RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 EPPK1P58107 5090 aaKnown RBP11.94□□□□□ -0.5
CSNK1D-203ENST00000392334 V9GYY9 64 aa11.93□□□□□ -0.5
CSNK1D-203ENST00000392334 APOBP04114 4563 aaKnown RBP11.92□□□□□ -0.5
CSNK1D-203ENST00000392334 ASB16-AS1Q495Z4 193 aa11.9□□□□□ -0.5
CSNK1D-203ENST00000392334 ZNF861PO60384 105 aa11.89□□□□□ -0.51
CSNK1D-203ENST00000392334 Q96NJ1 140 aa11.89□□□□□ -0.51
CSNK1D-203ENST00000392334 LINC00483Q53H64 154 aa11.89□□□□□ -0.51
CSNK1D-203ENST00000392334 IGLV7-43P04211 117 aa11.88□□□□□ -0.51
CSNK1D-203ENST00000392334 ANAPC11Q9NYG5 84 aa11.86□□□□□ -0.51
CSNK1D-203ENST00000392334 MOBPQ13875 183 aa11.85□□□□□ -0.51
CSNK1D-203ENST00000392334 TP53AIP1Q9HCN2 124 aa11.84□□□□□ -0.51
CSNK1D-203ENST00000392334 VPS13BQ7Z7G8 4022 aa11.83□□□□□ -0.52
CSNK1D-203ENST00000392334 PSPHP1O15172 72 aa11.82□□□□□ -0.52
CSNK1D-203ENST00000392334 SMR3BP02814 79 aaPredicted RBP11.81□□□□□ -0.52
CSNK1D-203ENST00000392334 ZNF706Q9Y5V0 76 aaPredicted RBP11.81□□□□□ -0.52
CSNK1D-203ENST00000392334 IGLV9-49A0A0B4J1Y8 123 aa11.81□□□□□ -0.52
CSNK1D-203ENST00000392334 FAT1Q14517 4588 aa11.8□□□□□ -0.52
CSNK1D-203ENST00000392334 IGLV7-46A0A075B6I9 117 aa11.8□□□□□ -0.52
CSNK1D-203ENST00000392334 C1orf195Q5TG92 126 aa11.79□□□□□ -0.52
CSNK1D-203ENST00000392334 C8orf17Q9NRJ1 99 aa11.79□□□□□ -0.52
CSNK1D-203ENST00000392334 Q8N9P0 234 aaPredicted RBP11.77□□□□□ -0.53
CSNK1D-203ENST00000392334 A8MUN3 132 aa11.76□□□□□ -0.53
CSNK1D-203ENST00000392334 LIMD2Q9BT23 127 aa11.76□□□□□ -0.53
CSNK1D-203ENST00000392334 A0A1B0GVX0 72 aa11.74□□□□□ -0.53
CSNK1D-203ENST00000392334 Q5VV11 94 aa11.74□□□□□ -0.53
CSNK1D-203ENST00000392334 KIAA1109Q2LD37 5005 aa11.74□□□□□ -0.53
CSNK1D-203ENST00000392334 HSPG2P98160 4391 aa11.73□□□□□ -0.53
CSNK1D-203ENST00000392334 COA5Q86WW8 74 aa11.7□□□□□ -0.54
CSNK1D-203ENST00000392334 CD164Q04900 197 aa11.67□□□□□ -0.54
CSNK1D-203ENST00000392334 MRPL34Q9BQ48 92 aaKnown RBP11.67□□□□□ -0.54
CSNK1D-203ENST00000392334 RYR1P21817 5038 aa11.67□□□□□ -0.54
CSNK1D-203ENST00000392334 CDK2AP2O75956 126 aa11.67□□□□□ -0.54
CSNK1D-203ENST00000392334 IGHV6-1A0A0B4J1U7 121 aa11.66□□□□□ -0.54
CSNK1D-203ENST00000392334 PCOTHQ58A44 107 aa11.64□□□□□ -0.55
CSNK1D-203ENST00000392334 LOC101927531A0A1B0GV80 90 aa11.64□□□□□ -0.55
CSNK1D-203ENST00000392334 KRTAP17-1Q9BYP8 105 aa11.62□□□□□ -0.55
CSNK1D-203ENST00000392334 PRR15LQ9BU68 103 aa11.61□□□□□ -0.55
CSNK1D-203ENST00000392334 A0A087X002 238 aa11.6□□□□□ -0.55
CSNK1D-203ENST00000392334 NDUFS5O43920 106 aa11.6□□□□□ -0.55
CSNK1D-203ENST00000392334 KRTAP10-4P60372 401 aaPredicted RBP11.6□□□□□ -0.55
CSNK1D-203ENST00000392334 Q75L30 129 aa11.6□□□□□ -0.55
CSNK1D-203ENST00000392334 CHKB-CPT1BH3BT56 60 aa11.58□□□□□ -0.56
CSNK1D-203ENST00000392334 KRTAP1-4P0C5Y4 121 aa11.55□□□□□ -0.56
CSNK1D-203ENST00000392334 NOTCH2NLQ7Z3S9 236 aa11.55□□□□□ -0.56
CSNK1D-203ENST00000392334 KRTAP13-2Q52LG2 175 aa11.53□□□□□ -0.56
CSNK1D-203ENST00000392334 LINC01558Q9Y6Z2 57 aa11.53□□□□□ -0.56
CSNK1D-203ENST00000392334 FAM229AH3BQW9 127 aa11.53□□□□□ -0.56
CSNK1D-203ENST00000392334 PLA2G1BP04054 148 aaKnown RBP11.53□□□□□ -0.56
CSNK1D-203ENST00000392334 Q5VSD8 79 aa11.52□□□□□ -0.56
CSNK1D-203ENST00000392334 PMAIP1Q13794 54 aa11.52□□□□□ -0.57
CSNK1D-203ENST00000392334 SPINK6Q6UWN8 80 aa11.52□□□□□ -0.57
CSNK1D-203ENST00000392334 KRTAP13-3Q3SY46 172 aa11.5□□□□□ -0.57
CSNK1D-203ENST00000392334 HRES1P13985 223 aa11.5□□□□□ -0.57
CSNK1D-203ENST00000392334 A8MU10 97 aa11.49□□□□□ -0.57
CSNK1D-203ENST00000392334 C8orf87E5RJ46 101 aa11.46□□□□□ -0.57
CSNK1D-203ENST00000392334 SSBP3-AS1Q7Z2R9 100 aa11.46□□□□□ -0.57
CSNK1D-203ENST00000392334 BIRC6Q9NR09 4857 aa11.45□□□□□ -0.58
CSNK1D-203ENST00000392334 Q8N1X5 172 aa11.44□□□□□ -0.58
CSNK1D-203ENST00000392334 Q5W150 140 aa11.43□□□□□ -0.58
CSNK1D-203ENST00000392334 LCA10Q71F78 164 aa11.43□□□□□ -0.58
CSNK1D-203ENST00000392334 A6NED7 52 aa11.42□□□□□ -0.58
CSNK1D-203ENST00000392334 SPAG11AQ6PDA7 123 aa11.42□□□□□ -0.58
CSNK1D-203ENST00000392334 PRR26Q8N8Z3 221 aa11.42□□□□□ -0.58
CSNK1D-203ENST00000392334 ATP11AUNQ6ZP68 121 aa11.41□□□□□ -0.58
CSNK1D-203ENST00000392334 TYMSOSQ8TAI1 123 aa11.39□□□□□ -0.59
CSNK1D-203ENST00000392334 CDC42SE1Q9NRR8 79 aa11.39□□□□□ -0.59
CSNK1D-203ENST00000392334 LRP1Q07954 4544 aaKnown RBP11.36□□□□□ -0.59
CSNK1D-203ENST00000392334 KRTAP4-5Q9BYR2 181 aa11.35□□□□□ -0.59
CSNK1D-203ENST00000392334 PKHD1L1Q86WI1 4243 aa11.34□□□□□ -0.59
CSNK1D-203ENST00000392334 FLG2Q5D862 2391 aaPredicted RBP11.34□□□□□ -0.59
CSNK1D-203ENST00000392334 ACYP2P14621 99 aa11.31□□□□□ -0.6
CSNK1D-203ENST00000392334 MYCBP2O75592 4640 aa11.3□□□□□ -0.6
CSNK1D-203ENST00000392334 LINC00313P59037 77 aa11.3□□□□□ -0.6
CSNK1D-203ENST00000392334 SEC61GP60059 68 aa11.29□□□□□ -0.6
CSNK1D-203ENST00000392334 SPTSSBQ8NFR3 76 aa11.28□□□□□ -0.6
CSNK1D-203ENST00000392334 C4orf48Q5BLP8 95 aa11.28□□□□□ -0.6
CSNK1D-203ENST00000392334 DMAC1Q96GE9 116 aa11.28□□□□□ -0.6
CSNK1D-203ENST00000392334 HERC2O95714 4834 aa11.27□□□□□ -0.61
CSNK1D-203ENST00000392334 A6NN06 94 aa11.25□□□□□ -0.61
CSNK1D-203ENST00000392334 KTN1-AS1Q86SY8 53 aa11.25□□□□□ -0.61
CSNK1D-203ENST00000392334 SPINK7P58062 85 aa11.24□□□□□ -0.61
CSNK1D-203ENST00000392334 LINC00304Q8N9R0 145 aa11.23□□□□□ -0.61
CSNK1D-203ENST00000392334 IGKV2-30P06310 120 aa11.22□□□□□ -0.61
CSNK1D-203ENST00000392334 FAT3Q8TDW7 4589 aa11.21□□□□□ -0.61
CSNK1D-203ENST00000392334 ABCA13Q86UQ4 5058 aa11.21□□□□□ -0.61
CSNK1D-203ENST00000392334 KRTAP16-1A8MUX0 517 aa11.18□□□□□ -0.62
CSNK1D-203ENST00000392334 SPINK1P00995 79 aa11.18□□□□□ -0.62
CSNK1D-203ENST00000392334 TNXBP22105 4242 aa11.16□□□□□ -0.62
CSNK1D-203ENST00000392334 KRTAP10-8P60410 259 aa11.09□□□□□ -0.63
CSNK1D-203ENST00000392334 RETNLBQ9BQ08 111 aa11.08□□□□□ -0.64
CSNK1D-203ENST00000392334 MT1HL1P0DM35 61 aa11.05□□□□□ -0.64
CSNK1D-203ENST00000392334 C7orf65Q6ZTY9 151 aa11.04□□□□□ -0.64
CSNK1D-203ENST00000392334 DMBT1Q9UGM3 2413 aaPredicted RBP11.03□□□□□ -0.64
CSNK1D-203ENST00000392334 RPS29P62273 56 aaKnown RBP11.02□□□□□ -0.64
CSNK1D-203ENST00000392334 A0A1B0GU69 56 aa11.01□□□□□ -0.65
CSNK1D-203ENST00000392334 PCLOQ9Y6V0 5065 aa10.99□□□□□ -0.65
CSNK1D-203ENST00000392334 RBM12B-AS1Q9P1G2 102 aa10.96□□□□□ -0.65
CSNK1D-203ENST00000392334 IGKV2D-30A0A075B6S6 120 aa10.96□□□□□ -0.66
CSNK1D-203ENST00000392334 SPATA8Q6RVD6 105 aa10.96□□□□□ -0.66
CSNK1D-203ENST00000392334 C9orf92A6NGG3 77 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms