RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 TMEM258P61165 79 aa13.27□□□□□ -0.29
CNN3-202ENST00000394202 CYSTM1Q9H1C7 97 aa13.27□□□□□ -0.29
CNN3-202ENST00000394202 PCLOQ9Y6V0 5065 aa13.25□□□□□ -0.29
CNN3-202ENST00000394202 RPS29P62273 56 aaKnown RBP13.24□□□□□ -0.29
CNN3-202ENST00000394202 LIMD2Q9BT23 127 aa13.24□□□□□ -0.29
CNN3-202ENST00000394202 ASB16-AS1Q495Z4 193 aa13.21□□□□□ -0.29
CNN3-202ENST00000394202 C1orf195Q5TG92 126 aa13.21□□□□□ -0.29
CNN3-202ENST00000394202 BPY2O14599 106 aa13.18□□□□□ -0.3
CNN3-202ENST00000394202 RPS28P62857 69 aaKnown RBP13.17□□□□□ -0.3
CNN3-202ENST00000394202 RETNLBQ9BQ08 111 aa13.17□□□□□ -0.3
CNN3-202ENST00000394202 IGKV4-1P06312 121 aa13.16□□□□□ -0.3
CNN3-202ENST00000394202 DSCR10P59022 87 aa13.16□□□□□ -0.3
CNN3-202ENST00000394202 C20orf197Q8N268 126 aa13.16□□□□□ -0.3
CNN3-202ENST00000394202 J3KT08 172 aa13.15□□□□□ -0.3
CNN3-202ENST00000394202 Q8N9L7 120 aa13.14□□□□□ -0.31
CNN3-202ENST00000394202 J3QL48 77 aa13.13□□□□□ -0.31
CNN3-202ENST00000394202 KLKP1Q107X0 134 aa13.11□□□□□ -0.31
CNN3-202ENST00000394202 K7EQZ3 153 aa13.07□□□□□ -0.32
CNN3-202ENST00000394202 A8MWP4 228 aa13.04□□□□□ -0.32
CNN3-202ENST00000394202 H7BZZ5 65 aa13.02□□□□□ -0.32
CNN3-202ENST00000394202 PRR15Q8IV56 129 aa13□□□□□ -0.33
CNN3-202ENST00000394202 NDUFC1O43677 76 aa12.99□□□□□ -0.33
CNN3-202ENST00000394202 IGHV6-1A0A0B4J1U7 121 aa12.98□□□□□ -0.33
CNN3-202ENST00000394202 OCR1Q9BZK8 76 aa12.98□□□□□ -0.33
CNN3-202ENST00000394202 FAM236DA0A1B0GTK5 79 aa12.98□□□□□ -0.33
CNN3-202ENST00000394202 FAM236CP0DP71 79 aa12.98□□□□□ -0.33
CNN3-202ENST00000394202 NOTCH2NLQ7Z3S9 236 aa12.98□□□□□ -0.33
CNN3-202ENST00000394202 A0A1B0GVX0 72 aa12.97□□□□□ -0.33
CNN3-202ENST00000394202 SNURFQ9Y675 71 aa12.97□□□□□ -0.33
CNN3-202ENST00000394202 NDUFB1O75438 58 aa12.96□□□□□ -0.33
CNN3-202ENST00000394202 TMEM254Q8TBM7 123 aa12.94□□□□□ -0.34
CNN3-202ENST00000394202 SVIPQ8NHG7 77 aa12.92□□□□□ -0.34
CNN3-202ENST00000394202 HERC1Q15751 4861 aa12.9□□□□□ -0.34
CNN3-202ENST00000394202 PRR4Q16378 134 aa12.88□□□□□ -0.35
CNN3-202ENST00000394202 FP248Q71RG6 208 aaPredicted RBP12.87□□□□□ -0.35
CNN3-202ENST00000394202 C8orf17Q9NRJ1 99 aa12.87□□□□□ -0.35
CNN3-202ENST00000394202 IGLV7-46A0A075B6I9 117 aa12.87□□□□□ -0.35
CNN3-202ENST00000394202 MMP24-AS1A0A0U1RRL7 71 aa12.87□□□□□ -0.35
CNN3-202ENST00000394202 A0A0U1RQV1 116 aa12.86□□□□□ -0.35
CNN3-202ENST00000394202 ATP5EP56381 51 aaPredicted RBP12.86□□□□□ -0.35
CNN3-202ENST00000394202 SERP1Q9Y6X1 66 aa12.86□□□□□ -0.35
CNN3-202ENST00000394202 C9orf92A6NGG3 77 aa12.84□□□□□ -0.35
CNN3-202ENST00000394202 LINC00313P59037 77 aa12.83□□□□□ -0.35
CNN3-202ENST00000394202 WFDC13Q8IUB5 93 aa12.83□□□□□ -0.35
CNN3-202ENST00000394202 HCG22E2RYF7 251 aa12.82□□□□□ -0.36
CNN3-202ENST00000394202 C8orf87E5RJ46 101 aa12.78□□□□□ -0.36
CNN3-202ENST00000394202 hDV103S1A0JD37 113 aa12.78□□□□□ -0.36
CNN3-202ENST00000394202 CASC2Q6XLA1 102 aa12.78□□□□□ -0.36
CNN3-202ENST00000394202 KRTAP16-1A8MUX0 517 aa12.76□□□□□ -0.37
CNN3-202ENST00000394202 LPAP08519 4548 aa12.76□□□□□ -0.37
CNN3-202ENST00000394202 KRTAP13-3Q3SY46 172 aa12.76□□□□□ -0.37
CNN3-202ENST00000394202 C5orf47Q569G3 176 aa12.7□□□□□ -0.38
CNN3-202ENST00000394202 MRPL34Q9BQ48 92 aaKnown RBP12.69□□□□□ -0.38
CNN3-202ENST00000394202 TPRXLQ17RH7 258 aa12.65□□□□□ -0.38
CNN3-202ENST00000394202 ZCCHC13Q8WW36 166 aaKnown RBP12.65□□□□□ -0.38
CNN3-202ENST00000394202 SMIM26A0A096LP01 95 aa12.63□□□□□ -0.39
CNN3-202ENST00000394202 Q8N9P0 234 aaPredicted RBP12.62□□□□□ -0.39
CNN3-202ENST00000394202 XP32Q5T750 250 aa12.61□□□□□ -0.39
CNN3-202ENST00000394202 HMCN2Q8NDA2 5059 aa12.6□□□□□ -0.39
CNN3-202ENST00000394202 LRP2P98164 4655 aa12.6□□□□□ -0.39
CNN3-202ENST00000394202 NDUFS5O43920 106 aa12.6□□□□□ -0.39
CNN3-202ENST00000394202 C4orf26Q17RF5 130 aa12.58□□□□□ -0.4
CNN3-202ENST00000394202 C20orf166-AS1Q96NR2 134 aa12.58□□□□□ -0.4
CNN3-202ENST00000394202 A8MUU9 505 aa12.56□□□□□ -0.4
CNN3-202ENST00000394202 MP68P56378 58 aa12.55□□□□□ -0.4
CNN3-202ENST00000394202 H3BPC8 53 aa12.5□□□□□ -0.41
CNN3-202ENST00000394202 Q75L30 129 aa12.5□□□□□ -0.41
CNN3-202ENST00000394202 Q5W150 140 aa12.48□□□□□ -0.41
CNN3-202ENST00000394202 RPL37P61927 97 aaKnown RBP12.45□□□□□ -0.42
CNN3-202ENST00000394202 TRAV22A0A0B4J277 110 aa12.44□□□□□ -0.42
CNN3-202ENST00000394202 TP53AIP1Q9HCN2 124 aa12.44□□□□□ -0.42
CNN3-202ENST00000394202 H0Y9P7 68 aa12.43□□□□□ -0.42
CNN3-202ENST00000394202 CYP4F30PQ9H0H9 118 aa12.43□□□□□ -0.42
CNN3-202ENST00000394202 LINC00208Q96KT6 92 aa12.43□□□□□ -0.42
CNN3-202ENST00000394202 C1orf64Q8NEQ6 169 aa12.37□□□□□ -0.43
CNN3-202ENST00000394202 SPANXA2-OT1Q8N9U9 137 aa12.34□□□□□ -0.43
CNN3-202ENST00000394202 ATP11AUNQ6ZP68 121 aa12.34□□□□□ -0.43
CNN3-202ENST00000394202 PCOTHQ58A44 107 aa12.32□□□□□ -0.44
CNN3-202ENST00000394202 MPLKIPQ8TAP9 179 aa12.27□□□□□ -0.44
CNN3-202ENST00000394202 Q1T7F1 81 aa12.21□□□□□ -0.45
CNN3-202ENST00000394202 SEC61BP60468 96 aaKnown RBP12.19□□□□□ -0.46
CNN3-202ENST00000394202 MUC17Q685J3 4493 aa12.19□□□□□ -0.46
CNN3-202ENST00000394202 IGKV2D-30A0A075B6S6 120 aa12.18□□□□□ -0.46
CNN3-202ENST00000394202 IGKV2-30P06310 120 aa12.18□□□□□ -0.46
CNN3-202ENST00000394202 UBR4Q5T4S7 5183 aa12.15□□□□□ -0.46
CNN3-202ENST00000394202 PRO0628Q9UI54 55 aa12.14□□□□□ -0.47
CNN3-202ENST00000394202 SPINK7P58062 85 aa12.14□□□□□ -0.47
CNN3-202ENST00000394202 KRTAP4-1Q9BYQ7 146 aa12.12□□□□□ -0.47
CNN3-202ENST00000394202 LOC101927531A0A1B0GV80 90 aa12.11□□□□□ -0.47
CNN3-202ENST00000394202 MUC2Q02817 5179 aa12.11□□□□□ -0.47
CNN3-202ENST00000394202 V9GYY9 64 aa12.1□□□□□ -0.47
CNN3-202ENST00000394202 C7orf65Q6ZTY9 151 aa12.08□□□□□ -0.48
CNN3-202ENST00000394202 BRK1Q8WUW1 75 aa12.02□□□□□ -0.49
CNN3-202ENST00000394202 COA5Q86WW8 74 aa11.99□□□□□ -0.49
CNN3-202ENST00000394202 PSPHP1O15172 72 aa11.94□□□□□ -0.5
CNN3-202ENST00000394202 HRES1P13985 223 aa11.94□□□□□ -0.5
CNN3-202ENST00000394202 RNF213Q63HN8 5207 aa11.94□□□□□ -0.5
CNN3-202ENST00000394202 A8MUN3 132 aa11.88□□□□□ -0.51
CNN3-202ENST00000394202 Q5VV11 94 aa11.84□□□□□ -0.51
CNN3-202ENST00000394202 PRR15LQ9BU68 103 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms