RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 Q5XG85 94 aa4.88□□□□□ -1.63
HERC4-203ENST00000395185 TRBV7-7A0A0K0K1E9 115 aa4.87□□□□□ -1.63
HERC4-203ENST00000395185 C9orf153Q5TBE3 101 aa4.87□□□□□ -1.63
HERC4-203ENST00000395185 ACYP1P07311 99 aa4.86□□□□□ -1.63
HERC4-203ENST00000395185 RPS29P62273 56 aaKnown RBP4.86□□□□□ -1.63
HERC4-203ENST00000395185 SPINK1P00995 79 aa4.85□□□□□ -1.63
HERC4-203ENST00000395185 ASB16-AS1Q495Z4 193 aa4.85□□□□□ -1.63
HERC4-203ENST00000395185 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.63
HERC4-203ENST00000395185 J3QR89 54 aa4.84□□□□□ -1.63
HERC4-203ENST00000395185 LINC00846Q9NV44 126 aa4.84□□□□□ -1.63
HERC4-203ENST00000395185 K7ERU9 68 aa4.83□□□□□ -1.64
HERC4-203ENST00000395185 A0A087WSZ3 146 aa4.82□□□□□ -1.64
HERC4-203ENST00000395185 LINC00472Q9H8W2 130 aa4.82□□□□□ -1.64
HERC4-203ENST00000395185 RNF213Q63HN8 5207 aa4.81□□□□□ -1.64
HERC4-203ENST00000395185 IGLV7-46A0A075B6I9 117 aa4.81□□□□□ -1.64
HERC4-203ENST00000395185 Q96NJ1 140 aa4.81□□□□□ -1.64
HERC4-203ENST00000395185 HRCT1Q6UXD1 115 aa4.8□□□□□ -1.64
HERC4-203ENST00000395185 VPS25Q9BRG1 176 aa4.8□□□□□ -1.64
HERC4-203ENST00000395185 Q6ZVQ6 151 aa4.79□□□□□ -1.64
HERC4-203ENST00000395185 FP248Q71RG6 208 aaPredicted RBP4.79□□□□□ -1.64
HERC4-203ENST00000395185 RETNLBQ9BQ08 111 aa4.79□□□□□ -1.64
HERC4-203ENST00000395185 C1orf195Q5TG92 126 aa4.78□□□□□ -1.64
HERC4-203ENST00000395185 SS18L2Q9UHA2 77 aa4.78□□□□□ -1.64
HERC4-203ENST00000395185 NREPQ16612 68 aa4.77□□□□□ -1.65
HERC4-203ENST00000395185 LINC00643Q86TS7 51 aa4.77□□□□□ -1.65
HERC4-203ENST00000395185 UBL5Q9BZL1 73 aa4.77□□□□□ -1.65
HERC4-203ENST00000395185 LIMD2Q9BT23 127 aa4.76□□□□□ -1.65
HERC4-203ENST00000395185 LRP2P98164 4655 aa4.75□□□□□ -1.65
HERC4-203ENST00000395185 DSCR10P59022 87 aa4.75□□□□□ -1.65
HERC4-203ENST00000395185 TPRXLQ17RH7 258 aa4.75□□□□□ -1.65
HERC4-203ENST00000395185 MUC2Q02817 5179 aa4.74□□□□□ -1.65
HERC4-203ENST00000395185 J3KT08 172 aa4.74□□□□□ -1.65
HERC4-203ENST00000395185 CXCL6P80162 114 aa4.74□□□□□ -1.65
HERC4-203ENST00000395185 ATP5EP2Q5VTU8 51 aa4.72□□□□□ -1.65
HERC4-203ENST00000395185 SIGMAR1Q99720 223 aa4.72□□□□□ -1.65
HERC4-203ENST00000395185 A8MWP4 228 aa4.71□□□□□ -1.66
HERC4-203ENST00000395185 BPY2O14599 106 aa4.71□□□□□ -1.66
HERC4-203ENST00000395185 DEFB116Q30KQ4 102 aa4.71□□□□□ -1.66
HERC4-203ENST00000395185 IGKV3D-7A0A0C4DH55 119 aa4.7□□□□□ -1.66
HERC4-203ENST00000395185 IGKV4-1P06312 121 aa4.7□□□□□ -1.66
HERC4-203ENST00000395185 PRR15Q8IV56 129 aa4.7□□□□□ -1.66
HERC4-203ENST00000395185 LPAP08519 4548 aa4.69□□□□□ -1.66
HERC4-203ENST00000395185 A0A0U1RQV1 116 aa4.69□□□□□ -1.66
HERC4-203ENST00000395185 MT-ATP8P03928 68 aa4.69□□□□□ -1.66
HERC4-203ENST00000395185 IMUPQ9GZP8 106 aa4.69□□□□□ -1.66
HERC4-203ENST00000395185 A0A1B0GVX0 72 aa4.67□□□□□ -1.66
HERC4-203ENST00000395185 K7EQZ3 153 aa4.66□□□□□ -1.66
HERC4-203ENST00000395185 SEC61BP60468 96 aaKnown RBP4.66□□□□□ -1.66
HERC4-203ENST00000395185 KRTAP13-3Q3SY46 172 aa4.66□□□□□ -1.66
HERC4-203ENST00000395185 NOTCH2NLQ7Z3S9 236 aa4.66□□□□□ -1.66
HERC4-203ENST00000395185 Q8N9L7 120 aa4.66□□□□□ -1.66
HERC4-203ENST00000395185 NDUFB1O75438 58 aa4.65□□□□□ -1.67
HERC4-203ENST00000395185 KRTAP16-1A8MUX0 517 aa4.64□□□□□ -1.67
HERC4-203ENST00000395185 MMP24-AS1A0A0U1RRL7 71 aa4.63□□□□□ -1.67
HERC4-203ENST00000395185 C8orf87E5RJ46 101 aa4.63□□□□□ -1.67
HERC4-203ENST00000395185 C8orf17Q9NRJ1 99 aa4.63□□□□□ -1.67
HERC4-203ENST00000395185 FAT4Q6V0I7 4981 aa4.63□□□□□ -1.67
HERC4-203ENST00000395185 IGHV6-1A0A0B4J1U7 121 aa4.61□□□□□ -1.67
HERC4-203ENST00000395185 LINC00313P59037 77 aa4.61□□□□□ -1.67
HERC4-203ENST00000395185 HIST1H4AP62805 103 aaKnown RBP4.61□□□□□ -1.67
HERC4-203ENST00000395185 A0A087WVE0 104 aa4.6□□□□□ -1.67
HERC4-203ENST00000395185 HCG22E2RYF7 251 aa4.6□□□□□ -1.67
HERC4-203ENST00000395185 Q8N9P0 234 aaPredicted RBP4.6□□□□□ -1.67
HERC4-203ENST00000395185 C9orf92A6NGG3 77 aa4.59□□□□□ -1.67
HERC4-203ENST00000395185 TMEM254Q8TBM7 123 aa4.59□□□□□ -1.67
HERC4-203ENST00000395185 C20orf166-AS1Q96NR2 134 aa4.58□□□□□ -1.68
HERC4-203ENST00000395185 hDV103S1A0JD37 113 aa4.57□□□□□ -1.68
HERC4-203ENST00000395185 A8MUU9 505 aa4.57□□□□□ -1.68
HERC4-203ENST00000395185 CASC2Q6XLA1 102 aa4.57□□□□□ -1.68
HERC4-203ENST00000395185 MRPL34Q9BQ48 92 aaKnown RBP4.56□□□□□ -1.68
HERC4-203ENST00000395185 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
HERC4-203ENST00000395185 WFDC13Q8IUB5 93 aa4.55□□□□□ -1.68
HERC4-203ENST00000395185 Q75L30 129 aa4.54□□□□□ -1.68
HERC4-203ENST00000395185 OCR1Q9BZK8 76 aa4.54□□□□□ -1.68
HERC4-203ENST00000395185 MUC17Q685J3 4493 aa4.53□□□□□ -1.68
HERC4-203ENST00000395185 SCGB1A1P11684 91 aa4.53□□□□□ -1.68
HERC4-203ENST00000395185 PCOTHQ58A44 107 aa4.53□□□□□ -1.68
HERC4-203ENST00000395185 FAM236AA0A1B0GUQ0 79 aa4.52□□□□□ -1.69
HERC4-203ENST00000395185 FAM236BA0A1B0GV22 79 aa4.52□□□□□ -1.69
HERC4-203ENST00000395185 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
HERC4-203ENST00000395185 FSIP2Q5CZC0 6907 aa4.51□□□□□ -1.69
HERC4-203ENST00000395185 RPL37P61927 97 aaKnown RBP4.51□□□□□ -1.69
HERC4-203ENST00000395185 ATP11AUNQ6ZP68 121 aa4.51□□□□□ -1.69
HERC4-203ENST00000395185 TP53AIP1Q9HCN2 124 aa4.51□□□□□ -1.69
HERC4-203ENST00000395185 UQCRQO14949 82 aa4.49□□□□□ -1.69
HERC4-203ENST00000395185 Q5W150 140 aa4.49□□□□□ -1.69
HERC4-203ENST00000395185 ATOX1O00244 68 aa4.48□□□□□ -1.69
HERC4-203ENST00000395185 SMIM20Q8N5G0 67 aa4.48□□□□□ -1.69
HERC4-203ENST00000395185 TRAV7A0A075B6U4 112 aa4.47□□□□□ -1.69
HERC4-203ENST00000395185 ZCCHC13Q8WW36 166 aaKnown RBP4.47□□□□□ -1.69
HERC4-203ENST00000395185 C5orf47Q569G3 176 aa4.45□□□□□ -1.7
HERC4-203ENST00000395185 SERP2Q8N6R1 65 aa4.45□□□□□ -1.7
HERC4-203ENST00000395185 KRTAP4-1Q9BYQ7 146 aa4.45□□□□□ -1.7
HERC4-203ENST00000395185 NDUFS5O43920 106 aa4.43□□□□□ -1.7
HERC4-203ENST00000395185 TRAV22A0A0B4J277 110 aa4.42□□□□□ -1.7
HERC4-203ENST00000395185 H3BPC8 53 aa4.41□□□□□ -1.7
HERC4-203ENST00000395185 COX7CP15954 63 aa4.41□□□□□ -1.7
HERC4-203ENST00000395185 COX6B2Q6YFQ2 88 aa4.41□□□□□ -1.7
HERC4-203ENST00000395185 H0Y9P7 68 aa4.39□□□□□ -1.71
HERC4-203ENST00000395185 IGKV2-30P06310 120 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms