RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 CD164Q04900 197 aa6.38□□□□□ -1.39
VTI1BP2-201ENST00000394154 NREPQ16612 68 aa6.37□□□□□ -1.39
VTI1BP2-201ENST00000394154 CDIP1Q9H305 208 aa6.37□□□□□ -1.39
VTI1BP2-201ENST00000394154 A0A087WSZ3 146 aa6.36□□□□□ -1.39
VTI1BP2-201ENST00000394154 TRBV7-7A0A0K0K1E9 115 aa6.36□□□□□ -1.39
VTI1BP2-201ENST00000394154 HRCT1Q6UXD1 115 aa6.36□□□□□ -1.39
VTI1BP2-201ENST00000394154 LINC00643Q86TS7 51 aa6.35□□□□□ -1.39
VTI1BP2-201ENST00000394154 Q6ZVQ6 151 aa6.34□□□□□ -1.39
VTI1BP2-201ENST00000394154 SS18L2Q9UHA2 77 aa6.34□□□□□ -1.39
VTI1BP2-201ENST00000394154 TPRXLQ17RH7 258 aa6.33□□□□□ -1.4
VTI1BP2-201ENST00000394154 SPAG11AQ6PDA7 123 aa6.32□□□□□ -1.4
VTI1BP2-201ENST00000394154 LINC00304Q8N9R0 145 aa6.31□□□□□ -1.4
VTI1BP2-201ENST00000394154 SPINK1P00995 79 aa6.3□□□□□ -1.4
VTI1BP2-201ENST00000394154 ATP5EP2Q5VTU8 51 aa6.3□□□□□ -1.4
VTI1BP2-201ENST00000394154 SIGMAR1Q99720 223 aa6.3□□□□□ -1.4
VTI1BP2-201ENST00000394154 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
VTI1BP2-201ENST00000394154 LIMD2Q9BT23 127 aa6.29□□□□□ -1.4
VTI1BP2-201ENST00000394154 IGKV3D-7A0A0C4DH55 119 aa6.28□□□□□ -1.4
VTI1BP2-201ENST00000394154 BPY2O14599 106 aa6.28□□□□□ -1.4
VTI1BP2-201ENST00000394154 CXCL6P80162 114 aa6.28□□□□□ -1.4
VTI1BP2-201ENST00000394154 Q5XG85 94 aa6.28□□□□□ -1.4
VTI1BP2-201ENST00000394154 MT-ATP8P03928 68 aa6.27□□□□□ -1.41
VTI1BP2-201ENST00000394154 J3KT08 172 aa6.26□□□□□ -1.41
VTI1BP2-201ENST00000394154 RPS29P62273 56 aaKnown RBP6.26□□□□□ -1.41
VTI1BP2-201ENST00000394154 ASB16-AS1Q495Z4 193 aa6.26□□□□□ -1.41
VTI1BP2-201ENST00000394154 LINC00472Q9H8W2 130 aa6.26□□□□□ -1.41
VTI1BP2-201ENST00000394154 RETNLBQ9BQ08 111 aa6.25□□□□□ -1.41
VTI1BP2-201ENST00000394154 IGLV7-46A0A075B6I9 117 aa6.24□□□□□ -1.41
VTI1BP2-201ENST00000394154 DEFB116Q30KQ4 102 aa6.24□□□□□ -1.41
VTI1BP2-201ENST00000394154 KRTAP4-7Q9BYR0 210 aa6.24□□□□□ -1.41
VTI1BP2-201ENST00000394154 IMUPQ9GZP8 106 aa6.24□□□□□ -1.41
VTI1BP2-201ENST00000394154 IGKV4-1P06312 121 aa6.23□□□□□ -1.41
VTI1BP2-201ENST00000394154 Q96NJ1 140 aa6.22□□□□□ -1.41
VTI1BP2-201ENST00000394154 NDUFB1O75438 58 aa6.21□□□□□ -1.42
VTI1BP2-201ENST00000394154 HIST1H4AP62805 103 aaKnown RBP6.21□□□□□ -1.42
VTI1BP2-201ENST00000394154 DSCR10P59022 87 aa6.2□□□□□ -1.42
VTI1BP2-201ENST00000394154 C1orf195Q5TG92 126 aa6.2□□□□□ -1.42
VTI1BP2-201ENST00000394154 A8MWP4 228 aa6.19□□□□□ -1.42
VTI1BP2-201ENST00000394154 KRTAP4-1Q9BYQ7 146 aa6.19□□□□□ -1.42
VTI1BP2-201ENST00000394154 PRR15Q8IV56 129 aa6.17□□□□□ -1.42
VTI1BP2-201ENST00000394154 Q8N9L7 120 aa6.17□□□□□ -1.42
VTI1BP2-201ENST00000394154 K7EQZ3 153 aa6.16□□□□□ -1.42
VTI1BP2-201ENST00000394154 A0A1B0GVX0 72 aa6.15□□□□□ -1.42
VTI1BP2-201ENST00000394154 MT1HP80294 61 aa6.15□□□□□ -1.42
VTI1BP2-201ENST00000394154 A0A087WVE0 104 aa6.14□□□□□ -1.43
VTI1BP2-201ENST00000394154 SEC61BP60468 96 aaKnown RBP6.14□□□□□ -1.43
VTI1BP2-201ENST00000394154 IGHV6-1A0A0B4J1U7 121 aa6.13□□□□□ -1.43
VTI1BP2-201ENST00000394154 KRTAP10-6P60371 365 aaPredicted RBP6.13□□□□□ -1.43
VTI1BP2-201ENST00000394154 SCGB1A1P11684 91 aa6.12□□□□□ -1.43
VTI1BP2-201ENST00000394154 HCG22E2RYF7 251 aa6.11□□□□□ -1.43
VTI1BP2-201ENST00000394154 FAM236AA0A1B0GUQ0 79 aa6.1□□□□□ -1.43
VTI1BP2-201ENST00000394154 FAM236BA0A1B0GV22 79 aa6.1□□□□□ -1.43
VTI1BP2-201ENST00000394154 C8orf87E5RJ46 101 aa6.1□□□□□ -1.43
VTI1BP2-201ENST00000394154 C8orf17Q9NRJ1 99 aa6.1□□□□□ -1.43
VTI1BP2-201ENST00000394154 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.43
VTI1BP2-201ENST00000394154 LINC00313P59037 77 aa6.08□□□□□ -1.44
VTI1BP2-201ENST00000394154 KRTAP19-4Q3LI73 84 aa6.08□□□□□ -1.44
VTI1BP2-201ENST00000394154 CASC2Q6XLA1 102 aa6.08□□□□□ -1.44
VTI1BP2-201ENST00000394154 FP248Q71RG6 208 aaPredicted RBP6.08□□□□□ -1.44
VTI1BP2-201ENST00000394154 WFDC13Q8IUB5 93 aa6.08□□□□□ -1.44
VTI1BP2-201ENST00000394154 MMP24-AS1A0A0U1RRL7 71 aa6.07□□□□□ -1.44
VTI1BP2-201ENST00000394154 hDV103S1A0JD37 113 aa6.07□□□□□ -1.44
VTI1BP2-201ENST00000394154 KRTAP19-2Q3LHN2 52 aa6.07□□□□□ -1.44
VTI1BP2-201ENST00000394154 KRTAP13-3Q3SY46 172 aa6.07□□□□□ -1.44
VTI1BP2-201ENST00000394154 ATOX1O00244 68 aa6.05□□□□□ -1.44
VTI1BP2-201ENST00000394154 LCE4AQ5TA78 99 aa6.05□□□□□ -1.44
VTI1BP2-201ENST00000394154 NOTCH2NLQ7Z3S9 236 aa6.05□□□□□ -1.44
VTI1BP2-201ENST00000394154 TMEM254Q8TBM7 123 aa6.04□□□□□ -1.44
VTI1BP2-201ENST00000394154 SMIM20Q8N5G0 67 aa6.03□□□□□ -1.44
VTI1BP2-201ENST00000394154 MRPL34Q9BQ48 92 aaKnown RBP6.02□□□□□ -1.45
VTI1BP2-201ENST00000394154 M0R2T5 61 aa6□□□□□ -1.45
VTI1BP2-201ENST00000394154 C9orf92A6NGG3 77 aa5.99□□□□□ -1.45
VTI1BP2-201ENST00000394154 NDUFS5O43920 106 aa5.99□□□□□ -1.45
VTI1BP2-201ENST00000394154 ANAPC13Q9BS18 74 aa5.99□□□□□ -1.45
VTI1BP2-201ENST00000394154 TRAV7A0A075B6U4 112 aa5.98□□□□□ -1.45
VTI1BP2-201ENST00000394154 KRTAP16-1A8MUX0 517 aa5.97□□□□□ -1.45
VTI1BP2-201ENST00000394154 OCR1Q9BZK8 76 aa5.97□□□□□ -1.45
VTI1BP2-201ENST00000394154 TP53AIP1Q9HCN2 124 aa5.97□□□□□ -1.45
VTI1BP2-201ENST00000394154 SERP2Q8N6R1 65 aa5.96□□□□□ -1.46
VTI1BP2-201ENST00000394154 KRTAP4-2Q9BYR5 136 aa5.96□□□□□ -1.46
VTI1BP2-201ENST00000394154 UQCRQO14949 82 aa5.95□□□□□ -1.46
VTI1BP2-201ENST00000394154 Q8N9P0 234 aaPredicted RBP5.95□□□□□ -1.46
VTI1BP2-201ENST00000394154 SYNE2Q8WXH0 6885 aaKnown RBP5.94□□□□□ -1.46
VTI1BP2-201ENST00000394154 SSPOA2VEC9 5147 aa5.93□□□□□ -1.46
VTI1BP2-201ENST00000394154 FCGBPQ9Y6R7 5405 aaPredicted RBP5.93□□□□□ -1.46
VTI1BP2-201ENST00000394154 H3BS24 57 aa5.93□□□□□ -1.46
VTI1BP2-201ENST00000394154 COX7CP15954 63 aa5.92□□□□□ -1.46
VTI1BP2-201ENST00000394154 C20orf166-AS1Q96NR2 134 aa5.92□□□□□ -1.46
VTI1BP2-201ENST00000394154 MACF1Q9UPN3 7388 aaKnown RBP5.92□□□□□ -1.46
VTI1BP2-201ENST00000394154 A8MUU9 505 aa5.91□□□□□ -1.46
VTI1BP2-201ENST00000394154 C5orf47Q569G3 176 aa5.91□□□□□ -1.46
VTI1BP2-201ENST00000394154 PCP4P48539 62 aa5.9□□□□□ -1.46
VTI1BP2-201ENST00000394154 USH2AO75445 5202 aa5.9□□□□□ -1.47
VTI1BP2-201ENST00000394154 MP68P56378 58 aa5.89□□□□□ -1.47
VTI1BP2-201ENST00000394154 Q75L30 129 aa5.89□□□□□ -1.47
VTI1BP2-201ENST00000394154 TRAV22A0A0B4J277 110 aa5.88□□□□□ -1.47
VTI1BP2-201ENST00000394154 H0Y9P7 68 aa5.88□□□□□ -1.47
VTI1BP2-201ENST00000394154 KRTAP4-11Q9BYQ6 195 aa5.88□□□□□ -1.47
VTI1BP2-201ENST00000394154 FLGP20930 4061 aaPredicted RBP5.87□□□□□ -1.47
VTI1BP2-201ENST00000394154 H3BPC8 53 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms