RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 FAM229AH3BQW9 127 aa10.9□□□□□ -0.66
CLDND1-203ENST00000394181 C8orf17Q9NRJ1 99 aa10.9□□□□□ -0.66
CLDND1-203ENST00000394181 SNURFQ9Y675 71 aa10.9□□□□□ -0.66
CLDND1-203ENST00000394181 C4orf48Q5BLP8 95 aa10.9□□□□□ -0.66
CLDND1-203ENST00000394181 Q5XG85 94 aa10.9□□□□□ -0.66
CLDND1-203ENST00000394181 LRP1Q07954 4544 aaKnown RBP10.89□□□□□ -0.67
CLDND1-203ENST00000394181 Q5VSD8 79 aa10.89□□□□□ -0.67
CLDND1-203ENST00000394181 hDV103S1A0JD37 113 aa10.88□□□□□ -0.67
CLDND1-203ENST00000394181 LINC00304Q8N9R0 145 aa10.87□□□□□ -0.67
CLDND1-203ENST00000394181 SPINK1P00995 79 aa10.85□□□□□ -0.67
CLDND1-203ENST00000394181 TMEM254Q8TBM7 123 aa10.84□□□□□ -0.67
CLDND1-203ENST00000394181 LIMD2Q9BT23 127 aa10.83□□□□□ -0.68
CLDND1-203ENST00000394181 KLKP1Q107X0 134 aa10.81□□□□□ -0.68
CLDND1-203ENST00000394181 TNXBP22105 4242 aa10.79□□□□□ -0.68
CLDND1-203ENST00000394181 A0A0U1RQV1 116 aa10.79□□□□□ -0.68
CLDND1-203ENST00000394181 SPAG11AQ6PDA7 123 aa10.76□□□□□ -0.69
CLDND1-203ENST00000394181 MRPL34Q9BQ48 92 aaKnown RBP10.75□□□□□ -0.69
CLDND1-203ENST00000394181 H7BZZ5 65 aa10.75□□□□□ -0.69
CLDND1-203ENST00000394181 C5orf47Q569G3 176 aa10.74□□□□□ -0.69
CLDND1-203ENST00000394181 FAT3Q8TDW7 4589 aa10.73□□□□□ -0.69
CLDND1-203ENST00000394181 NDUFS5O43920 106 aa10.73□□□□□ -0.69
CLDND1-203ENST00000394181 MYCBP2O75592 4640 aa10.73□□□□□ -0.69
CLDND1-203ENST00000394181 LINC00313P59037 77 aa10.72□□□□□ -0.69
CLDND1-203ENST00000394181 RPS29P62273 56 aaKnown RBP10.72□□□□□ -0.69
CLDND1-203ENST00000394181 Q8N1X5 172 aa10.69□□□□□ -0.7
CLDND1-203ENST00000394181 FLG2Q5D862 2391 aaPredicted RBP10.69□□□□□ -0.7
CLDND1-203ENST00000394181 C8orf87E5RJ46 101 aa10.69□□□□□ -0.7
CLDND1-203ENST00000394181 H0Y9P7 68 aa10.69□□□□□ -0.7
CLDND1-203ENST00000394181 ZCCHC13Q8WW36 166 aaKnown RBP10.69□□□□□ -0.7
CLDND1-203ENST00000394181 KRTAP10-8P60410 259 aa10.67□□□□□ -0.7
CLDND1-203ENST00000394181 LINC00208Q96KT6 92 aa10.66□□□□□ -0.7
CLDND1-203ENST00000394181 TMEM258P61165 79 aa10.66□□□□□ -0.7
CLDND1-203ENST00000394181 RETNLBQ9BQ08 111 aa10.66□□□□□ -0.7
CLDND1-203ENST00000394181 KRTAP16-1A8MUX0 517 aa10.65□□□□□ -0.71
CLDND1-203ENST00000394181 MP68P56378 58 aa10.65□□□□□ -0.71
CLDND1-203ENST00000394181 TP53AIP1Q9HCN2 124 aa10.64□□□□□ -0.71
CLDND1-203ENST00000394181 TRAV22A0A0B4J277 110 aa10.63□□□□□ -0.71
CLDND1-203ENST00000394181 Q5W150 140 aa10.62□□□□□ -0.71
CLDND1-203ENST00000394181 NDUFC1O43677 76 aa10.61□□□□□ -0.71
CLDND1-203ENST00000394181 C1orf64Q8NEQ6 169 aa10.59□□□□□ -0.71
CLDND1-203ENST00000394181 Q8N9P0 234 aaPredicted RBP10.58□□□□□ -0.72
CLDND1-203ENST00000394181 KRTAP4-5Q9BYR2 181 aa10.58□□□□□ -0.72
CLDND1-203ENST00000394181 FAM236DA0A1B0GTK5 79 aa10.56□□□□□ -0.72
CLDND1-203ENST00000394181 FAM236CP0DP71 79 aa10.56□□□□□ -0.72
CLDND1-203ENST00000394181 KRTAP13-3Q3SY46 172 aa10.55□□□□□ -0.72
CLDND1-203ENST00000394181 C9orf92A6NGG3 77 aa10.53□□□□□ -0.72
CLDND1-203ENST00000394181 MT1HL1P0DM35 61 aa10.53□□□□□ -0.72
CLDND1-203ENST00000394181 H3BPC8 53 aa10.52□□□□□ -0.72
CLDND1-203ENST00000394181 DMBT1Q9UGM3 2413 aaPredicted RBP10.52□□□□□ -0.73
CLDND1-203ENST00000394181 PRR4Q16378 134 aa10.47□□□□□ -0.73
CLDND1-203ENST00000394181 PCOTHQ58A44 107 aa10.46□□□□□ -0.74
CLDND1-203ENST00000394181 OXTP01178 125 aa10.45□□□□□ -0.74
CLDND1-203ENST00000394181 ABCA13Q86UQ4 5058 aa10.43□□□□□ -0.74
CLDND1-203ENST00000394181 BIRC6Q9NR09 4857 aa10.4□□□□□ -0.74
CLDND1-203ENST00000394181 ATP5EP56381 51 aaPredicted RBP10.38□□□□□ -0.75
CLDND1-203ENST00000394181 CYP4F30PQ9H0H9 118 aa10.38□□□□□ -0.75
CLDND1-203ENST00000394181 LOC101927531A0A1B0GV80 90 aa10.37□□□□□ -0.75
CLDND1-203ENST00000394181 RPS28P62857 69 aaKnown RBP10.37□□□□□ -0.75
CLDND1-203ENST00000394181 SERP1Q9Y6X1 66 aa10.35□□□□□ -0.75
CLDND1-203ENST00000394181 HERC2O95714 4834 aa10.34□□□□□ -0.75
CLDND1-203ENST00000394181 A8MUU9 505 aa10.33□□□□□ -0.76
CLDND1-203ENST00000394181 C20orf166-AS1Q96NR2 134 aa10.33□□□□□ -0.76
CLDND1-203ENST00000394181 IGKV2-30P06310 120 aa10.31□□□□□ -0.76
CLDND1-203ENST00000394181 SPANXA2-OT1Q8N9U9 137 aa10.31□□□□□ -0.76
CLDND1-203ENST00000394181 IGLV7-46A0A075B6I9 117 aa10.29□□□□□ -0.76
CLDND1-203ENST00000394181 IGKV2D-30A0A075B6S6 120 aa10.29□□□□□ -0.76
CLDND1-203ENST00000394181 FP248Q71RG6 208 aaPredicted RBP10.28□□□□□ -0.76
CLDND1-203ENST00000394181 HRES1P13985 223 aa10.23□□□□□ -0.77
CLDND1-203ENST00000394181 Q75L30 129 aa10.2□□□□□ -0.78
CLDND1-203ENST00000394181 XP32Q5T750 250 aa10.17□□□□□ -0.78
CLDND1-203ENST00000394181 LPAP08519 4548 aa10.15□□□□□ -0.78
CLDND1-203ENST00000394181 C7orf65Q6ZTY9 151 aa10.13□□□□□ -0.79
CLDND1-203ENST00000394181 COA5Q86WW8 74 aa10.11□□□□□ -0.79
CLDND1-203ENST00000394181 RPL37P61927 97 aaKnown RBP10.09□□□□□ -0.79
CLDND1-203ENST00000394181 SMIM26A0A096LP01 95 aa10.09□□□□□ -0.79
CLDND1-203ENST00000394181 SVIPQ8NHG7 77 aa10.09□□□□□ -0.79
CLDND1-203ENST00000394181 LRP2P98164 4655 aa10.09□□□□□ -0.79
CLDND1-203ENST00000394181 SPINK7P58062 85 aa10.08□□□□□ -0.8
CLDND1-203ENST00000394181 J3QL48 77 aa10.07□□□□□ -0.8
CLDND1-203ENST00000394181 ATP11AUNQ6ZP68 121 aa10.06□□□□□ -0.8
CLDND1-203ENST00000394181 C4orf26Q17RF5 130 aa10.05□□□□□ -0.8
CLDND1-203ENST00000394181 DMAC1Q96GE9 116 aa10.05□□□□□ -0.8
CLDND1-203ENST00000394181 MPLKIPQ8TAP9 179 aa10.03□□□□□ -0.8
CLDND1-203ENST00000394181 PCLOQ9Y6V0 5065 aa10.02□□□□□ -0.8
CLDND1-203ENST00000394181 TPRXLQ17RH7 258 aa10.01□□□□□ -0.81
CLDND1-203ENST00000394181 ACYP2P14621 99 aa9.99□□□□□ -0.81
CLDND1-203ENST00000394181 KRTAP3-1Q9BYR8 98 aa9.93□□□□□ -0.82
CLDND1-203ENST00000394181 HERC1Q15751 4861 aa9.89□□□□□ -0.83
CLDND1-203ENST00000394181 Q1T7F1 81 aa9.87□□□□□ -0.83
CLDND1-203ENST00000394181 CHKB-CPT1BH3BT56 60 aa9.85□□□□□ -0.83
CLDND1-203ENST00000394181 PSPHP1O15172 72 aa9.81□□□□□ -0.84
CLDND1-203ENST00000394181 A8MUN3 132 aa9.8□□□□□ -0.84
CLDND1-203ENST00000394181 COX6B2Q6YFQ2 88 aa9.79□□□□□ -0.84
CLDND1-203ENST00000394181 V9GYY9 64 aa9.73□□□□□ -0.85
CLDND1-203ENST00000394181 PRR15LQ9BU68 103 aa9.71□□□□□ -0.86
CLDND1-203ENST00000394181 LINC01558Q9Y6Z2 57 aa9.7□□□□□ -0.86
CLDND1-203ENST00000394181 HMCN2Q8NDA2 5059 aa9.7□□□□□ -0.86
CLDND1-203ENST00000394181 Q5VV11 94 aa9.67□□□□□ -0.86
CLDND1-203ENST00000394181 MUC17Q685J3 4493 aa9.65□□□□□ -0.86
CLDND1-203ENST00000394181 SEC61BP60468 96 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms