RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 LINC00643Q86TS7 51 aa7.88□□□□□ -1.15
GAPDH-203ENST00000396858 Q8N9L7 120 aa7.88□□□□□ -1.15
GAPDH-203ENST00000396858 HMCN2Q8NDA2 5059 aa7.87□□□□□ -1.15
GAPDH-203ENST00000396858 PRR4Q16378 134 aa7.87□□□□□ -1.15
GAPDH-203ENST00000396858 ATP5EP2Q5VTU8 51 aa7.87□□□□□ -1.15
GAPDH-203ENST00000396858 FP248Q71RG6 208 aaPredicted RBP7.87□□□□□ -1.15
GAPDH-203ENST00000396858 A8MWP4 228 aa7.86□□□□□ -1.15
GAPDH-203ENST00000396858 K7EQZ3 153 aa7.86□□□□□ -1.15
GAPDH-203ENST00000396858 CXCL6P80162 114 aa7.85□□□□□ -1.15
GAPDH-203ENST00000396858 IGLV7-46A0A075B6I9 117 aa7.84□□□□□ -1.15
GAPDH-203ENST00000396858 IGHV6-1A0A0B4J1U7 121 aa7.84□□□□□ -1.15
GAPDH-203ENST00000396858 A0A1B0GVX0 72 aa7.84□□□□□ -1.15
GAPDH-203ENST00000396858 NDUFB1O75438 58 aa7.81□□□□□ -1.16
GAPDH-203ENST00000396858 MT-ATP8P03928 68 aa7.81□□□□□ -1.16
GAPDH-203ENST00000396858 PRR15Q8IV56 129 aa7.81□□□□□ -1.16
GAPDH-203ENST00000396858 C9orf92A6NGG3 77 aa7.8□□□□□ -1.16
GAPDH-203ENST00000396858 NOTCH2NLQ7Z3S9 236 aa7.79□□□□□ -1.16
GAPDH-203ENST00000396858 HIST1H4AP62805 103 aaKnown RBP7.78□□□□□ -1.16
GAPDH-203ENST00000396858 MMP24-AS1A0A0U1RRL7 71 aa7.77□□□□□ -1.17
GAPDH-203ENST00000396858 KRTAP13-3Q3SY46 172 aa7.77□□□□□ -1.17
GAPDH-203ENST00000396858 C8orf17Q9NRJ1 99 aa7.77□□□□□ -1.17
GAPDH-203ENST00000396858 A0A087WVE0 104 aa7.76□□□□□ -1.17
GAPDH-203ENST00000396858 C8orf87E5RJ46 101 aa7.76□□□□□ -1.17
GAPDH-203ENST00000396858 TPRXLQ17RH7 258 aa7.74□□□□□ -1.17
GAPDH-203ENST00000396858 WFDC13Q8IUB5 93 aa7.73□□□□□ -1.17
GAPDH-203ENST00000396858 LPAP08519 4548 aa7.73□□□□□ -1.17
GAPDH-203ENST00000396858 HCG22E2RYF7 251 aa7.72□□□□□ -1.17
GAPDH-203ENST00000396858 LINC00313P59037 77 aa7.72□□□□□ -1.17
GAPDH-203ENST00000396858 KRTAP16-1A8MUX0 517 aa7.71□□□□□ -1.18
GAPDH-203ENST00000396858 hDV103S1A0JD37 113 aa7.69□□□□□ -1.18
GAPDH-203ENST00000396858 CASC2Q6XLA1 102 aa7.69□□□□□ -1.18
GAPDH-203ENST00000396858 XP32Q5T750 250 aa7.68□□□□□ -1.18
GAPDH-203ENST00000396858 TMEM254Q8TBM7 123 aa7.67□□□□□ -1.18
GAPDH-203ENST00000396858 LRP2P98164 4655 aa7.67□□□□□ -1.18
GAPDH-203ENST00000396858 IMUPQ9GZP8 106 aa7.66□□□□□ -1.18
GAPDH-203ENST00000396858 MRPL34Q9BQ48 92 aaKnown RBP7.65□□□□□ -1.18
GAPDH-203ENST00000396858 FAM236AA0A1B0GUQ0 79 aa7.62□□□□□ -1.19
GAPDH-203ENST00000396858 FAM236BA0A1B0GV22 79 aa7.62□□□□□ -1.19
GAPDH-203ENST00000396858 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
GAPDH-203ENST00000396858 NDUFS5O43920 106 aa7.61□□□□□ -1.19
GAPDH-203ENST00000396858 A8MUU9 505 aa7.6□□□□□ -1.19
GAPDH-203ENST00000396858 Q8N9P0 234 aaPredicted RBP7.6□□□□□ -1.19
GAPDH-203ENST00000396858 RPL37P61927 97 aaKnown RBP7.59□□□□□ -1.19
GAPDH-203ENST00000396858 Q75L30 129 aa7.59□□□□□ -1.19
GAPDH-203ENST00000396858 MUC17Q685J3 4493 aa7.55□□□□□ -1.2
GAPDH-203ENST00000396858 SCGB1A1P11684 91 aa7.52□□□□□ -1.21
GAPDH-203ENST00000396858 UBR4Q5T4S7 5183 aa7.52□□□□□ -1.21
GAPDH-203ENST00000396858 ZCCHC13Q8WW36 166 aaKnown RBP7.51□□□□□ -1.21
GAPDH-203ENST00000396858 PCOTHQ58A44 107 aa7.5□□□□□ -1.21
GAPDH-203ENST00000396858 OCR1Q9BZK8 76 aa7.49□□□□□ -1.21
GAPDH-203ENST00000396858 ATOX1O00244 68 aa7.48□□□□□ -1.21
GAPDH-203ENST00000396858 ATP11AUNQ6ZP68 121 aa7.48□□□□□ -1.21
GAPDH-203ENST00000396858 Q5W150 140 aa7.47□□□□□ -1.21
GAPDH-203ENST00000396858 TP53AIP1Q9HCN2 124 aa7.47□□□□□ -1.21
GAPDH-203ENST00000396858 SEC61BP60468 96 aaKnown RBP7.46□□□□□ -1.22
GAPDH-203ENST00000396858 UQCRQO14949 82 aa7.45□□□□□ -1.22
GAPDH-203ENST00000396858 RNF213Q63HN8 5207 aa7.44□□□□□ -1.22
GAPDH-203ENST00000396858 TRAV22A0A0B4J277 110 aa7.43□□□□□ -1.22
GAPDH-203ENST00000396858 TRAV7A0A075B6U4 112 aa7.41□□□□□ -1.22
GAPDH-203ENST00000396858 H0Y9P7 68 aa7.41□□□□□ -1.22
GAPDH-203ENST00000396858 SMIM20Q8N5G0 67 aa7.41□□□□□ -1.22
GAPDH-203ENST00000396858 IGKV2D-30A0A075B6S6 120 aa7.37□□□□□ -1.23
GAPDH-203ENST00000396858 IGKV2-30P06310 120 aa7.37□□□□□ -1.23
GAPDH-203ENST00000396858 SERP2Q8N6R1 65 aa7.36□□□□□ -1.23
GAPDH-203ENST00000396858 ANAPC13Q9BS18 74 aa7.36□□□□□ -1.23
GAPDH-203ENST00000396858 KRTAP4-1Q9BYQ7 146 aa7.36□□□□□ -1.23
GAPDH-203ENST00000396858 MP68P56378 58 aa7.34□□□□□ -1.23
GAPDH-203ENST00000396858 C7orf65Q6ZTY9 151 aa7.34□□□□□ -1.23
GAPDH-203ENST00000396858 C5orf47Q569G3 176 aa7.33□□□□□ -1.24
GAPDH-203ENST00000396858 SPINK7P58062 85 aa7.32□□□□□ -1.24
GAPDH-203ENST00000396858 LINC00208Q96KT6 92 aa7.32□□□□□ -1.24
GAPDH-203ENST00000396858 LOC101927531A0A1B0GV80 90 aa7.31□□□□□ -1.24
GAPDH-203ENST00000396858 C1orf64Q8NEQ6 169 aa7.31□□□□□ -1.24
GAPDH-203ENST00000396858 LOC100996750A0A140TA64 210 aa7.29□□□□□ -1.24
GAPDH-203ENST00000396858 COX7CP15954 63 aa7.29□□□□□ -1.24
GAPDH-203ENST00000396858 KRTAP4-6Q9BYQ5 205 aa7.29□□□□□ -1.24
GAPDH-203ENST00000396858 C20orf197Q8N268 126 aa7.28□□□□□ -1.24
GAPDH-203ENST00000396858 A0A0U1RQV1 116 aa7.27□□□□□ -1.25
GAPDH-203ENST00000396858 H3BPC8 53 aa7.27□□□□□ -1.25
GAPDH-203ENST00000396858 SNURFQ9Y675 71 aa7.27□□□□□ -1.25
GAPDH-203ENST00000396858 CYP4F30PQ9H0H9 118 aa7.26□□□□□ -1.25
GAPDH-203ENST00000396858 MUC2Q02817 5179 aa7.25□□□□□ -1.25
GAPDH-203ENST00000396858 HRES1P13985 223 aa7.25□□□□□ -1.25
GAPDH-203ENST00000396858 KLKP1Q107X0 134 aa7.22□□□□□ -1.25
GAPDH-203ENST00000396858 CCDC179H3BU77 68 aa7.21□□□□□ -1.26
GAPDH-203ENST00000396858 CYSTM1Q9H1C7 97 aa7.18□□□□□ -1.26
GAPDH-203ENST00000396858 C4orf26Q17RF5 130 aa7.17□□□□□ -1.26
GAPDH-203ENST00000396858 MPLKIPQ8TAP9 179 aa7.16□□□□□ -1.26
GAPDH-203ENST00000396858 RBM12B-AS1Q9P1G2 102 aa7.13□□□□□ -1.27
GAPDH-203ENST00000396858 FAT4Q6V0I7 4981 aa7.12□□□□□ -1.27
GAPDH-203ENST00000396858 FAM236DA0A1B0GTK5 79 aa7.12□□□□□ -1.27
GAPDH-203ENST00000396858 FAM236CP0DP71 79 aa7.12□□□□□ -1.27
GAPDH-203ENST00000396858 KRTAP19-2Q3LHN2 52 aa7.11□□□□□ -1.27
GAPDH-203ENST00000396858 COX6B2Q6YFQ2 88 aa7.1□□□□□ -1.27
GAPDH-203ENST00000396858 PCP4P48539 62 aa7.09□□□□□ -1.27
GAPDH-203ENST00000396858 H7BZZ5 65 aa7.08□□□□□ -1.28
GAPDH-203ENST00000396858 NDUFC1O43677 76 aa7.06□□□□□ -1.28
GAPDH-203ENST00000396858 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
GAPDH-203ENST00000396858 SPANXA2-OT1Q8N9U9 137 aa7.01□□□□□ -1.29
GAPDH-203ENST00000396858 DMAC1Q96GE9 116 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms