000397276 ATP11AUNQ6ZP68 121 aa13.8□□□□□ -0.2
PABPN1-202ENST00000397276 SPINK7P58062 85 aa13.78□□□□□ -0.2
PABPN1-202ENST00000397276 LINC01558Q9Y6Z2 57 aa13.78□□□□□ -0.2
PABPN1-202ENST00000397276 KTN1-AS1Q86SY8 53 aa13.78□□□□□ -0.2
PABPN1-202ENST00000397276 CDC42SE1Q9NRR8 79 aa13.76□□□□□ -0.21
PABPN1-202ENST00000397276 A6NN06 94 aa13.75□□□□□ -0.21
PABPN1-202ENST00000397276 PKHD1P08F94 4074 aa13.74□□□□□ -0.21
PABPN1-202ENST00000397276 PRR26Q8N8Z3 221 aa13.71□□□□□ -0.21
PABPN1-202ENST00000397276 Q5W150 140 aa13.71□□□□□ -0.21
PABPN1-202ENST00000397276 KRTAP1-4P0C5Y4 121 aa13.69□□□□□ -0.22
PABPN1-202ENST00000397276 RBM12B-AS1Q9P1G2 102 aa13.68□□□□□ -0.22
PABPN1-202ENST00000397276 SACSQ9NZJ4 4579 aa13.67□□□□□ -0.22
PABPN1-202ENST00000397276 PLA2G1BP04054 148 aaKnown RBP13.65□□□□□ -0.22
PABPN1-202ENST00000397276 LINC00313P59037 77 aa13.63□□□□□ -0.23
PABPN1-202ENST00000397276 KRTAP21-3Q3LHN1 58 aa13.63□□□□□ -0.23
PABPN1-202ENST00000397276 RETNLBQ9BQ08 111 aa13.63□□□□□ -0.23
PABPN1-202ENST00000397276 C8orf87E5RJ46 101 aa13.59□□□□□ -0.23
PABPN1-202ENST00000397276 SMR3BP02814 79 aaPredicted RBP13.57□□□□□ -0.24
PABPN1-202ENST00000397276 TYMSOSQ8TAI1 123 aa13.56□□□□□ -0.24
PABPN1-202ENST00000397276 KRTAP13-3Q3SY46 172 aa13.54□□□□□ -0.24
PABPN1-202ENST00000397276 C4orf48Q5BLP8 95 aa13.54□□□□□ -0.24
PABPN1-202ENST00000397276 C7orf65Q6ZTY9 151 aa13.48□□□□□ -0.25
PABPN1-202ENST00000397276 DYNC1H1Q14204 4646 aaKnown RBP13.48□□□□□ -0.25
PABPN1-202ENST00000397276 FAT1Q14517 4588 aa13.42□□□□□ -0.26
PABPN1-202ENST00000397276 KRTAP16-1A8MUX0 517 aa13.41□□□□□ -0.26
PABPN1-202ENST00000397276 ACYP2P14621 99 aa13.41□□□□□ -0.26
PABPN1-202ENST00000397276 FAM229AH3BQW9 127 aa13.4□□□□□ -0.26
PABPN1-202ENST00000397276 SPINK1P00995 79 aa13.39□□□□□ -0.27
PABPN1-202ENST00000397276 PRAC1Q96KF2 57 aa13.35□□□□□ -0.27
PABPN1-202ENST00000397276 LINC00304Q8N9R0 145 aa13.34□□□□□ -0.27
PABPN1-202ENST00000397276 ADM2Q7Z4H4 148 aa13.32□□□□□ -0.28
PABPN1-202ENST00000397276 DMAC1Q96GE9 116 aa13.32□□□□□ -0.28
PABPN1-202ENST00000397276 A0A1B0GVY2 172 aa13.29□□□□□ -0.28
PABPN1-202ENST00000397276 APOBP04114 4563 aaKnown RBP13.29□□□□□ -0.28
PABPN1-202ENST00000397276 IGKV2D-30A0A075B6S6 120 aa13.28□□□□□ -0.28
PABPN1-202ENST00000397276 IGKV2-30P06310 120 aa13.28□□□□□ -0.28
PABPN1-202ENST00000397276 KMT2CQ8NEZ4 4911 aaKnown RBP13.26□□□□□ -0.29
PABPN1-202ENST00000397276 A0A1B0GU69 56 aa13.25□□□□□ -0.29
PABPN1-202ENST00000397276 RYR2Q92736 4967 aa13.22□□□□□ -0.29
PABPN1-202ENST00000397276 KRTAP10-4P60372 401 aaPredicted RBP13.16□□□□□ -0.3
PABPN1-202ENST00000397276 C9orf92A6NGG3 77 aa13.14□□□□□ -0.31
PABPN1-202ENST00000397276 SPATA8Q6RVD6 105 aa13.11□□□□□ -0.31
PABPN1-202ENST00000397276 RPS29P62273 56 aaKnown RBP13.1□□□□□ -0.31
PABPN1-202ENST00000397276 MIR22HGQ0VDD5 57 aa13.07□□□□□ -0.32
PABPN1-202ENST00000397276 PKHD1L1Q86WI1 4243 aa13.05□□□□□ -0.32
PABPN1-202ENST00000397276 UQCR11O14957 56 aa13.02□□□□□ -0.32
PABPN1-202ENST00000397276 Q8N1X5 172 aa12.96□□□□□ -0.33
PABPN1-202ENST00000397276 LRP1Q07954 4544 aaKnown RBP12.93□□□□□ -0.34
PABPN1-202ENST00000397276 LINC01554Q52M75 96 aa12.86□□□□□ -0.35
PABPN1-202ENST00000397276 C20orf166-AS1Q96NR2 134 aa12.86□□□□□ -0.35
PABPN1-202ENST00000397276 A8MUU9 505 aa12.85□□□□□ -0.35
PABPN1-202ENST00000397276 RYR3Q15413 4870 aa12.83□□□□□ -0.36
PABPN1-202ENST00000397276 CSAG1Q6PB30 78 aa12.82□□□□□ -0.36
PABPN1-202ENST00000397276 FLG2Q5D862 2391 aaPredicted RBP12.82□□□□□ -0.36
PABPN1-202ENST00000397276 HSPG2P98160 4391 aa12.8□□□□□ -0.36
PABPN1-202ENST00000397276 Q5VSD8 79 aa12.77□□□□□ -0.36
PABPN1-202ENST00000397276 TNXBP22105 4242 aa12.76□□□□□ -0.37
PABPN1-202ENST00000397276 FAT3Q8TDW7 4589 aa12.73□□□□□ -0.37
PABPN1-202ENST00000397276 DMBT1Q9UGM3 2413 aaPredicted RBP12.67□□□□□ -0.38
PABPN1-202ENST00000397276 KRTAP10-8P60410 259 aa12.66□□□□□ -0.38
PABPN1-202ENST00000397276 KRTAP17-1Q9BYP8 105 aa12.64□□□□□ -0.39
PABPN1-202ENST00000397276 KRTAP3-1Q9BYR8 98 aa12.64□□□□□ -0.39
PABPN1-202ENST00000397276 H0YAA0 97 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms