RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 FLG2Q5D862 2391 aaPredicted RBP9.46□□□□□ -0.89
ATP2A3-205ENST00000397041 A8MU10 97 aa9.46□□□□□ -0.9
ATP2A3-205ENST00000397041 A0A087X002 238 aa9.45□□□□□ -0.9
ATP2A3-205ENST00000397041 A0A0D9SG42 100 aa9.45□□□□□ -0.9
ATP2A3-205ENST00000397041 NOTCH2NLQ7Z3S9 236 aa9.45□□□□□ -0.9
ATP2A3-205ENST00000397041 LCE6AA0A183 80 aa9.42□□□□□ -0.9
ATP2A3-205ENST00000397041 Q6ZR54 194 aa9.39□□□□□ -0.91
ATP2A3-205ENST00000397041 TENM4Q6N022 2769 aa9.38□□□□□ -0.91
ATP2A3-205ENST00000397041 TENM3Q9P273 2699 aa9.38□□□□□ -0.91
ATP2A3-205ENST00000397041 SPENQ96T58 3664 aaKnown RBP9.38□□□□□ -0.91
ATP2A3-205ENST00000397041 LINC01554Q52M75 96 aa9.38□□□□□ -0.91
ATP2A3-205ENST00000397041 A0A1B0GU33 70 aa9.36□□□□□ -0.91
ATP2A3-205ENST00000397041 LINC00483Q53H64 154 aa9.33□□□□□ -0.92
ATP2A3-205ENST00000397041 CSAG1Q6PB30 78 aa9.33□□□□□ -0.92
ATP2A3-205ENST00000397041 CRIPTQ9P021 101 aa9.32□□□□□ -0.92
ATP2A3-205ENST00000397041 DMAC1Q96GE9 116 aa9.3□□□□□ -0.92
ATP2A3-205ENST00000397041 TENM1Q9UKZ4 2725 aa9.28□□□□□ -0.92
ATP2A3-205ENST00000397041 PDZD2O15018 2839 aa9.28□□□□□ -0.92
ATP2A3-205ENST00000397041 VWFP04275 2813 aa9.27□□□□□ -0.93
ATP2A3-205ENST00000397041 KRTAP10-2P60368 255 aa9.26□□□□□ -0.93
ATP2A3-205ENST00000397041 FBN1P35555 2871 aaKnown RBP9.21□□□□□ -0.94
ATP2A3-205ENST00000397041 KRTAP10-1P60331 282 aa9.2□□□□□ -0.94
ATP2A3-205ENST00000397041 A6NN06 94 aa9.19□□□□□ -0.94
ATP2A3-205ENST00000397041 Q6ZRN7 208 aaPredicted RBP9.16□□□□□ -0.94
ATP2A3-205ENST00000397041 KRTAP13-1Q8IUC0 172 aa9.15□□□□□ -0.94
ATP2A3-205ENST00000397041 H3BS24 57 aa9.14□□□□□ -0.95
ATP2A3-205ENST00000397041 ADM2Q7Z4H4 148 aa9.13□□□□□ -0.95
ATP2A3-205ENST00000397041 SPATA8Q6RVD6 105 aa9.08□□□□□ -0.96
ATP2A3-205ENST00000397041 CSMD2Q7Z408 3487 aa9.07□□□□□ -0.96
ATP2A3-205ENST00000397041 PKD1L1Q8TDX9 2849 aa9.05□□□□□ -0.96
ATP2A3-205ENST00000397041 KRTAP13-2Q52LG2 175 aa8.99□□□□□ -0.97
ATP2A3-205ENST00000397041 H1FX-AS1Q4G0G2 97 aa8.99□□□□□ -0.97
ATP2A3-205ENST00000397041 OTOGQ6ZRI0 2925 aa8.99□□□□□ -0.97
ATP2A3-205ENST00000397041 COX6B2Q6YFQ2 88 aa8.99□□□□□ -0.97
ATP2A3-205ENST00000397041 NBPF19A0A087WUL8 3843 aa8.97□□□□□ -0.97
ATP2A3-205ENST00000397041 TGP01266 2768 aa8.96□□□□□ -0.97
ATP2A3-205ENST00000397041 ASB16-AS1Q495Z4 193 aa8.95□□□□□ -0.98
ATP2A3-205ENST00000397041 Q6ZSA8 131 aa8.94□□□□□ -0.98
ATP2A3-205ENST00000397041 S4R3F8 94 aa8.93□□□□□ -0.98
ATP2A3-205ENST00000397041 RPL37P61927 97 aaKnown RBP8.93□□□□□ -0.98
ATP2A3-205ENST00000397041 TENM2Q9NT68 2774 aa8.93□□□□□ -0.98
ATP2A3-205ENST00000397041 J3QL48 77 aa8.92□□□□□ -0.98
ATP2A3-205ENST00000397041 ZFHX3Q15911 3703 aa8.9□□□□□ -0.99
ATP2A3-205ENST00000397041 ROMO1P60602 79 aa8.87□□□□□ -0.99
ATP2A3-205ENST00000397041 BSNQ9UPA5 3926 aa8.85□□□□□ -0.99
ATP2A3-205ENST00000397041 SRRM2Q9UQ35 2752 aaKnown RBP8.79□□□□□ -1
ATP2A3-205ENST00000397041 CAMK2N1Q7Z7J9 78 aa8.78□□□□□ -1
ATP2A3-205ENST00000397041 KRTAP25-1Q3LHN0 102 aa8.77□□□□□ -1.01
ATP2A3-205ENST00000397041 R4GN34 69 aa8.74□□□□□ -1.01
ATP2A3-205ENST00000397041 LUZP6Q538Z0 58 aa8.73□□□□□ -1.01
ATP2A3-205ENST00000397041 Q5VSD8 79 aa8.72□□□□□ -1.01
ATP2A3-205ENST00000397041 TRRAPQ9Y4A5 3859 aa8.7□□□□□ -1.02
ATP2A3-205ENST00000397041 M0QZ58 72 aa8.65□□□□□ -1.02
ATP2A3-205ENST00000397041 FBN3Q75N90 2809 aa8.63□□□□□ -1.03
ATP2A3-205ENST00000397041 RPS29P62273 56 aaKnown RBP8.62□□□□□ -1.03
ATP2A3-205ENST00000397041 KRTAP1-4P0C5Y4 121 aa8.62□□□□□ -1.03
ATP2A3-205ENST00000397041 VPS13CQ709C8 3753 aa8.61□□□□□ -1.03
ATP2A3-205ENST00000397041 A8MUU9 505 aa8.55□□□□□ -1.04
ATP2A3-205ENST00000397041 KRTAP16-1A8MUX0 517 aa8.55□□□□□ -1.04
ATP2A3-205ENST00000397041 H0YAA0 97 aa8.54□□□□□ -1.04
ATP2A3-205ENST00000397041 C20orf166-AS1Q96NR2 134 aa8.52□□□□□ -1.05
ATP2A3-205ENST00000397041 KRTAP13-3Q3SY46 172 aa8.51□□□□□ -1.05
ATP2A3-205ENST00000397041 NDUFAF8A1L188 74 aa8.47□□□□□ -1.05
ATP2A3-205ENST00000397041 SEC61BP60468 96 aaKnown RBP8.44□□□□□ -1.06
ATP2A3-205ENST00000397041 ANK3Q12955 4377 aaKnown RBP8.44□□□□□ -1.06
ATP2A3-205ENST00000397041 C10orf95Q9H7T3 257 aa8.42□□□□□ -1.06
ATP2A3-205ENST00000397041 MEGF8Q7Z7M0 2845 aa8.41□□□□□ -1.06
ATP2A3-205ENST00000397041 M0R2T5 61 aa8.4□□□□□ -1.06
ATP2A3-205ENST00000397041 COL7A1Q02388 2944 aa8.37□□□□□ -1.07
ATP2A3-205ENST00000397041 A0A0A0MQY5 61 aa8.34□□□□□ -1.07
ATP2A3-205ENST00000397041 CSMD3Q7Z407 3707 aa8.27□□□□□ -1.09
ATP2A3-205ENST00000397041 ZNF469Q96JG9 3925 aaPredicted RBP8.26□□□□□ -1.09
ATP2A3-205ENST00000397041 XP32Q5T750 250 aa8.23□□□□□ -1.09
ATP2A3-205ENST00000397041 P0C880 135 aa8.22□□□□□ -1.09
ATP2A3-205ENST00000397041 KRTAP21-3Q3LHN1 58 aa8.16□□□□□ -1.1
ATP2A3-205ENST00000397041 KRTAP3-1Q9BYR8 98 aa8.08□□□□□ -1.12
ATP2A3-205ENST00000397041 PLAC4Q8WY50 150 aa8.06□□□□□ -1.12
ATP2A3-205ENST00000397041 AKAP9Q99996 3911 aa8.03□□□□□ -1.12
ATP2A3-205ENST00000397041 KRTAP10-8P60410 259 aa7.96□□□□□ -1.14
ATP2A3-205ENST00000397041 KRTAP12-2P59991 146 aa7.94□□□□□ -1.14
ATP2A3-205ENST00000397041 TNP1P09430 55 aa7.92□□□□□ -1.14
ATP2A3-205ENST00000397041 TPRXLQ17RH7 258 aa7.91□□□□□ -1.14
ATP2A3-205ENST00000397041 A0A1B0GVY2 172 aa7.87□□□□□ -1.15
ATP2A3-205ENST00000397041 HUWE1Q7Z6Z7 4374 aaKnown RBP7.86□□□□□ -1.15
ATP2A3-205ENST00000397041 KRTAP13-4Q3LI77 160 aa7.86□□□□□ -1.15
ATP2A3-205ENST00000397041 KRTAP10-6P60371 365 aaPredicted RBP7.8□□□□□ -1.16
ATP2A3-205ENST00000397041 KRTAP12-1P59990 96 aa7.8□□□□□ -1.16
ATP2A3-205ENST00000397041 PP632Q6XCG6 107 aa7.78□□□□□ -1.16
ATP2A3-205ENST00000397041 DNAH10Q8IVF4 4471 aa7.63□□□□□ -1.19
ATP2A3-205ENST00000397041 KRTAP3-3Q9BYR6 98 aa7.59□□□□□ -1.19
ATP2A3-205ENST00000397041 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
ATP2A3-205ENST00000397041 PLECQ15149 4684 aaKnown RBP7.52□□□□□ -1.21
ATP2A3-205ENST00000397041 DNAH9Q9NYC9 4486 aa7.5□□□□□ -1.21
ATP2A3-205ENST00000397041 DNAH11Q96DT5 4516 aa7.47□□□□□ -1.21
ATP2A3-205ENST00000397041 KRTAP10-10P60014 251 aa7.46□□□□□ -1.22
ATP2A3-205ENST00000397041 DNAH1Q9P2D7 4330 aa7.45□□□□□ -1.22
ATP2A3-205ENST00000397041 KRTAP10-4P60372 401 aaPredicted RBP7.42□□□□□ -1.22
ATP2A3-205ENST00000397041 KRTAP15-1Q3LI76 137 aa7.4□□□□□ -1.22
ATP2A3-205ENST00000397041 DNAH5Q8TE73 4624 aa7.36□□□□□ -1.23
ATP2A3-205ENST00000397041 MT1HL1P0DM35 61 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms