RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 DNAH2Q9P225 4427 aa11.13□□□□□ -0.63
CBX1-202ENST00000393408 FBN3Q75N90 2809 aa11.12□□□□□ -0.63
CBX1-202ENST00000393408 KMT2AQ03164 3969 aa11.12□□□□□ -0.63
CBX1-202ENST00000393408 PRR15LQ9BU68 103 aa11.12□□□□□ -0.63
CBX1-202ENST00000393408 IGLV7-43P04211 117 aa11.11□□□□□ -0.63
CBX1-202ENST00000393408 CHKB-CPT1BH3BT56 60 aa11.08□□□□□ -0.64
CBX1-202ENST00000393408 SPINK6Q6UWN8 80 aa11.07□□□□□ -0.64
CBX1-202ENST00000393408 LOC101927531A0A1B0GV80 90 aa11.07□□□□□ -0.64
CBX1-202ENST00000393408 C1orf134Q5TEV5 83 aa11.06□□□□□ -0.64
CBX1-202ENST00000393408 A8MU10 97 aa11.05□□□□□ -0.64
CBX1-202ENST00000393408 CIRBP-AS1Q8TBR5 109 aa11.05□□□□□ -0.64
CBX1-202ENST00000393408 Q75L30 129 aa11.04□□□□□ -0.64
CBX1-202ENST00000393408 KRTAP13-3Q3SY46 172 aa11.03□□□□□ -0.64
CBX1-202ENST00000393408 HRES1P13985 223 aa11.03□□□□□ -0.64
CBX1-202ENST00000393408 Q5W150 140 aa11.03□□□□□ -0.64
CBX1-202ENST00000393408 MEGF8Q7Z7M0 2845 aa11.02□□□□□ -0.65
CBX1-202ENST00000393408 SSBP3-AS1Q7Z2R9 100 aa11□□□□□ -0.65
CBX1-202ENST00000393408 LINC01558Q9Y6Z2 57 aa10.99□□□□□ -0.65
CBX1-202ENST00000393408 TGP01266 2768 aa10.99□□□□□ -0.65
CBX1-202ENST00000393408 ALMS1Q8TCU4 4167 aa10.97□□□□□ -0.65
CBX1-202ENST00000393408 SPAG11AQ6PDA7 123 aa10.97□□□□□ -0.65
CBX1-202ENST00000393408 C8orf87E5RJ46 101 aa10.96□□□□□ -0.66
CBX1-202ENST00000393408 DNHD1Q96M86 4753 aa10.94□□□□□ -0.66
CBX1-202ENST00000393408 A6NED7 52 aa10.93□□□□□ -0.66
CBX1-202ENST00000393408 PMAIP1Q13794 54 aa10.93□□□□□ -0.66
CBX1-202ENST00000393408 LCA10Q71F78 164 aa10.93□□□□□ -0.66
CBX1-202ENST00000393408 LY6G6CO95867 125 aa10.92□□□□□ -0.66
CBX1-202ENST00000393408 DNAH6Q9C0G6 4158 aa10.9□□□□□ -0.66
CBX1-202ENST00000393408 KRTAP10-2P60368 255 aa10.9□□□□□ -0.66
CBX1-202ENST00000393408 DNAH11Q96DT5 4516 aa10.9□□□□□ -0.66
CBX1-202ENST00000393408 DNAH5Q8TE73 4624 aa10.87□□□□□ -0.67
CBX1-202ENST00000393408 LINC00313P59037 77 aa10.87□□□□□ -0.67
CBX1-202ENST00000393408 KRTAP13-2Q52LG2 175 aa10.86□□□□□ -0.67
CBX1-202ENST00000393408 CDC42SE1Q9NRR8 79 aa10.84□□□□□ -0.67
CBX1-202ENST00000393408 ATP11AUNQ6ZP68 121 aa10.84□□□□□ -0.67
CBX1-202ENST00000393408 PRR26Q8N8Z3 221 aa10.83□□□□□ -0.68
CBX1-202ENST00000393408 FAM229AH3BQW9 127 aa10.82□□□□□ -0.68
CBX1-202ENST00000393408 ACYP2P14621 99 aa10.82□□□□□ -0.68
CBX1-202ENST00000393408 SPTSSBQ8NFR3 76 aa10.82□□□□□ -0.68
CBX1-202ENST00000393408 Q6ZSA8 131 aa10.8□□□□□ -0.68
CBX1-202ENST00000393408 DMAC1Q96GE9 116 aa10.79□□□□□ -0.68
CBX1-202ENST00000393408 SPINK7P58062 85 aa10.78□□□□□ -0.68
CBX1-202ENST00000393408 KRTAP10-1P60331 282 aa10.77□□□□□ -0.69
CBX1-202ENST00000393408 RETNLBQ9BQ08 111 aa10.76□□□□□ -0.69
CBX1-202ENST00000393408 KRTAP16-1A8MUX0 517 aa10.76□□□□□ -0.69
CBX1-202ENST00000393408 IGKV2-30P06310 120 aa10.76□□□□□ -0.69
CBX1-202ENST00000393408 KRTAP1-4P0C5Y4 121 aa10.73□□□□□ -0.69
CBX1-202ENST00000393408 PKD1P98161 4303 aa10.72□□□□□ -0.69
CBX1-202ENST00000393408 LRP1BQ9NZR2 4599 aa10.71□□□□□ -0.69
CBX1-202ENST00000393408 A6NN06 94 aa10.71□□□□□ -0.69
CBX1-202ENST00000393408 SEC61GP60059 68 aa10.69□□□□□ -0.7
CBX1-202ENST00000393408 KTN1-AS1Q86SY8 53 aa10.67□□□□□ -0.7
CBX1-202ENST00000393408 FAT2Q9NYQ8 4349 aa10.63□□□□□ -0.71
CBX1-202ENST00000393408 VPS13BQ7Z7G8 4022 aa10.6□□□□□ -0.71
CBX1-202ENST00000393408 HYDINQ4G0P3 5121 aa10.59□□□□□ -0.71
CBX1-202ENST00000393408 IGKV2D-30A0A075B6S6 120 aa10.58□□□□□ -0.72
CBX1-202ENST00000393408 PLA2G1BP04054 148 aaKnown RBP10.58□□□□□ -0.72
CBX1-202ENST00000393408 C4orf48Q5BLP8 95 aa10.58□□□□□ -0.72
CBX1-202ENST00000393408 TYMSOSQ8TAI1 123 aa10.56□□□□□ -0.72
CBX1-202ENST00000393408 A0A1B0GU69 56 aa10.55□□□□□ -0.72
CBX1-202ENST00000393408 SPINK1P00995 79 aa10.55□□□□□ -0.72
CBX1-202ENST00000393408 KRTAP21-3Q3LHN1 58 aa10.52□□□□□ -0.73
CBX1-202ENST00000393408 C7orf65Q6ZTY9 151 aa10.49□□□□□ -0.73
CBX1-202ENST00000393408 SPATA8Q6RVD6 105 aa10.43□□□□□ -0.74
CBX1-202ENST00000393408 RBM12B-AS1Q9P1G2 102 aa10.43□□□□□ -0.74
CBX1-202ENST00000393408 LINC00304Q8N9R0 145 aa10.42□□□□□ -0.74
CBX1-202ENST00000393408 RPS29P62273 56 aaKnown RBP10.42□□□□□ -0.74
CBX1-202ENST00000393408 UQCR11O14957 56 aa10.37□□□□□ -0.75
CBX1-202ENST00000393408 SACSQ9NZJ4 4579 aa10.36□□□□□ -0.75
CBX1-202ENST00000393408 MIR22HGQ0VDD5 57 aa10.35□□□□□ -0.75
CBX1-202ENST00000393408 Q8N1X5 172 aa10.34□□□□□ -0.75
CBX1-202ENST00000393408 PKHD1P08F94 4074 aa10.33□□□□□ -0.76
CBX1-202ENST00000393408 SMR3BP02814 79 aaPredicted RBP10.26□□□□□ -0.77
CBX1-202ENST00000393408 A8MUU9 505 aa10.25□□□□□ -0.77
CBX1-202ENST00000393408 C20orf166-AS1Q96NR2 134 aa10.24□□□□□ -0.77
CBX1-202ENST00000393408 C9orf92A6NGG3 77 aa10.23□□□□□ -0.77
CBX1-202ENST00000393408 DYNC1H1Q14204 4646 aaKnown RBP10.2□□□□□ -0.78
CBX1-202ENST00000393408 PKHD1L1Q86WI1 4243 aa10.2□□□□□ -0.78
CBX1-202ENST00000393408 PRAC1Q96KF2 57 aa10.19□□□□□ -0.78
CBX1-202ENST00000393408 KRTAP10-4P60372 401 aaPredicted RBP10.18□□□□□ -0.78
CBX1-202ENST00000393408 ADM2Q7Z4H4 148 aa10.18□□□□□ -0.78
CBX1-202ENST00000393408 APOBP04114 4563 aaKnown RBP10.14□□□□□ -0.79
CBX1-202ENST00000393408 KRTAP3-1Q9BYR8 98 aa10.14□□□□□ -0.79
CBX1-202ENST00000393408 A0A1B0GVY2 172 aa10.13□□□□□ -0.79
CBX1-202ENST00000393408 FAT1Q14517 4588 aa10.08□□□□□ -0.8
CBX1-202ENST00000393408 H0YAA0 97 aa10.03□□□□□ -0.8
CBX1-202ENST00000393408 A0A1B0GU33 70 aa9.96□□□□□ -0.82
CBX1-202ENST00000393408 COX6B2Q6YFQ2 88 aa9.94□□□□□ -0.82
CBX1-202ENST00000393408 FLG2Q5D862 2391 aaPredicted RBP9.94□□□□□ -0.82
CBX1-202ENST00000393408 H1FX-AS1Q4G0G2 97 aa9.93□□□□□ -0.82
CBX1-202ENST00000393408 LINC01554Q52M75 96 aa9.89□□□□□ -0.83
CBX1-202ENST00000393408 CSAG1Q6PB30 78 aa9.89□□□□□ -0.83
CBX1-202ENST00000393408 KMT2CQ8NEZ4 4911 aaKnown RBP9.86□□□□□ -0.83
CBX1-202ENST00000393408 RYR2Q92736 4967 aa9.86□□□□□ -0.83
CBX1-202ENST00000393408 FAT3Q8TDW7 4589 aa9.82□□□□□ -0.84
CBX1-202ENST00000393408 TNXBP22105 4242 aa9.78□□□□□ -0.84
CBX1-202ENST00000393408 KRTAP10-8P60410 259 aa9.78□□□□□ -0.84
CBX1-202ENST00000393408 LRP1Q07954 4544 aaKnown RBP9.73□□□□□ -0.85
CBX1-202ENST00000393408 RPL37P61927 97 aaKnown RBP9.73□□□□□ -0.85
CBX1-202ENST00000393408 KRTAP3-3Q9BYR6 98 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms