RNA–Protein interactions for RNA: ENST00000390392.3

TRBV4-2-201, Transcript of T cell receptor beta variable 4-2, humanhuman

APPRIS P1 BASIC

Gene TRBV4-2, Length 455 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-2-201ENST00000390392 LINC00472Q9H8W2 130 aa6.96□□□□□ -1.3
TRBV4-2-201ENST00000390392 C9JAW5 83 aa6.94□□□□□ -1.3
TRBV4-2-201ENST00000390392 RBM3P98179 157 aaKnown RBP6.93□□□□□ -1.3
TRBV4-2-201ENST00000390392 FLGP20930 4061 aaPredicted RBP6.92□□□□□ -1.3
TRBV4-2-201ENST00000390392 KRTAP16-1A8MUX0 517 aa6.92□□□□□ -1.3
TRBV4-2-201ENST00000390392 DSCR8Q96T75 97 aa6.92□□□□□ -1.3
TRBV4-2-201ENST00000390392 C8orf87E5RJ46 101 aa6.91□□□□□ -1.3
TRBV4-2-201ENST00000390392 BAALC-AS2P0C853 105 aa6.91□□□□□ -1.3
TRBV4-2-201ENST00000390392 RBM12B-AS1Q9P1G2 102 aa6.91□□□□□ -1.3
TRBV4-2-201ENST00000390392 F8W1H4 67 aa6.9□□□□□ -1.3
TRBV4-2-201ENST00000390392 H3BT86 120 aa6.9□□□□□ -1.3
TRBV4-2-201ENST00000390392 J3KT08 172 aa6.89□□□□□ -1.31
TRBV4-2-201ENST00000390392 MTURNQ8N3F0 131 aa6.89□□□□□ -1.31
TRBV4-2-201ENST00000390392 IGHV6-1A0A0B4J1U7 121 aa6.88□□□□□ -1.31
TRBV4-2-201ENST00000390392 A0A1B0GV72 72 aa6.88□□□□□ -1.31
TRBV4-2-201ENST00000390392 DEFB116Q30KQ4 102 aa6.88□□□□□ -1.31
TRBV4-2-201ENST00000390392 FAM236DA0A1B0GTK5 79 aa6.87□□□□□ -1.31
TRBV4-2-201ENST00000390392 A0A1B0GW54 56 aa6.87□□□□□ -1.31
TRBV4-2-201ENST00000390392 FAM236CP0DP71 79 aa6.87□□□□□ -1.31
TRBV4-2-201ENST00000390392 NOTCH2NLQ7Z3S9 236 aa6.87□□□□□ -1.31
TRBV4-2-201ENST00000390392 A0A1B0GVX0 72 aa6.86□□□□□ -1.31
TRBV4-2-201ENST00000390392 VPS25Q9BRG1 176 aa6.86□□□□□ -1.31
TRBV4-2-201ENST00000390392 PRO0461Q9UI25 63 aa6.86□□□□□ -1.31
TRBV4-2-201ENST00000390392 KRTAP9-8Q9BYQ0 159 aa6.85□□□□□ -1.31
TRBV4-2-201ENST00000390392 JMJD7-PLA2G4BH0Y9G9 81 aa6.84□□□□□ -1.31
TRBV4-2-201ENST00000390392 NDUFB1O75438 58 aa6.84□□□□□ -1.31
TRBV4-2-201ENST00000390392 MPLKIPQ8TAP9 179 aa6.83□□□□□ -1.32
TRBV4-2-201ENST00000390392 KRTAP3-3Q9BYR6 98 aa6.83□□□□□ -1.32
TRBV4-2-201ENST00000390392 KRTAP3-2Q9BYR7 98 aa6.83□□□□□ -1.32
TRBV4-2-201ENST00000390392 SMCPP49901 116 aaPredicted RBP6.82□□□□□ -1.32
TRBV4-2-201ENST00000390392 Q6ZQT0 140 aa6.82□□□□□ -1.32
TRBV4-2-201ENST00000390392 HRES1P13985 223 aa6.81□□□□□ -1.32
TRBV4-2-201ENST00000390392 PDE6GP18545 87 aa6.81□□□□□ -1.32
TRBV4-2-201ENST00000390392 ETDBQ3ZM63 59 aa6.79□□□□□ -1.32
TRBV4-2-201ENST00000390392 ZCCHC13Q8WW36 166 aaKnown RBP6.78□□□□□ -1.32
TRBV4-2-201ENST00000390392 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.33
TRBV4-2-201ENST00000390392 LOC110117498A0A087WWA1 95 aa6.76□□□□□ -1.33
TRBV4-2-201ENST00000390392 A8MWP4 228 aa6.74□□□□□ -1.33
TRBV4-2-201ENST00000390392 SPINK7P58062 85 aa6.74□□□□□ -1.33
TRBV4-2-201ENST00000390392 C14orf132Q9NPU4 83 aa6.74□□□□□ -1.33
TRBV4-2-201ENST00000390392 MT2AP02795 61 aa6.71□□□□□ -1.34
TRBV4-2-201ENST00000390392 C8orf17Q9NRJ1 99 aa6.71□□□□□ -1.34
TRBV4-2-201ENST00000390392 J3QR89 54 aa6.7□□□□□ -1.34
TRBV4-2-201ENST00000390392 NREPQ16612 68 aa6.69□□□□□ -1.34
TRBV4-2-201ENST00000390392 KRTAP10-10P60014 251 aa6.68□□□□□ -1.34
TRBV4-2-201ENST00000390392 IGKV3D-7A0A0C4DH55 119 aa6.67□□□□□ -1.34
TRBV4-2-201ENST00000390392 Q6ZVQ6 151 aa6.67□□□□□ -1.34
TRBV4-2-201ENST00000390392 PRR15Q8IV56 129 aa6.67□□□□□ -1.34
TRBV4-2-201ENST00000390392 MT1FP04733 61 aa6.65□□□□□ -1.34
TRBV4-2-201ENST00000390392 K7ERU9 68 aa6.64□□□□□ -1.35
TRBV4-2-201ENST00000390392 KRTAP9-3Q9BYQ3 159 aa6.64□□□□□ -1.35
TRBV4-2-201ENST00000390392 ACYP1P07311 99 aa6.63□□□□□ -1.35
TRBV4-2-201ENST00000390392 TMEM254Q8TBM7 123 aa6.63□□□□□ -1.35
TRBV4-2-201ENST00000390392 MRPL34Q9BQ48 92 aaKnown RBP6.63□□□□□ -1.35
TRBV4-2-201ENST00000390392 FAM240AA0A1B0GVK7 77 aa6.62□□□□□ -1.35
TRBV4-2-201ENST00000390392 WFDC13Q8IUB5 93 aa6.62□□□□□ -1.35
TRBV4-2-201ENST00000390392 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.6□□□□□ -1.35
TRBV4-2-201ENST00000390392 LINC00846Q9NV44 126 aa6.6□□□□□ -1.35
TRBV4-2-201ENST00000390392 LCE2BO14633 110 aa6.59□□□□□ -1.35
TRBV4-2-201ENST00000390392 MMP24-AS1A0A0U1RRL7 71 aa6.58□□□□□ -1.36
TRBV4-2-201ENST00000390392 hDV103S1A0JD37 113 aa6.58□□□□□ -1.36
TRBV4-2-201ENST00000390392 UBL5Q9BZL1 73 aa6.58□□□□□ -1.36
TRBV4-2-201ENST00000390392 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
TRBV4-2-201ENST00000390392 BPY2O14599 106 aa6.55□□□□□ -1.36
TRBV4-2-201ENST00000390392 NDUFS5O43920 106 aa6.54□□□□□ -1.36
TRBV4-2-201ENST00000390392 H1FX-AS1Q4G0G2 97 aa6.54□□□□□ -1.36
TRBV4-2-201ENST00000390392 K7EQZ3 153 aa6.53□□□□□ -1.36
TRBV4-2-201ENST00000390392 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
TRBV4-2-201ENST00000390392 USH2AO75445 5202 aa6.51□□□□□ -1.37
TRBV4-2-201ENST00000390392 LINC00643Q86TS7 51 aa6.49□□□□□ -1.37
TRBV4-2-201ENST00000390392 SSPOA2VEC9 5147 aa6.49□□□□□ -1.37
TRBV4-2-201ENST00000390392 ATP5EP2Q5VTU8 51 aa6.48□□□□□ -1.37
TRBV4-2-201ENST00000390392 C7orf65Q6ZTY9 151 aa6.48□□□□□ -1.37
TRBV4-2-201ENST00000390392 CXCL6P80162 114 aa6.45□□□□□ -1.38
TRBV4-2-201ENST00000390392 CASC2Q6XLA1 102 aa6.45□□□□□ -1.38
TRBV4-2-201ENST00000390392 IGKV2D-30A0A075B6S6 120 aa6.44□□□□□ -1.38
TRBV4-2-201ENST00000390392 IGKV2-30P06310 120 aa6.44□□□□□ -1.38
TRBV4-2-201ENST00000390392 KRTAP19-6Q3LI70 58 aa6.44□□□□□ -1.38
TRBV4-2-201ENST00000390392 Q5W150 140 aa6.44□□□□□ -1.38
TRBV4-2-201ENST00000390392 HCG22E2RYF7 251 aa6.42□□□□□ -1.38
TRBV4-2-201ENST00000390392 HIST1H4AP62805 103 aaKnown RBP6.38□□□□□ -1.39
TRBV4-2-201ENST00000390392 FCGBPQ9Y6R7 5405 aaPredicted RBP6.37□□□□□ -1.39
TRBV4-2-201ENST00000390392 Q8N9L7 120 aa6.37□□□□□ -1.39
TRBV4-2-201ENST00000390392 MT-ATP8P03928 68 aa6.36□□□□□ -1.39
TRBV4-2-201ENST00000390392 C4orf26Q17RF5 130 aa6.35□□□□□ -1.39
TRBV4-2-201ENST00000390392 IMUPQ9GZP8 106 aa6.35□□□□□ -1.39
TRBV4-2-201ENST00000390392 TP53AIP1Q9HCN2 124 aa6.32□□□□□ -1.4
TRBV4-2-201ENST00000390392 A0A087WVE0 104 aa6.29□□□□□ -1.4
TRBV4-2-201ENST00000390392 CSAG1Q6PB30 78 aa6.28□□□□□ -1.4
TRBV4-2-201ENST00000390392 MACF1Q9UPN3 7388 aaKnown RBP6.26□□□□□ -1.41
TRBV4-2-201ENST00000390392 C1orf64Q8NEQ6 169 aa6.26□□□□□ -1.41
TRBV4-2-201ENST00000390392 C5orf47Q569G3 176 aa6.25□□□□□ -1.41
TRBV4-2-201ENST00000390392 S4R3F8 94 aa6.25□□□□□ -1.41
TRBV4-2-201ENST00000390392 FAM236AA0A1B0GUQ0 79 aa6.24□□□□□ -1.41
TRBV4-2-201ENST00000390392 FAM236BA0A1B0GV22 79 aa6.24□□□□□ -1.41
TRBV4-2-201ENST00000390392 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
TRBV4-2-201ENST00000390392 SCGB1A1P11684 91 aa6.23□□□□□ -1.41
TRBV4-2-201ENST00000390392 KRTAP6-3Q3LI67 103 aa6.2□□□□□ -1.42
TRBV4-2-201ENST00000390392 LCA10Q71F78 164 aa6.19□□□□□ -1.42
TRBV4-2-201ENST00000390392 SYNE2Q8WXH0 6885 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms