RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 H0Y9P7 68 aa9.8□□□□□ -0.84
TRIM39-205ENST00000396551 ASB16-AS1Q495Z4 193 aa9.8□□□□□ -0.84
TRIM39-205ENST00000396551 KTN1-AS1Q86SY8 53 aa9.78□□□□□ -0.84
TRIM39-205ENST00000396551 TRAV22A0A0B4J277 110 aa9.78□□□□□ -0.84
TRIM39-205ENST00000396551 C8orf17Q9NRJ1 99 aa9.78□□□□□ -0.84
TRIM39-205ENST00000396551 C8orf87E5RJ46 101 aa9.78□□□□□ -0.84
TRIM39-205ENST00000396551 KRTAP10-1P60331 282 aa9.78□□□□□ -0.84
TRIM39-205ENST00000396551 LRP1BQ9NZR2 4599 aa9.77□□□□□ -0.85
TRIM39-205ENST00000396551 Q6ZSA8 131 aa9.77□□□□□ -0.85
TRIM39-205ENST00000396551 A0A1B0GVX0 72 aa9.76□□□□□ -0.85
TRIM39-205ENST00000396551 IGHV6-1A0A0B4J1U7 121 aa9.75□□□□□ -0.85
TRIM39-205ENST00000396551 H3BPC8 53 aa9.73□□□□□ -0.85
TRIM39-205ENST00000396551 PRR4Q16378 134 aa9.73□□□□□ -0.85
TRIM39-205ENST00000396551 A0A087X002 238 aa9.72□□□□□ -0.85
TRIM39-205ENST00000396551 NOTCH2NLQ7Z3S9 236 aa9.72□□□□□ -0.85
TRIM39-205ENST00000396551 C1orf64Q8NEQ6 169 aa9.72□□□□□ -0.85
TRIM39-205ENST00000396551 CYP4F30PQ9H0H9 118 aa9.71□□□□□ -0.85
TRIM39-205ENST00000396551 KRTAP21-3Q3LHN1 58 aa9.7□□□□□ -0.86
TRIM39-205ENST00000396551 CDK2AP2O75956 126 aa9.7□□□□□ -0.86
TRIM39-205ENST00000396551 A8MUN3 132 aa9.69□□□□□ -0.86
TRIM39-205ENST00000396551 PRR26Q8N8Z3 221 aa9.69□□□□□ -0.86
TRIM39-205ENST00000396551 SSBP3-AS1Q7Z2R9 100 aa9.69□□□□□ -0.86
TRIM39-205ENST00000396551 SPINK6Q6UWN8 80 aa9.68□□□□□ -0.86
TRIM39-205ENST00000396551 TP53AIP1Q9HCN2 124 aa9.67□□□□□ -0.86
TRIM39-205ENST00000396551 KRTAP13-2Q52LG2 175 aa9.66□□□□□ -0.86
TRIM39-205ENST00000396551 MRPL34Q9BQ48 92 aaKnown RBP9.66□□□□□ -0.86
TRIM39-205ENST00000396551 SPANXA2-OT1Q8N9U9 137 aa9.63□□□□□ -0.87
TRIM39-205ENST00000396551 NDUFS5O43920 106 aa9.63□□□□□ -0.87
TRIM39-205ENST00000396551 VPS13BQ7Z7G8 4022 aa9.62□□□□□ -0.87
TRIM39-205ENST00000396551 SACSQ9NZJ4 4579 aa9.62□□□□□ -0.87
TRIM39-205ENST00000396551 CHKB-CPT1BH3BT56 60 aa9.6□□□□□ -0.87
TRIM39-205ENST00000396551 KRTAP1-4P0C5Y4 121 aa9.6□□□□□ -0.87
TRIM39-205ENST00000396551 Q1T7F1 81 aa9.56□□□□□ -0.88
TRIM39-205ENST00000396551 PCOTHQ58A44 107 aa9.56□□□□□ -0.88
TRIM39-205ENST00000396551 PKHD1P08F94 4074 aa9.54□□□□□ -0.88
TRIM39-205ENST00000396551 IGLV7-46A0A075B6I9 117 aa9.53□□□□□ -0.88
TRIM39-205ENST00000396551 Q5W150 140 aa9.52□□□□□ -0.88
TRIM39-205ENST00000396551 KRTAP13-3Q3SY46 172 aa9.51□□□□□ -0.89
TRIM39-205ENST00000396551 Q5VV11 94 aa9.48□□□□□ -0.89
TRIM39-205ENST00000396551 PRAC1Q96KF2 57 aa9.47□□□□□ -0.89
TRIM39-205ENST00000396551 DYNC1H1Q14204 4646 aaKnown RBP9.47□□□□□ -0.89
TRIM39-205ENST00000396551 LINC00313P59037 77 aa9.46□□□□□ -0.89
TRIM39-205ENST00000396551 A6NED7 52 aa9.46□□□□□ -0.9
TRIM39-205ENST00000396551 PLA2G1BP04054 148 aaKnown RBP9.45□□□□□ -0.9
TRIM39-205ENST00000396551 C7orf65Q6ZTY9 151 aa9.45□□□□□ -0.9
TRIM39-205ENST00000396551 LCA10Q71F78 164 aa9.45□□□□□ -0.9
TRIM39-205ENST00000396551 PRR15LQ9BU68 103 aa9.44□□□□□ -0.9
TRIM39-205ENST00000396551 Q8N9P0 234 aaPredicted RBP9.44□□□□□ -0.9
TRIM39-205ENST00000396551 COA5Q86WW8 74 aa9.43□□□□□ -0.9
TRIM39-205ENST00000396551 A6NN06 94 aa9.43□□□□□ -0.9
TRIM39-205ENST00000396551 LOC101927531A0A1B0GV80 90 aa9.43□□□□□ -0.9
TRIM39-205ENST00000396551 LIMD2Q9BT23 127 aa9.42□□□□□ -0.9
TRIM39-205ENST00000396551 TYMSOSQ8TAI1 123 aa9.41□□□□□ -0.9
TRIM39-205ENST00000396551 KRTAP16-1A8MUX0 517 aa9.41□□□□□ -0.9
TRIM39-205ENST00000396551 ATP11AUNQ6ZP68 121 aa9.39□□□□□ -0.91
TRIM39-205ENST00000396551 A0A1B0GVY2 172 aa9.37□□□□□ -0.91
TRIM39-205ENST00000396551 SMR3BP02814 79 aaPredicted RBP9.36□□□□□ -0.91
TRIM39-205ENST00000396551 APOBP04114 4563 aaKnown RBP9.36□□□□□ -0.91
TRIM39-205ENST00000396551 RETNLBQ9BQ08 111 aa9.35□□□□□ -0.91
TRIM39-205ENST00000396551 SPINK1P00995 79 aa9.34□□□□□ -0.91
TRIM39-205ENST00000396551 FAM229AH3BQW9 127 aa9.34□□□□□ -0.91
TRIM39-205ENST00000396551 HRES1P13985 223 aa9.34□□□□□ -0.91
TRIM39-205ENST00000396551 FAT1Q14517 4588 aa9.32□□□□□ -0.92
TRIM39-205ENST00000396551 ADM2Q7Z4H4 148 aa9.32□□□□□ -0.92
TRIM39-205ENST00000396551 LINC01554Q52M75 96 aa9.31□□□□□ -0.92
TRIM39-205ENST00000396551 RYR2Q92736 4967 aa9.3□□□□□ -0.92
TRIM39-205ENST00000396551 KRTAP10-4P60372 401 aaPredicted RBP9.29□□□□□ -0.92
TRIM39-205ENST00000396551 LINC00304Q8N9R0 145 aa9.29□□□□□ -0.92
TRIM39-205ENST00000396551 IGKV2-30P06310 120 aa9.28□□□□□ -0.92
TRIM39-205ENST00000396551 PKHD1L1Q86WI1 4243 aa9.26□□□□□ -0.93
TRIM39-205ENST00000396551 RPS29P62273 56 aaKnown RBP9.24□□□□□ -0.93
TRIM39-205ENST00000396551 SPAG11AQ6PDA7 123 aa9.21□□□□□ -0.93
TRIM39-205ENST00000396551 KMT2CQ8NEZ4 4911 aaKnown RBP9.2□□□□□ -0.94
TRIM39-205ENST00000396551 DMAC1Q96GE9 116 aa9.2□□□□□ -0.94
TRIM39-205ENST00000396551 LINC01558Q9Y6Z2 57 aa9.18□□□□□ -0.94
TRIM39-205ENST00000396551 ACYP2P14621 99 aa9.18□□□□□ -0.94
TRIM39-205ENST00000396551 CDC42SE1Q9NRR8 79 aa9.17□□□□□ -0.94
TRIM39-205ENST00000396551 IGKV2D-30A0A075B6S6 120 aa9.16□□□□□ -0.94
TRIM39-205ENST00000396551 Q75L30 129 aa9.15□□□□□ -0.94
TRIM39-205ENST00000396551 SPINK7P58062 85 aa9.08□□□□□ -0.96
TRIM39-205ENST00000396551 C9orf92A6NGG3 77 aa9.07□□□□□ -0.96
TRIM39-205ENST00000396551 A0A0A0MQY5 61 aa9.04□□□□□ -0.96
TRIM39-205ENST00000396551 A8MUU9 505 aa9.02□□□□□ -0.97
TRIM39-205ENST00000396551 C20orf166-AS1Q96NR2 134 aa9.01□□□□□ -0.97
TRIM39-205ENST00000396551 HSPG2P98160 4391 aa8.99□□□□□ -0.97
TRIM39-205ENST00000396551 FLG2Q5D862 2391 aaPredicted RBP8.98□□□□□ -0.97
TRIM39-205ENST00000396551 TNXBP22105 4242 aa8.97□□□□□ -0.97
TRIM39-205ENST00000396551 LRP1Q07954 4544 aaKnown RBP8.97□□□□□ -0.97
TRIM39-205ENST00000396551 FAT3Q8TDW7 4589 aa8.95□□□□□ -0.98
TRIM39-205ENST00000396551 RYR3Q15413 4870 aa8.95□□□□□ -0.98
TRIM39-205ENST00000396551 CSAG1Q6PB30 78 aa8.94□□□□□ -0.98
TRIM39-205ENST00000396551 Q8N1X5 172 aa8.94□□□□□ -0.98
TRIM39-205ENST00000396551 Q5VSD8 79 aa8.9□□□□□ -0.98
TRIM39-205ENST00000396551 KRTAP10-8P60410 259 aa8.9□□□□□ -0.99
TRIM39-205ENST00000396551 KRTAP17-1Q9BYP8 105 aa8.87□□□□□ -0.99
TRIM39-205ENST00000396551 RYR1P21817 5038 aa8.87□□□□□ -0.99
TRIM39-205ENST00000396551 A0A1B0GU69 56 aa8.87□□□□□ -0.99
TRIM39-205ENST00000396551 KRTAP3-1Q9BYR8 98 aa8.82□□□□□ -1
TRIM39-205ENST00000396551 KIAA1109Q2LD37 5005 aa8.73□□□□□ -1.01
TRIM39-205ENST00000396551 SPATA8Q6RVD6 105 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms