RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 FLNBO75369 2602 aaKnown RBP4.86□□□□□ -1.63
GABRA1-202ENST00000393943 MGAM2Q2M2H8 2515 aa4.85□□□□□ -1.63
GABRA1-202ENST00000393943 NBEAL1Q6ZS30 2694 aa4.85□□□□□ -1.63
GABRA1-202ENST00000393943 NOTCH1P46531 2555 aa4.85□□□□□ -1.63
GABRA1-202ENST00000393943 KRTAP13-2Q52LG2 175 aa4.84□□□□□ -1.63
GABRA1-202ENST00000393943 NF1P21359 2839 aa4.84□□□□□ -1.64
GABRA1-202ENST00000393943 DCHS1Q96JQ0 3298 aa4.84□□□□□ -1.64
GABRA1-202ENST00000393943 A0A0D9SG42 100 aa4.83□□□□□ -1.64
GABRA1-202ENST00000393943 ZFHX4Q86UP3 3567 aa4.81□□□□□ -1.64
GABRA1-202ENST00000393943 SMG1Q96Q15 3661 aaKnown RBP4.81□□□□□ -1.64
GABRA1-202ENST00000393943 A8MUU9 505 aa4.81□□□□□ -1.64
GABRA1-202ENST00000393943 S4R3F8 94 aa4.8□□□□□ -1.64
GABRA1-202ENST00000393943 KRTAP10-1P60331 282 aa4.79□□□□□ -1.64
GABRA1-202ENST00000393943 KRTAP16-1A8MUX0 517 aa4.79□□□□□ -1.64
GABRA1-202ENST00000393943 KRTAP10-2P60368 255 aa4.79□□□□□ -1.64
GABRA1-202ENST00000393943 STAB1Q9NY15 2570 aa4.78□□□□□ -1.64
GABRA1-202ENST00000393943 CSMD1Q96PZ7 3565 aa4.77□□□□□ -1.65
GABRA1-202ENST00000393943 COL6A5A8TX70 2615 aa4.77□□□□□ -1.65
GABRA1-202ENST00000393943 Q6ZSA8 131 aa4.77□□□□□ -1.65
GABRA1-202ENST00000393943 C20orf166-AS1Q96NR2 134 aa4.76□□□□□ -1.65
GABRA1-202ENST00000393943 CELSR2Q9HCU4 2923 aa4.75□□□□□ -1.65
GABRA1-202ENST00000393943 HIVEP1P15822 2718 aa4.75□□□□□ -1.65
GABRA1-202ENST00000393943 CELSR1Q9NYQ6 3014 aa4.75□□□□□ -1.65
GABRA1-202ENST00000393943 DMDP11532 3685 aa4.75□□□□□ -1.65
GABRA1-202ENST00000393943 SMR3BP02814 79 aaPredicted RBP4.73□□□□□ -1.65
GABRA1-202ENST00000393943 CRYBG3Q68DQ2 2970 aa4.73□□□□□ -1.65
GABRA1-202ENST00000393943 H0YAA0 97 aa4.72□□□□□ -1.65
GABRA1-202ENST00000393943 RELNP78509 3460 aa4.72□□□□□ -1.65
GABRA1-202ENST00000393943 LUZP6Q538Z0 58 aa4.71□□□□□ -1.66
GABRA1-202ENST00000393943 BSNQ9UPA5 3926 aa4.7□□□□□ -1.66
GABRA1-202ENST00000393943 KRTAP1-4P0C5Y4 121 aa4.7□□□□□ -1.66
GABRA1-202ENST00000393943 STAB2Q8WWQ8 2551 aa4.67□□□□□ -1.66
GABRA1-202ENST00000393943 ASPMQ8IZT6 3477 aa4.67□□□□□ -1.66
GABRA1-202ENST00000393943 LAMA5O15230 3695 aa4.67□□□□□ -1.66
GABRA1-202ENST00000393943 TENM3Q9P273 2699 aa4.67□□□□□ -1.66
GABRA1-202ENST00000393943 M0QZ58 72 aa4.66□□□□□ -1.66
GABRA1-202ENST00000393943 PDZD2O15018 2839 aa4.65□□□□□ -1.67
GABRA1-202ENST00000393943 A0A0A0MQY5 61 aa4.62□□□□□ -1.67
GABRA1-202ENST00000393943 MUC3AQ02505 3323 aa4.6□□□□□ -1.67
GABRA1-202ENST00000393943 DMBT1Q9UGM3 2413 aaPredicted RBP4.6□□□□□ -1.67
GABRA1-202ENST00000393943 R4GN34 69 aa4.59□□□□□ -1.68
GABRA1-202ENST00000393943 SPENQ96T58 3664 aaKnown RBP4.57□□□□□ -1.68
GABRA1-202ENST00000393943 VWFP04275 2813 aa4.56□□□□□ -1.68
GABRA1-202ENST00000393943 SVEP1Q4LDE5 3571 aa4.56□□□□□ -1.68
GABRA1-202ENST00000393943 NDUFAF8A1L188 74 aa4.55□□□□□ -1.68
GABRA1-202ENST00000393943 TENM1Q9UKZ4 2725 aa4.55□□□□□ -1.68
GABRA1-202ENST00000393943 ANK3Q12955 4377 aaKnown RBP4.55□□□□□ -1.68
GABRA1-202ENST00000393943 CAMK2N1Q7Z7J9 78 aa4.54□□□□□ -1.68
GABRA1-202ENST00000393943 FLG2Q5D862 2391 aaPredicted RBP4.5□□□□□ -1.69
GABRA1-202ENST00000393943 SEC61BP60468 96 aaKnown RBP4.49□□□□□ -1.69
GABRA1-202ENST00000393943 TGP01266 2768 aa4.49□□□□□ -1.69
GABRA1-202ENST00000393943 Q5VSD8 79 aa4.47□□□□□ -1.69
GABRA1-202ENST00000393943 PP632Q6XCG6 107 aa4.46□□□□□ -1.69
GABRA1-202ENST00000393943 P0C880 135 aa4.45□□□□□ -1.7
GABRA1-202ENST00000393943 TENM4Q6N022 2769 aa4.44□□□□□ -1.7
GABRA1-202ENST00000393943 KRTAP3-1Q9BYR8 98 aa4.44□□□□□ -1.7
GABRA1-202ENST00000393943 ZFHX3Q15911 3703 aa4.43□□□□□ -1.7
GABRA1-202ENST00000393943 PKD1L1Q8TDX9 2849 aa4.43□□□□□ -1.7
GABRA1-202ENST00000393943 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
GABRA1-202ENST00000393943 XP32Q5T750 250 aa4.41□□□□□ -1.7
GABRA1-202ENST00000393943 OTOGQ6ZRI0 2925 aa4.4□□□□□ -1.7
GABRA1-202ENST00000393943 J3QL48 77 aa4.4□□□□□ -1.71
GABRA1-202ENST00000393943 PLAC4Q8WY50 150 aa4.39□□□□□ -1.71
GABRA1-202ENST00000393943 AKAP9Q99996 3911 aa4.37□□□□□ -1.71
GABRA1-202ENST00000393943 TPRXLQ17RH7 258 aa4.36□□□□□ -1.71
GABRA1-202ENST00000393943 SRRM2Q9UQ35 2752 aaKnown RBP4.34□□□□□ -1.71
GABRA1-202ENST00000393943 KRTAP10-6P60371 365 aaPredicted RBP4.34□□□□□ -1.71
GABRA1-202ENST00000393943 KRTAP21-3Q3LHN1 58 aa4.33□□□□□ -1.72
GABRA1-202ENST00000393943 VPS13CQ709C8 3753 aa4.33□□□□□ -1.72
GABRA1-202ENST00000393943 TENM2Q9NT68 2774 aa4.33□□□□□ -1.72
GABRA1-202ENST00000393943 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
GABRA1-202ENST00000393943 KRTAP12-2P59991 146 aa4.31□□□□□ -1.72
GABRA1-202ENST00000393943 CSMD2Q7Z408 3487 aa4.3□□□□□ -1.72
GABRA1-202ENST00000393943 KRTAP10-8P60410 259 aa4.29□□□□□ -1.72
GABRA1-202ENST00000393943 TNP1P09430 55 aa4.28□□□□□ -1.72
GABRA1-202ENST00000393943 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
GABRA1-202ENST00000393943 TRRAPQ9Y4A5 3859 aa4.27□□□□□ -1.73
GABRA1-202ENST00000393943 KRTAP13-4Q3LI77 160 aa4.27□□□□□ -1.73
GABRA1-202ENST00000393943 NBPF19A0A087WUL8 3843 aa4.26□□□□□ -1.73
GABRA1-202ENST00000393943 HUWE1Q7Z6Z7 4374 aaKnown RBP4.26□□□□□ -1.73
GABRA1-202ENST00000393943 A0A1B0GVY2 172 aa4.25□□□□□ -1.73
GABRA1-202ENST00000393943 KRTAP3-2Q9BYR7 98 aa4.24□□□□□ -1.73
GABRA1-202ENST00000393943 ALMS1Q8TCU4 4167 aa4.23□□□□□ -1.73
GABRA1-202ENST00000393943 FBN1P35555 2871 aaKnown RBP4.23□□□□□ -1.73
GABRA1-202ENST00000393943 MEGF8Q7Z7M0 2845 aa4.22□□□□□ -1.73
GABRA1-202ENST00000393943 KRTAP3-3Q9BYR6 98 aa4.22□□□□□ -1.73
GABRA1-202ENST00000393943 CUBNO60494 3623 aa4.21□□□□□ -1.74
GABRA1-202ENST00000393943 FBN3Q75N90 2809 aa4.19□□□□□ -1.74
GABRA1-202ENST00000393943 ZNF469Q96JG9 3925 aaPredicted RBP4.18□□□□□ -1.74
GABRA1-202ENST00000393943 KRTAP10-4P60372 401 aaPredicted RBP4.11□□□□□ -1.75
GABRA1-202ENST00000393943 M0R2T5 61 aa4.09□□□□□ -1.75
GABRA1-202ENST00000393943 DNAH17Q9UFH2 4485 aa4.08□□□□□ -1.76
GABRA1-202ENST00000393943 DNAH3Q8TD57 4116 aa4.07□□□□□ -1.76
GABRA1-202ENST00000393943 DNAH9Q9NYC9 4486 aa4.07□□□□□ -1.76
GABRA1-202ENST00000393943 DNAH1Q9P2D7 4330 aa4.05□□□□□ -1.76
GABRA1-202ENST00000393943 VPS13DQ5THJ4 4388 aa4.05□□□□□ -1.76
GABRA1-202ENST00000393943 DNAH10Q8IVF4 4471 aa4.04□□□□□ -1.76
GABRA1-202ENST00000393943 KRTAP23-1A1A580 65 aa4.03□□□□□ -1.76
GABRA1-202ENST00000393943 COL7A1Q02388 2944 aa4.01□□□□□ -1.77
GABRA1-202ENST00000393943 DNAH8Q96JB1 4490 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms