RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 TP53AIP1Q9HCN2 124 aa10.9□□□□□ -0.67
SIL1-202ENST00000394817 DYNC1H1Q14204 4646 aaKnown RBP10.89□□□□□ -0.67
SIL1-202ENST00000394817 FAM229BQ4G0N7 80 aa10.88□□□□□ -0.67
SIL1-202ENST00000394817 CYP4F30PQ9H0H9 118 aa10.88□□□□□ -0.67
SIL1-202ENST00000394817 A0A087X002 238 aa10.87□□□□□ -0.67
SIL1-202ENST00000394817 A0A1B0GVY2 172 aa10.87□□□□□ -0.67
SIL1-202ENST00000394817 FP248Q71RG6 208 aaPredicted RBP10.87□□□□□ -0.67
SIL1-202ENST00000394817 SVIPQ8NHG7 77 aa10.87□□□□□ -0.67
SIL1-202ENST00000394817 C4orf26Q17RF5 130 aa10.86□□□□□ -0.67
SIL1-202ENST00000394817 KRTAP13-2Q52LG2 175 aa10.86□□□□□ -0.67
SIL1-202ENST00000394817 C1orf64Q8NEQ6 169 aa10.86□□□□□ -0.67
SIL1-202ENST00000394817 MRPL34Q9BQ48 92 aaKnown RBP10.85□□□□□ -0.67
SIL1-202ENST00000394817 VPS13BQ7Z7G8 4022 aa10.85□□□□□ -0.67
SIL1-202ENST00000394817 SPINK6Q6UWN8 80 aa10.84□□□□□ -0.67
SIL1-202ENST00000394817 NOTCH2NLQ7Z3S9 236 aa10.84□□□□□ -0.67
SIL1-202ENST00000394817 SPANXA2-OT1Q8N9U9 137 aa10.82□□□□□ -0.68
SIL1-202ENST00000394817 KRTAP1-4P0C5Y4 121 aa10.81□□□□□ -0.68
SIL1-202ENST00000394817 NDUFS5O43920 106 aa10.79□□□□□ -0.68
SIL1-202ENST00000394817 PRR4Q16378 134 aa10.78□□□□□ -0.68
SIL1-202ENST00000394817 RYR3Q15413 4870 aa10.76□□□□□ -0.69
SIL1-202ENST00000394817 APOBP04114 4563 aaKnown RBP10.76□□□□□ -0.69
SIL1-202ENST00000394817 C8orf87E5RJ46 101 aa10.75□□□□□ -0.69
SIL1-202ENST00000394817 C1orf195Q5TG92 126 aa10.71□□□□□ -0.69
SIL1-202ENST00000394817 LIMD2Q9BT23 127 aa10.69□□□□□ -0.7
SIL1-202ENST00000394817 SMR3BP02814 79 aaPredicted RBP10.68□□□□□ -0.7
SIL1-202ENST00000394817 IGLV7-46A0A075B6I9 117 aa10.67□□□□□ -0.7
SIL1-202ENST00000394817 PLA2G1BP04054 148 aaKnown RBP10.67□□□□□ -0.7
SIL1-202ENST00000394817 MPLKIPQ8TAP9 179 aa10.66□□□□□ -0.7
SIL1-202ENST00000394817 KRTAP13-3Q3SY46 172 aa10.66□□□□□ -0.7
SIL1-202ENST00000394817 PCOTHQ58A44 107 aa10.65□□□□□ -0.7
SIL1-202ENST00000394817 LINC00313P59037 77 aa10.64□□□□□ -0.71
SIL1-202ENST00000394817 TYMSOSQ8TAI1 123 aa10.63□□□□□ -0.71
SIL1-202ENST00000394817 Q5W150 140 aa10.62□□□□□ -0.71
SIL1-202ENST00000394817 FAT1Q14517 4588 aa10.62□□□□□ -0.71
SIL1-202ENST00000394817 LOC101927531A0A1B0GV80 90 aa10.61□□□□□ -0.71
SIL1-202ENST00000394817 Q1T7F1 81 aa10.6□□□□□ -0.71
SIL1-202ENST00000394817 C4orf48Q5BLP8 95 aa10.6□□□□□ -0.71
SIL1-202ENST00000394817 Q8N9P0 234 aaPredicted RBP10.6□□□□□ -0.71
SIL1-202ENST00000394817 SPINK1P00995 79 aa10.59□□□□□ -0.71
SIL1-202ENST00000394817 KRTAP16-1A8MUX0 517 aa10.56□□□□□ -0.72
SIL1-202ENST00000394817 KRTAP10-4P60372 401 aaPredicted RBP10.54□□□□□ -0.72
SIL1-202ENST00000394817 FAM229AH3BQW9 127 aa10.53□□□□□ -0.72
SIL1-202ENST00000394817 COA5Q86WW8 74 aa10.53□□□□□ -0.72
SIL1-202ENST00000394817 RPS29P62273 56 aaKnown RBP10.52□□□□□ -0.72
SIL1-202ENST00000394817 PRR26Q8N8Z3 221 aa10.52□□□□□ -0.73
SIL1-202ENST00000394817 LINC00304Q8N9R0 145 aa10.5□□□□□ -0.73
SIL1-202ENST00000394817 V9GYY9 64 aa10.48□□□□□ -0.73
SIL1-202ENST00000394817 SPAG11AQ6PDA7 123 aa10.48□□□□□ -0.73
SIL1-202ENST00000394817 HSPG2P98160 4391 aa10.46□□□□□ -0.73
SIL1-202ENST00000394817 PKHD1L1Q86WI1 4243 aa10.45□□□□□ -0.74
SIL1-202ENST00000394817 RYR1P21817 5038 aa10.42□□□□□ -0.74
SIL1-202ENST00000394817 IGKV2-30P06310 120 aa10.41□□□□□ -0.74
SIL1-202ENST00000394817 HRES1P13985 223 aa10.41□□□□□ -0.74
SIL1-202ENST00000394817 RETNLBQ9BQ08 111 aa10.41□□□□□ -0.74
SIL1-202ENST00000394817 PRO0628Q9UI54 55 aa10.4□□□□□ -0.74
SIL1-202ENST00000394817 PSPHP1O15172 72 aa10.39□□□□□ -0.75
SIL1-202ENST00000394817 EPPK1P58107 5090 aaKnown RBP10.38□□□□□ -0.75
SIL1-202ENST00000394817 BRK1Q8WUW1 75 aa10.37□□□□□ -0.75
SIL1-202ENST00000394817 A8MUN3 132 aa10.35□□□□□ -0.75
SIL1-202ENST00000394817 Q5VSD8 79 aa10.33□□□□□ -0.76
SIL1-202ENST00000394817 DMAC1Q96GE9 116 aa10.33□□□□□ -0.76
SIL1-202ENST00000394817 KRTAP17-1Q9BYP8 105 aa10.33□□□□□ -0.76
SIL1-202ENST00000394817 KIAA1109Q2LD37 5005 aa10.32□□□□□ -0.76
SIL1-202ENST00000394817 Q5VV11 94 aa10.31□□□□□ -0.76
SIL1-202ENST00000394817 ACYP2P14621 99 aa10.31□□□□□ -0.76
SIL1-202ENST00000394817 PRR15LQ9BU68 103 aa10.27□□□□□ -0.76
SIL1-202ENST00000394817 IGKV2D-30A0A075B6S6 120 aa10.26□□□□□ -0.77
SIL1-202ENST00000394817 LINC01558Q9Y6Z2 57 aa10.25□□□□□ -0.77
SIL1-202ENST00000394817 LRP1Q07954 4544 aaKnown RBP10.23□□□□□ -0.77
SIL1-202ENST00000394817 Q75L30 129 aa10.21□□□□□ -0.77
SIL1-202ENST00000394817 TNXBP22105 4242 aa10.19□□□□□ -0.78
SIL1-202ENST00000394817 C20orf166-AS1Q96NR2 134 aa10.19□□□□□ -0.78
SIL1-202ENST00000394817 C7orf65Q6ZTY9 151 aa10.18□□□□□ -0.78
SIL1-202ENST00000394817 A8MUU9 505 aa10.17□□□□□ -0.78
SIL1-202ENST00000394817 CHKB-CPT1BH3BT56 60 aa10.17□□□□□ -0.78
SIL1-202ENST00000394817 C9orf92A6NGG3 77 aa10.16□□□□□ -0.78
SIL1-202ENST00000394817 FAT3Q8TDW7 4589 aa10.15□□□□□ -0.78
SIL1-202ENST00000394817 FLG2Q5D862 2391 aaPredicted RBP10.14□□□□□ -0.79
SIL1-202ENST00000394817 Q8N1X5 172 aa10.12□□□□□ -0.79
SIL1-202ENST00000394817 KRTAP10-8P60410 259 aa10.09□□□□□ -0.79
SIL1-202ENST00000394817 MYCBP2O75592 4640 aa10.07□□□□□ -0.8
SIL1-202ENST00000394817 A6NED7 52 aa10.05□□□□□ -0.8
SIL1-202ENST00000394817 A8MU10 97 aa10.03□□□□□ -0.8
SIL1-202ENST00000394817 LCA10Q71F78 164 aa9.99□□□□□ -0.81
SIL1-202ENST00000394817 KRTAP4-5Q9BYR2 181 aa9.97□□□□□ -0.81
SIL1-202ENST00000394817 CDC42SE1Q9NRR8 79 aa9.97□□□□□ -0.81
SIL1-202ENST00000394817 SPINK7P58062 85 aa9.96□□□□□ -0.81
SIL1-202ENST00000394817 MT1HL1P0DM35 61 aa9.95□□□□□ -0.82
SIL1-202ENST00000394817 DMBT1Q9UGM3 2413 aaPredicted RBP9.93□□□□□ -0.82
SIL1-202ENST00000394817 A0A1B0GU69 56 aa9.92□□□□□ -0.82
SIL1-202ENST00000394817 BIRC6Q9NR09 4857 aa9.88□□□□□ -0.83
SIL1-202ENST00000394817 ATP11AUNQ6ZP68 121 aa9.87□□□□□ -0.83
SIL1-202ENST00000394817 ABCA13Q86UQ4 5058 aa9.86□□□□□ -0.83
SIL1-202ENST00000394817 KRTAP3-1Q9BYR8 98 aa9.84□□□□□ -0.83
SIL1-202ENST00000394817 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
SIL1-202ENST00000394817 HERC2O95714 4834 aa9.8□□□□□ -0.84
SIL1-202ENST00000394817 RPL37P61927 97 aaKnown RBP9.8□□□□□ -0.84
SIL1-202ENST00000394817 PMAIP1Q13794 54 aa9.79□□□□□ -0.84
SIL1-202ENST00000394817 XP32Q5T750 250 aa9.76□□□□□ -0.85
SIL1-202ENST00000394817 COX6B2Q6YFQ2 88 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms