RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 TMEM256-PLSCR3K7ERE1 68 aa6.89□□□□□ -1.31
SCAF11-203ENST00000395453 DNAL4O96015 105 aa6.89□□□□□ -1.31
SCAF11-203ENST00000395453 LINC00313P59037 77 aa6.89□□□□□ -1.31
SCAF11-203ENST00000395453 KRTAP16-1A8MUX0 517 aa6.88□□□□□ -1.31
SCAF11-203ENST00000395453 K7ERJ3 54 aa6.88□□□□□ -1.31
SCAF11-203ENST00000395453 SIGMAR1Q99720 223 aa6.88□□□□□ -1.31
SCAF11-203ENST00000395453 LINC00472Q9H8W2 130 aa6.88□□□□□ -1.31
SCAF11-203ENST00000395453 IGKV4-1P06312 121 aa6.87□□□□□ -1.31
SCAF11-203ENST00000395453 COX6CP09669 75 aa6.87□□□□□ -1.31
SCAF11-203ENST00000395453 PSMB2P49721 201 aa6.87□□□□□ -1.31
SCAF11-203ENST00000395453 MACF1Q9UPN3 7388 aaKnown RBP6.87□□□□□ -1.31
SCAF11-203ENST00000395453 TRBV20-1A0A075B6N2 111 aa6.86□□□□□ -1.31
SCAF11-203ENST00000395453 UBE2V1Q13404 147 aa6.85□□□□□ -1.31
SCAF11-203ENST00000395453 NOTCH2NLQ7Z3S9 236 aa6.85□□□□□ -1.31
SCAF11-203ENST00000395453 SYNE2Q8WXH0 6885 aaKnown RBP6.84□□□□□ -1.31
SCAF11-203ENST00000395453 A0A1B0GV72 72 aa6.84□□□□□ -1.31
SCAF11-203ENST00000395453 CCKP06307 115 aa6.84□□□□□ -1.31
SCAF11-203ENST00000395453 TRACP01848 142 aa6.82□□□□□ -1.32
SCAF11-203ENST00000395453 DEFB116Q30KQ4 102 aa6.82□□□□□ -1.32
SCAF11-203ENST00000395453 UQCR10Q9UDW1 63 aa6.82□□□□□ -1.32
SCAF11-203ENST00000395453 MPLKIPQ8TAP9 179 aa6.8□□□□□ -1.32
SCAF11-203ENST00000395453 IGHV6-1A0A0B4J1U7 121 aa6.78□□□□□ -1.32
SCAF11-203ENST00000395453 RBM3P98179 157 aaKnown RBP6.78□□□□□ -1.32
SCAF11-203ENST00000395453 HRES1P13985 223 aa6.77□□□□□ -1.32
SCAF11-203ENST00000395453 SCGB1C2P0DMR2 95 aa6.76□□□□□ -1.33
SCAF11-203ENST00000395453 A0A1B0GVX0 72 aa6.75□□□□□ -1.33
SCAF11-203ENST00000395453 C8orf87E5RJ46 101 aa6.75□□□□□ -1.33
SCAF11-203ENST00000395453 BAALC-AS2P0C853 105 aa6.75□□□□□ -1.33
SCAF11-203ENST00000395453 DSCR8Q96T75 97 aa6.75□□□□□ -1.33
SCAF11-203ENST00000395453 MT2AP02795 61 aa6.74□□□□□ -1.33
SCAF11-203ENST00000395453 VPS25Q9BRG1 176 aa6.74□□□□□ -1.33
SCAF11-203ENST00000395453 LINC00846Q9NV44 126 aa6.74□□□□□ -1.33
SCAF11-203ENST00000395453 RBM12B-AS1Q9P1G2 102 aa6.74□□□□□ -1.33
SCAF11-203ENST00000395453 FAM236DA0A1B0GTK5 79 aa6.73□□□□□ -1.33
SCAF11-203ENST00000395453 FAM236CP0DP71 79 aa6.73□□□□□ -1.33
SCAF11-203ENST00000395453 C21orf62-AS1Q17RA5 79 aa6.73□□□□□ -1.33
SCAF11-203ENST00000395453 C9JAW5 83 aa6.72□□□□□ -1.33
SCAF11-203ENST00000395453 Q6ZQT0 140 aa6.72□□□□□ -1.33
SCAF11-203ENST00000395453 J3KT08 172 aa6.71□□□□□ -1.34
SCAF11-203ENST00000395453 TMA7Q9Y2S6 64 aaKnown RBP6.71□□□□□ -1.34
SCAF11-203ENST00000395453 MT1FP04733 61 aa6.68□□□□□ -1.34
SCAF11-203ENST00000395453 ZCCHC13Q8WW36 166 aaKnown RBP6.68□□□□□ -1.34
SCAF11-203ENST00000395453 Q8N9P0 234 aaPredicted RBP6.67□□□□□ -1.34
SCAF11-203ENST00000395453 A0A1B0GW54 56 aa6.66□□□□□ -1.34
SCAF11-203ENST00000395453 KRTAP10-10P60014 251 aa6.66□□□□□ -1.34
SCAF11-203ENST00000395453 LOC110117498A0A087WWA1 95 aa6.65□□□□□ -1.35
SCAF11-203ENST00000395453 JMJD7-PLA2G4BH0Y9G9 81 aa6.65□□□□□ -1.35
SCAF11-203ENST00000395453 ATXN8Q156A1 80 aa6.65□□□□□ -1.35
SCAF11-203ENST00000395453 NDUFB1O75438 58 aa6.64□□□□□ -1.35
SCAF11-203ENST00000395453 SPINK7P58062 85 aa6.64□□□□□ -1.35
SCAF11-203ENST00000395453 KRTAP6-3Q3LI67 103 aa6.64□□□□□ -1.35
SCAF11-203ENST00000395453 M0R143 59 aa6.63□□□□□ -1.35
SCAF11-203ENST00000395453 MTURNQ8N3F0 131 aa6.63□□□□□ -1.35
SCAF11-203ENST00000395453 A8MWP4 228 aa6.62□□□□□ -1.35
SCAF11-203ENST00000395453 PDE6GP18545 87 aa6.62□□□□□ -1.35
SCAF11-203ENST00000395453 KRTAP19-6Q3LI70 58 aa6.62□□□□□ -1.35
SCAF11-203ENST00000395453 NAA38Q9BRA0 125 aaKnown RBP6.62□□□□□ -1.35
SCAF11-203ENST00000395453 C8orf17Q9NRJ1 99 aa6.61□□□□□ -1.35
SCAF11-203ENST00000395453 IGKV3D-7A0A0C4DH55 119 aa6.6□□□□□ -1.35
SCAF11-203ENST00000395453 C14orf132Q9NPU4 83 aa6.57□□□□□ -1.36
SCAF11-203ENST00000395453 Q6ZVQ6 151 aa6.56□□□□□ -1.36
SCAF11-203ENST00000395453 PRR15Q8IV56 129 aa6.56□□□□□ -1.36
SCAF11-203ENST00000395453 NREPQ16612 68 aa6.53□□□□□ -1.36
SCAF11-203ENST00000395453 LYRM7Q5U5X0 104 aa6.53□□□□□ -1.36
SCAF11-203ENST00000395453 SMIM6P0DI80 62 aa6.52□□□□□ -1.37
SCAF11-203ENST00000395453 WFDC13Q8IUB5 93 aa6.52□□□□□ -1.37
SCAF11-203ENST00000395453 MMP24-AS1A0A0U1RRL7 71 aa6.5□□□□□ -1.37
SCAF11-203ENST00000395453 TMEM254Q8TBM7 123 aa6.5□□□□□ -1.37
SCAF11-203ENST00000395453 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
SCAF11-203ENST00000395453 MRPL34Q9BQ48 92 aaKnown RBP6.5□□□□□ -1.37
SCAF11-203ENST00000395453 NEBP20929 6669 aa6.48□□□□□ -1.37
SCAF11-203ENST00000395453 hDV103S1A0JD37 113 aa6.46□□□□□ -1.38
SCAF11-203ENST00000395453 H3BT86 120 aa6.46□□□□□ -1.38
SCAF11-203ENST00000395453 K7EQZ3 153 aa6.46□□□□□ -1.38
SCAF11-203ENST00000395453 TSTD3H0UI37 97 aa6.45□□□□□ -1.38
SCAF11-203ENST00000395453 BATFQ16520 125 aa6.45□□□□□ -1.38
SCAF11-203ENST00000395453 H1FX-AS1Q4G0G2 97 aa6.43□□□□□ -1.38
SCAF11-203ENST00000395453 A0A1W2PPM0 123 aa6.42□□□□□ -1.38
SCAF11-203ENST00000395453 TAX1BP3O14907 124 aa6.42□□□□□ -1.38
SCAF11-203ENST00000395453 BPY2O14599 106 aa6.4□□□□□ -1.39
SCAF11-203ENST00000395453 NDUFS5O43920 106 aa6.4□□□□□ -1.39
SCAF11-203ENST00000395453 Q5W150 140 aa6.4□□□□□ -1.39
SCAF11-203ENST00000395453 KRTAP20-1Q3LI63 56 aa6.39□□□□□ -1.39
SCAF11-203ENST00000395453 MUC12Q9UKN1 5478 aa6.36□□□□□ -1.39
SCAF11-203ENST00000395453 IGKV2D-30A0A075B6S6 120 aa6.35□□□□□ -1.39
SCAF11-203ENST00000395453 IGKV2-30P06310 120 aa6.35□□□□□ -1.39
SCAF11-203ENST00000395453 C7orf65Q6ZTY9 151 aa6.35□□□□□ -1.39
SCAF11-203ENST00000395453 LOC105371267A0A1B0GV96 52 aa6.33□□□□□ -1.4
SCAF11-203ENST00000395453 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
SCAF11-203ENST00000395453 Q8N9L7 120 aa6.33□□□□□ -1.4
SCAF11-203ENST00000395453 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
SCAF11-203ENST00000395453 HCG22E2RYF7 251 aa6.3□□□□□ -1.4
SCAF11-203ENST00000395453 CXCL6P80162 114 aa6.29□□□□□ -1.4
SCAF11-203ENST00000395453 SPCS1Q9Y6A9 102 aa6.29□□□□□ -1.4
SCAF11-203ENST00000395453 C4orf26Q17RF5 130 aa6.27□□□□□ -1.41
SCAF11-203ENST00000395453 PRO0461Q9UI25 63 aa6.25□□□□□ -1.41
SCAF11-203ENST00000395453 UBL5Q9BZL1 73 aa6.24□□□□□ -1.41
SCAF11-203ENST00000395453 COL5A1-AS1Q5SY13 56 aa6.2□□□□□ -1.42
SCAF11-203ENST00000395453 K7EP34 96 aa6.18□□□□□ -1.42
SCAF11-203ENST00000395453 C5orf47Q569G3 176 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms