RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 MMP24-AS1A0A0U1RRL7 71 aa10.08□□□□□ -0.8
SCNN1A-205ENST00000396966 KRTAP1-4P0C5Y4 121 aa10.08□□□□□ -0.8
SCNN1A-205ENST00000396966 VPS13BQ7Z7G8 4022 aa10.08□□□□□ -0.8
SCNN1A-205ENST00000396966 H0Y9P7 68 aa10.07□□□□□ -0.8
SCNN1A-205ENST00000396966 KRTAP13-2Q52LG2 175 aa10.06□□□□□ -0.8
SCNN1A-205ENST00000396966 MPLKIPQ8TAP9 179 aa10.06□□□□□ -0.8
SCNN1A-205ENST00000396966 TRAV22A0A0B4J277 110 aa10.05□□□□□ -0.8
SCNN1A-205ENST00000396966 hDV103S1A0JD37 113 aa10.05□□□□□ -0.8
SCNN1A-205ENST00000396966 PLA2G1BP04054 148 aaKnown RBP10.05□□□□□ -0.8
SCNN1A-205ENST00000396966 C1orf64Q8NEQ6 169 aa10.05□□□□□ -0.8
SCNN1A-205ENST00000396966 IGHV6-1A0A0B4J1U7 121 aa10□□□□□ -0.81
SCNN1A-205ENST00000396966 APOBP04114 4563 aaKnown RBP10□□□□□ -0.81
SCNN1A-205ENST00000396966 H3BPC8 53 aa10□□□□□ -0.81
SCNN1A-205ENST00000396966 CYP4F30PQ9H0H9 118 aa10□□□□□ -0.81
SCNN1A-205ENST00000396966 C8orf17Q9NRJ1 99 aa9.99□□□□□ -0.81
SCNN1A-205ENST00000396966 TYMSOSQ8TAI1 123 aa9.98□□□□□ -0.81
SCNN1A-205ENST00000396966 CDK2AP2O75956 126 aa9.97□□□□□ -0.81
SCNN1A-205ENST00000396966 KRTAP10-4P60372 401 aaPredicted RBP9.97□□□□□ -0.81
SCNN1A-205ENST00000396966 A0A1B0GVX0 72 aa9.96□□□□□ -0.81
SCNN1A-205ENST00000396966 ASB16-AS1Q495Z4 193 aa9.96□□□□□ -0.82
SCNN1A-205ENST00000396966 C4orf48Q5BLP8 95 aa9.94□□□□□ -0.82
SCNN1A-205ENST00000396966 FAM229AH3BQW9 127 aa9.93□□□□□ -0.82
SCNN1A-205ENST00000396966 NDUFS5O43920 106 aa9.93□□□□□ -0.82
SCNN1A-205ENST00000396966 NOTCH2NLQ7Z3S9 236 aa9.93□□□□□ -0.82
SCNN1A-205ENST00000396966 LIMD2Q9BT23 127 aa9.92□□□□□ -0.82
SCNN1A-205ENST00000396966 RYR3Q15413 4870 aa9.91□□□□□ -0.82
SCNN1A-205ENST00000396966 PRR26Q8N8Z3 221 aa9.9□□□□□ -0.82
SCNN1A-205ENST00000396966 SPANXA2-OT1Q8N9U9 137 aa9.9□□□□□ -0.82
SCNN1A-205ENST00000396966 TP53AIP1Q9HCN2 124 aa9.9□□□□□ -0.82
SCNN1A-205ENST00000396966 SPINK1P00995 79 aa9.88□□□□□ -0.83
SCNN1A-205ENST00000396966 MRPL34Q9BQ48 92 aaKnown RBP9.88□□□□□ -0.83
SCNN1A-205ENST00000396966 PCOTHQ58A44 107 aa9.86□□□□□ -0.83
SCNN1A-205ENST00000396966 LINC00304Q8N9R0 145 aa9.85□□□□□ -0.83
SCNN1A-205ENST00000396966 Q1T7F1 81 aa9.84□□□□□ -0.83
SCNN1A-205ENST00000396966 SPAG11AQ6PDA7 123 aa9.84□□□□□ -0.83
SCNN1A-205ENST00000396966 FAT1Q14517 4588 aa9.84□□□□□ -0.83
SCNN1A-205ENST00000396966 C1orf195Q5TG92 126 aa9.83□□□□□ -0.84
SCNN1A-205ENST00000396966 PRO0628Q9UI54 55 aa9.83□□□□□ -0.84
SCNN1A-205ENST00000396966 Q5VSD8 79 aa9.82□□□□□ -0.84
SCNN1A-205ENST00000396966 BRK1Q8WUW1 75 aa9.82□□□□□ -0.84
SCNN1A-205ENST00000396966 RPS29P62273 56 aaKnown RBP9.81□□□□□ -0.84
SCNN1A-205ENST00000396966 IGLV7-46A0A075B6I9 117 aa9.79□□□□□ -0.84
SCNN1A-205ENST00000396966 PSPHP1O15172 72 aa9.78□□□□□ -0.84
SCNN1A-205ENST00000396966 C8orf87E5RJ46 101 aa9.77□□□□□ -0.85
SCNN1A-205ENST00000396966 PKHD1L1Q86WI1 4243 aa9.74□□□□□ -0.85
SCNN1A-205ENST00000396966 Q5W150 140 aa9.74□□□□□ -0.85
SCNN1A-205ENST00000396966 COA5Q86WW8 74 aa9.73□□□□□ -0.85
SCNN1A-205ENST00000396966 HSPG2P98160 4391 aa9.72□□□□□ -0.85
SCNN1A-205ENST00000396966 LINC00313P59037 77 aa9.72□□□□□ -0.85
SCNN1A-205ENST00000396966 V9GYY9 64 aa9.71□□□□□ -0.85
SCNN1A-205ENST00000396966 A8MUN3 132 aa9.7□□□□□ -0.86
SCNN1A-205ENST00000396966 Q8N9P0 234 aaPredicted RBP9.68□□□□□ -0.86
SCNN1A-205ENST00000396966 KRTAP13-3Q3SY46 172 aa9.66□□□□□ -0.86
SCNN1A-205ENST00000396966 RYR1P21817 5038 aa9.66□□□□□ -0.86
SCNN1A-205ENST00000396966 LOC101927531A0A1B0GV80 90 aa9.66□□□□□ -0.86
SCNN1A-205ENST00000396966 Q8N1X5 172 aa9.66□□□□□ -0.86
SCNN1A-205ENST00000396966 RETNLBQ9BQ08 111 aa9.62□□□□□ -0.87
SCNN1A-205ENST00000396966 KRTAP10-8P60410 259 aa9.61□□□□□ -0.87
SCNN1A-205ENST00000396966 KRTAP17-1Q9BYP8 105 aa9.61□□□□□ -0.87
SCNN1A-205ENST00000396966 HRES1P13985 223 aa9.6□□□□□ -0.87
SCNN1A-205ENST00000396966 Q5VV11 94 aa9.6□□□□□ -0.87
SCNN1A-205ENST00000396966 PRR15LQ9BU68 103 aa9.59□□□□□ -0.87
SCNN1A-205ENST00000396966 KRTAP16-1A8MUX0 517 aa9.57□□□□□ -0.88
SCNN1A-205ENST00000396966 EPPK1P58107 5090 aaKnown RBP9.56□□□□□ -0.88
SCNN1A-205ENST00000396966 KIAA1109Q2LD37 5005 aa9.55□□□□□ -0.88
SCNN1A-205ENST00000396966 CHKB-CPT1BH3BT56 60 aa9.54□□□□□ -0.88
SCNN1A-205ENST00000396966 A8MU10 97 aa9.49□□□□□ -0.89
SCNN1A-205ENST00000396966 FLG2Q5D862 2391 aaPredicted RBP9.49□□□□□ -0.89
SCNN1A-205ENST00000396966 LRP1Q07954 4544 aaKnown RBP9.48□□□□□ -0.89
SCNN1A-205ENST00000396966 TNXBP22105 4242 aa9.48□□□□□ -0.89
SCNN1A-205ENST00000396966 IGKV2-30P06310 120 aa9.46□□□□□ -0.9
SCNN1A-205ENST00000396966 Q75L30 129 aa9.45□□□□□ -0.9
SCNN1A-205ENST00000396966 LINC01558Q9Y6Z2 57 aa9.45□□□□□ -0.9
SCNN1A-205ENST00000396966 ACYP2P14621 99 aa9.45□□□□□ -0.9
SCNN1A-205ENST00000396966 FAT3Q8TDW7 4589 aa9.44□□□□□ -0.9
SCNN1A-205ENST00000396966 C9orf92A6NGG3 77 aa9.44□□□□□ -0.9
SCNN1A-205ENST00000396966 MT1HL1P0DM35 61 aa9.42□□□□□ -0.9
SCNN1A-205ENST00000396966 A6NED7 52 aa9.42□□□□□ -0.9
SCNN1A-205ENST00000396966 IGKV2D-30A0A075B6S6 120 aa9.41□□□□□ -0.9
SCNN1A-205ENST00000396966 DMAC1Q96GE9 116 aa9.41□□□□□ -0.9
SCNN1A-205ENST00000396966 LCA10Q71F78 164 aa9.36□□□□□ -0.91
SCNN1A-205ENST00000396966 C20orf166-AS1Q96NR2 134 aa9.36□□□□□ -0.91
SCNN1A-205ENST00000396966 A8MUU9 505 aa9.35□□□□□ -0.91
SCNN1A-205ENST00000396966 KRTAP4-5Q9BYR2 181 aa9.34□□□□□ -0.91
SCNN1A-205ENST00000396966 DMBT1Q9UGM3 2413 aaPredicted RBP9.31□□□□□ -0.92
SCNN1A-205ENST00000396966 SPINK7P58062 85 aa9.3□□□□□ -0.92
SCNN1A-205ENST00000396966 SEC61GP60059 68 aa9.3□□□□□ -0.92
SCNN1A-205ENST00000396966 SPTSSBQ8NFR3 76 aa9.3□□□□□ -0.92
SCNN1A-205ENST00000396966 MYCBP2O75592 4640 aa9.28□□□□□ -0.92
SCNN1A-205ENST00000396966 C7orf65Q6ZTY9 151 aa9.27□□□□□ -0.93
SCNN1A-205ENST00000396966 PMAIP1Q13794 54 aa9.26□□□□□ -0.93
SCNN1A-205ENST00000396966 CDC42SE1Q9NRR8 79 aa9.26□□□□□ -0.93
SCNN1A-205ENST00000396966 ATP11AUNQ6ZP68 121 aa9.22□□□□□ -0.93
SCNN1A-205ENST00000396966 A0A1B0GU69 56 aa9.18□□□□□ -0.94
SCNN1A-205ENST00000396966 XP32Q5T750 250 aa9.16□□□□□ -0.94
SCNN1A-205ENST00000396966 RPL37P61927 97 aaKnown RBP9.15□□□□□ -0.95
SCNN1A-205ENST00000396966 J3QL48 77 aa9.14□□□□□ -0.95
SCNN1A-205ENST00000396966 BIRC6Q9NR09 4857 aa9.14□□□□□ -0.95
SCNN1A-205ENST00000396966 TPRXLQ17RH7 258 aa9.1□□□□□ -0.95
SCNN1A-205ENST00000396966 A6NN06 94 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms