RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 IGKV4-1P06312 121 aa6.72□□□□□ -1.33
GGPS1-203ENST00000391855 VPS25Q9BRG1 176 aa6.72□□□□□ -1.33
GGPS1-203ENST00000391855 BATFQ16520 125 aa6.71□□□□□ -1.34
GGPS1-203ENST00000391855 C20orf166-AS1Q96NR2 134 aa6.71□□□□□ -1.34
GGPS1-203ENST00000391855 LINC00472Q9H8W2 130 aa6.71□□□□□ -1.34
GGPS1-203ENST00000391855 A8MUU9 505 aa6.69□□□□□ -1.34
GGPS1-203ENST00000391855 PDE6GP18545 87 aa6.69□□□□□ -1.34
GGPS1-203ENST00000391855 LCE4AQ5TA78 99 aa6.69□□□□□ -1.34
GGPS1-203ENST00000391855 A0A1B0GW54 56 aa6.68□□□□□ -1.34
GGPS1-203ENST00000391855 DSCR10P59022 87 aa6.67□□□□□ -1.34
GGPS1-203ENST00000391855 LINC00313P59037 77 aa6.67□□□□□ -1.34
GGPS1-203ENST00000391855 KRTAP19-2Q3LHN2 52 aa6.67□□□□□ -1.34
GGPS1-203ENST00000391855 LOC110117498A0A087WWA1 95 aa6.67□□□□□ -1.34
GGPS1-203ENST00000391855 C9orf118A6NHY6 69 aa6.66□□□□□ -1.34
GGPS1-203ENST00000391855 J3KT08 172 aa6.66□□□□□ -1.34
GGPS1-203ENST00000391855 C8orf87E5RJ46 101 aa6.65□□□□□ -1.35
GGPS1-203ENST00000391855 Q6ZQT0 140 aa6.65□□□□□ -1.35
GGPS1-203ENST00000391855 DEFB116Q30KQ4 102 aa6.64□□□□□ -1.35
GGPS1-203ENST00000391855 H3BT86 120 aa6.63□□□□□ -1.35
GGPS1-203ENST00000391855 TAX1BP3O14907 124 aa6.63□□□□□ -1.35
GGPS1-203ENST00000391855 LCE1DQ5T752 114 aa6.63□□□□□ -1.35
GGPS1-203ENST00000391855 IGHV6-1A0A0B4J1U7 121 aa6.62□□□□□ -1.35
GGPS1-203ENST00000391855 A0A1B0GVX0 72 aa6.62□□□□□ -1.35
GGPS1-203ENST00000391855 A0A1W2PPM0 123 aa6.62□□□□□ -1.35
GGPS1-203ENST00000391855 COX6B2Q6YFQ2 88 aa6.62□□□□□ -1.35
GGPS1-203ENST00000391855 KRTAP16-1A8MUX0 517 aa6.61□□□□□ -1.35
GGPS1-203ENST00000391855 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
GGPS1-203ENST00000391855 C14orf132Q9NPU4 83 aa6.6□□□□□ -1.35
GGPS1-203ENST00000391855 NDUFB1O75438 58 aa6.59□□□□□ -1.35
GGPS1-203ENST00000391855 MT1HP80294 61 aa6.59□□□□□ -1.35
GGPS1-203ENST00000391855 NOTCH2NLQ7Z3S9 236 aa6.57□□□□□ -1.36
GGPS1-203ENST00000391855 A8MWP4 228 aa6.55□□□□□ -1.36
GGPS1-203ENST00000391855 SPCS1Q9Y6A9 102 aa6.55□□□□□ -1.36
GGPS1-203ENST00000391855 COL5A1-AS1Q5SY13 56 aa6.54□□□□□ -1.36
GGPS1-203ENST00000391855 NREPQ16612 68 aa6.53□□□□□ -1.36
GGPS1-203ENST00000391855 MTURNQ8N3F0 131 aa6.52□□□□□ -1.37
GGPS1-203ENST00000391855 M0R2T5 61 aa6.5□□□□□ -1.37
GGPS1-203ENST00000391855 C8orf17Q9NRJ1 99 aa6.5□□□□□ -1.37
GGPS1-203ENST00000391855 IGKV3D-7A0A0C4DH55 119 aa6.49□□□□□ -1.37
GGPS1-203ENST00000391855 Q8N9P0 234 aaPredicted RBP6.49□□□□□ -1.37
GGPS1-203ENST00000391855 PRR15Q8IV56 129 aa6.48□□□□□ -1.37
GGPS1-203ENST00000391855 ZCCHC13Q8WW36 166 aaKnown RBP6.48□□□□□ -1.37
GGPS1-203ENST00000391855 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
GGPS1-203ENST00000391855 K7EP34 96 aa6.46□□□□□ -1.38
GGPS1-203ENST00000391855 KRTAP10-6P60371 365 aaPredicted RBP6.46□□□□□ -1.38
GGPS1-203ENST00000391855 Q6ZVQ6 151 aa6.45□□□□□ -1.38
GGPS1-203ENST00000391855 RBM12B-AS1Q9P1G2 102 aa6.45□□□□□ -1.38
GGPS1-203ENST00000391855 FLGP20930 4061 aaPredicted RBP6.45□□□□□ -1.38
GGPS1-203ENST00000391855 BPY2O14599 106 aa6.43□□□□□ -1.38
GGPS1-203ENST00000391855 TMEM254Q8TBM7 123 aa6.43□□□□□ -1.38
GGPS1-203ENST00000391855 FAM236DA0A1B0GTK5 79 aa6.42□□□□□ -1.38
GGPS1-203ENST00000391855 FAM236CP0DP71 79 aa6.42□□□□□ -1.38
GGPS1-203ENST00000391855 HRES1P13985 223 aa6.42□□□□□ -1.38
GGPS1-203ENST00000391855 MPLKIPQ8TAP9 179 aa6.42□□□□□ -1.38
GGPS1-203ENST00000391855 PRO0461Q9UI25 63 aa6.42□□□□□ -1.38
GGPS1-203ENST00000391855 MMP24-AS1A0A0U1RRL7 71 aa6.42□□□□□ -1.38
GGPS1-203ENST00000391855 GTF2H5Q6ZYL4 71 aa6.42□□□□□ -1.38
GGPS1-203ENST00000391855 MRPL34Q9BQ48 92 aaKnown RBP6.42□□□□□ -1.38
GGPS1-203ENST00000391855 K7EQZ3 153 aa6.41□□□□□ -1.38
GGPS1-203ENST00000391855 hDV103S1A0JD37 113 aa6.39□□□□□ -1.39
GGPS1-203ENST00000391855 KRTAP4-9Q9BYQ8 210 aa6.39□□□□□ -1.39
GGPS1-203ENST00000391855 KRTAP3-1Q9BYR8 98 aa6.39□□□□□ -1.39
GGPS1-203ENST00000391855 PCP4L1A6NKN8 68 aa6.38□□□□□ -1.39
GGPS1-203ENST00000391855 SPINK7P58062 85 aa6.38□□□□□ -1.39
GGPS1-203ENST00000391855 UBL5Q9BZL1 73 aa6.37□□□□□ -1.39
GGPS1-203ENST00000391855 F8W1H4 67 aa6.35□□□□□ -1.39
GGPS1-203ENST00000391855 KRTAP9-3Q9BYQ3 159 aa6.35□□□□□ -1.39
GGPS1-203ENST00000391855 NDUFS5O43920 106 aa6.33□□□□□ -1.4
GGPS1-203ENST00000391855 LINC00846Q9NV44 126 aa6.33□□□□□ -1.4
GGPS1-203ENST00000391855 CASC2Q6XLA1 102 aa6.32□□□□□ -1.4
GGPS1-203ENST00000391855 LCE5AQ5TCM9 118 aa6.31□□□□□ -1.4
GGPS1-203ENST00000391855 WFDC13Q8IUB5 93 aa6.3□□□□□ -1.4
GGPS1-203ENST00000391855 Q8N9L7 120 aa6.3□□□□□ -1.4
GGPS1-203ENST00000391855 ETDBQ3ZM63 59 aa6.28□□□□□ -1.4
GGPS1-203ENST00000391855 HCG22E2RYF7 251 aa6.26□□□□□ -1.41
GGPS1-203ENST00000391855 CXCL6P80162 114 aa6.26□□□□□ -1.41
GGPS1-203ENST00000391855 C7orf65Q6ZTY9 151 aa6.25□□□□□ -1.41
GGPS1-203ENST00000391855 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
GGPS1-203ENST00000391855 CRCT1Q9UGL9 99 aa6.23□□□□□ -1.41
GGPS1-203ENST00000391855 IGKV2D-30A0A075B6S6 120 aa6.22□□□□□ -1.41
GGPS1-203ENST00000391855 IGKV2-30P06310 120 aa6.22□□□□□ -1.41
GGPS1-203ENST00000391855 Q5W150 140 aa6.21□□□□□ -1.42
GGPS1-203ENST00000391855 ACYP1P07311 99 aa6.2□□□□□ -1.42
GGPS1-203ENST00000391855 KRTAP4-11Q9BYQ6 195 aa6.2□□□□□ -1.42
GGPS1-203ENST00000391855 KRTAP23-1A1A580 65 aa6.19□□□□□ -1.42
GGPS1-203ENST00000391855 FAM240AA0A1B0GVK7 77 aa6.17□□□□□ -1.42
GGPS1-203ENST00000391855 MT2AP02795 61 aa6.17□□□□□ -1.42
GGPS1-203ENST00000391855 TP53AIP1Q9HCN2 124 aa6.17□□□□□ -1.42
GGPS1-203ENST00000391855 H1FX-AS1Q4G0G2 97 aa6.16□□□□□ -1.42
GGPS1-203ENST00000391855 KRTAP4-2Q9BYR5 136 aa6.16□□□□□ -1.42
GGPS1-203ENST00000391855 FSIP2Q5CZC0 6907 aa6.15□□□□□ -1.42
GGPS1-203ENST00000391855 ATP5EP2Q5VTU8 51 aa6.15□□□□□ -1.43
GGPS1-203ENST00000391855 MT1FP04733 61 aa6.12□□□□□ -1.43
GGPS1-203ENST00000391855 KRTAP10-10P60014 251 aa6.11□□□□□ -1.43
GGPS1-203ENST00000391855 C4orf26Q17RF5 130 aa6.08□□□□□ -1.44
GGPS1-203ENST00000391855 HIST1H4AP62805 103 aaKnown RBP6.04□□□□□ -1.44
GGPS1-203ENST00000391855 TRAV22A0A0B4J277 110 aa6.03□□□□□ -1.44
GGPS1-203ENST00000391855 A0A1B0GV90 55 aa6.03□□□□□ -1.44
GGPS1-203ENST00000391855 LINC00643Q86TS7 51 aa6.03□□□□□ -1.44
GGPS1-203ENST00000391855 USH2AO75445 5202 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms