RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 C14orf144Q96I85 54 aa7.25□□□□□ -1.25
CHMP3-202ENST00000393773 DNAL4O96015 105 aa7.24□□□□□ -1.25
CHMP3-202ENST00000393773 CEND1Q8N111 149 aa7.22□□□□□ -1.25
CHMP3-202ENST00000393773 H3BQ85 93 aa7.21□□□□□ -1.26
CHMP3-202ENST00000393773 TMEM256-PLSCR3K7ERE1 68 aa7.2□□□□□ -1.26
CHMP3-202ENST00000393773 FXYD2P54710 66 aa7.2□□□□□ -1.26
CHMP3-202ENST00000393773 TMEM238LA0A1B0GVL6 79 aa7.19□□□□□ -1.26
CHMP3-202ENST00000393773 A6NJY4 79 aa7.19□□□□□ -1.26
CHMP3-202ENST00000393773 VPS25Q9BRG1 176 aa7.18□□□□□ -1.26
CHMP3-202ENST00000393773 PAM16Q9Y3D7 125 aa7.18□□□□□ -1.26
CHMP3-202ENST00000393773 SPATA45Q537H7 98 aa7.17□□□□□ -1.26
CHMP3-202ENST00000393773 J3KT08 172 aa7.16□□□□□ -1.26
CHMP3-202ENST00000393773 S100A6P06703 90 aa7.16□□□□□ -1.26
CHMP3-202ENST00000393773 UBE2V1Q13404 147 aa7.16□□□□□ -1.26
CHMP3-202ENST00000393773 K7ERJ3 54 aa7.13□□□□□ -1.27
CHMP3-202ENST00000393773 C8orf17Q9NRJ1 99 aa7.12□□□□□ -1.27
CHMP3-202ENST00000393773 PSMB2P49721 201 aa7.11□□□□□ -1.27
CHMP3-202ENST00000393773 RBM3P98179 157 aaKnown RBP7.1□□□□□ -1.27
CHMP3-202ENST00000393773 H1FX-AS1Q4G0G2 97 aa7.1□□□□□ -1.27
CHMP3-202ENST00000393773 VAMP8Q9BV40 100 aa7.1□□□□□ -1.27
CHMP3-202ENST00000393773 LYRM7Q5U5X0 104 aa7.09□□□□□ -1.27
CHMP3-202ENST00000393773 Q6ZQT0 140 aa7.09□□□□□ -1.27
CHMP3-202ENST00000393773 NDUFB1O75438 58 aa7.08□□□□□ -1.28
CHMP3-202ENST00000393773 DSCR8Q96T75 97 aa7.08□□□□□ -1.28
CHMP3-202ENST00000393773 IGKV3D-7A0A0C4DH55 119 aa7.07□□□□□ -1.28
CHMP3-202ENST00000393773 COX6CP09669 75 aa7.07□□□□□ -1.28
CHMP3-202ENST00000393773 C21orf62-AS1Q17RA5 79 aa7.07□□□□□ -1.28
CHMP3-202ENST00000393773 KRTAP20-1Q3LI63 56 aa7.06□□□□□ -1.28
CHMP3-202ENST00000393773 MDN1Q9NU22 5596 aa7.05□□□□□ -1.28
CHMP3-202ENST00000393773 Q6ZVQ6 151 aa7.05□□□□□ -1.28
CHMP3-202ENST00000393773 A6NN06 94 aa7.03□□□□□ -1.28
CHMP3-202ENST00000393773 C9JAW5 83 aa7.03□□□□□ -1.28
CHMP3-202ENST00000393773 HSD52Q0P140 79 aa7.03□□□□□ -1.28
CHMP3-202ENST00000393773 MT1BP07438 61 aa7.02□□□□□ -1.29
CHMP3-202ENST00000393773 S100A1P23297 94 aa7.02□□□□□ -1.29
CHMP3-202ENST00000393773 KMT2DO14686 5537 aa7.01□□□□□ -1.29
CHMP3-202ENST00000393773 MMP24-AS1A0A0U1RRL7 71 aa6.99□□□□□ -1.29
CHMP3-202ENST00000393773 KRTAP5-9P26371 169 aa6.98□□□□□ -1.29
CHMP3-202ENST00000393773 PRR15Q8IV56 129 aa6.97□□□□□ -1.29
CHMP3-202ENST00000393773 TMEM254Q8TBM7 123 aa6.97□□□□□ -1.29
CHMP3-202ENST00000393773 MRPL34Q9BQ48 92 aaKnown RBP6.97□□□□□ -1.29
CHMP3-202ENST00000393773 BAALC-AS2P0C853 105 aa6.95□□□□□ -1.3
CHMP3-202ENST00000393773 LOC110117498A0A087WWA1 95 aa6.94□□□□□ -1.3
CHMP3-202ENST00000393773 KRTAP19-8Q3LI54 63 aa6.94□□□□□ -1.3
CHMP3-202ENST00000393773 Q5VV11 94 aa6.94□□□□□ -1.3
CHMP3-202ENST00000393773 A0A1B0GW54 56 aa6.93□□□□□ -1.3
CHMP3-202ENST00000393773 IGKV2D-30A0A075B6S6 120 aa6.92□□□□□ -1.3
CHMP3-202ENST00000393773 IGKV2-30P06310 120 aa6.92□□□□□ -1.3
CHMP3-202ENST00000393773 SCGB1C2P0DMR2 95 aa6.92□□□□□ -1.3
CHMP3-202ENST00000393773 KRTAP10-5P60370 271 aa6.92□□□□□ -1.3
CHMP3-202ENST00000393773 C7orf65Q6ZTY9 151 aa6.91□□□□□ -1.3
CHMP3-202ENST00000393773 SPRR2GQ9BYE4 73 aa6.9□□□□□ -1.3
CHMP3-202ENST00000393773 FAM236AA0A1B0GUQ0 79 aa6.89□□□□□ -1.31
CHMP3-202ENST00000393773 FAM236BA0A1B0GV22 79 aa6.89□□□□□ -1.31
CHMP3-202ENST00000393773 hDV103S1A0JD37 113 aa6.88□□□□□ -1.31
CHMP3-202ENST00000393773 JMJD7-PLA2G4BH0Y9G9 81 aa6.88□□□□□ -1.31
CHMP3-202ENST00000393773 NDUFS5O43920 106 aa6.88□□□□□ -1.31
CHMP3-202ENST00000393773 K7EQZ3 153 aa6.87□□□□□ -1.31
CHMP3-202ENST00000393773 C5orf47Q569G3 176 aa6.87□□□□□ -1.31
CHMP3-202ENST00000393773 Q5W150 140 aa6.87□□□□□ -1.31
CHMP3-202ENST00000393773 PDE6GP18545 87 aa6.85□□□□□ -1.31
CHMP3-202ENST00000393773 C4orf26Q17RF5 130 aa6.85□□□□□ -1.31
CHMP3-202ENST00000393773 PYY3Q5JQD4 70 aa6.85□□□□□ -1.31
CHMP3-202ENST00000393773 C14orf132Q9NPU4 83 aa6.85□□□□□ -1.31
CHMP3-202ENST00000393773 NREPQ16612 68 aa6.84□□□□□ -1.31
CHMP3-202ENST00000393773 UQCR10Q9UDW1 63 aa6.82□□□□□ -1.32
CHMP3-202ENST00000393773 ATXN8Q156A1 80 aa6.81□□□□□ -1.32
CHMP3-202ENST00000393773 KRTAP3-1Q9BYR8 98 aa6.77□□□□□ -1.33
CHMP3-202ENST00000393773 S4R3F8 94 aa6.77□□□□□ -1.33
CHMP3-202ENST00000393773 NAA38Q9BRA0 125 aaKnown RBP6.76□□□□□ -1.33
CHMP3-202ENST00000393773 KRTAP2-3P0C7H8 128 aa6.75□□□□□ -1.33
CHMP3-202ENST00000393773 KRTAP2-4Q9BYR9 128 aa6.75□□□□□ -1.33
CHMP3-202ENST00000393773 LCA10Q71F78 164 aa6.74□□□□□ -1.33
CHMP3-202ENST00000393773 KLKP1Q107X0 134 aa6.73□□□□□ -1.33
CHMP3-202ENST00000393773 CSAG1Q6PB30 78 aa6.73□□□□□ -1.33
CHMP3-202ENST00000393773 HCG22E2RYF7 251 aa6.72□□□□□ -1.33
CHMP3-202ENST00000393773 BPY2O14599 106 aa6.7□□□□□ -1.34
CHMP3-202ENST00000393773 CASC2Q6XLA1 102 aa6.7□□□□□ -1.34
CHMP3-202ENST00000393773 Q8N9L7 120 aa6.69□□□□□ -1.34
CHMP3-202ENST00000393773 SMCPP49901 116 aaPredicted RBP6.68□□□□□ -1.34
CHMP3-202ENST00000393773 CXCL6P80162 114 aa6.68□□□□□ -1.34
CHMP3-202ENST00000393773 C1orf64Q8NEQ6 169 aa6.65□□□□□ -1.34
CHMP3-202ENST00000393773 IMUPQ9GZP8 106 aa6.65□□□□□ -1.34
CHMP3-202ENST00000393773 SPRR2EP22531 72 aa6.63□□□□□ -1.35
CHMP3-202ENST00000393773 SPRR2BP35325 72 aa6.63□□□□□ -1.35
CHMP3-202ENST00000393773 SPRR2AP35326 72 aa6.63□□□□□ -1.35
CHMP3-202ENST00000393773 SPRR2FQ96RM1 72 aa6.63□□□□□ -1.35
CHMP3-202ENST00000393773 M0R143 59 aa6.62□□□□□ -1.35
CHMP3-202ENST00000393773 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
CHMP3-202ENST00000393773 CRIPTQ9P021 101 aa6.59□□□□□ -1.35
CHMP3-202ENST00000393773 H3BT86 120 aa6.57□□□□□ -1.36
CHMP3-202ENST00000393773 LCE1AQ5T7P2 110 aa6.51□□□□□ -1.37
CHMP3-202ENST00000393773 KRTAP2-2Q9BYT5 123 aa6.51□□□□□ -1.37
CHMP3-202ENST00000393773 KRTAP2-1Q9BYU5 128 aa6.51□□□□□ -1.37
CHMP3-202ENST00000393773 A0A087WVE0 104 aa6.5□□□□□ -1.37
CHMP3-202ENST00000393773 MT1XP80297 61 aa6.49□□□□□ -1.37
CHMP3-202ENST00000393773 TMA7Q9Y2S6 64 aaKnown RBP6.48□□□□□ -1.37
CHMP3-202ENST00000393773 KRTAP8-1Q8IUC2 63 aa6.47□□□□□ -1.37
CHMP3-202ENST00000393773 TSTD3H0UI37 97 aa6.46□□□□□ -1.38
CHMP3-202ENST00000393773 PRO2289Q9P1D8 64 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms