RNA–Protein interactions for RNA: ENST00000387416.2

MT-TS1-201, Transcript of mitochondrially encoded tRNA serine 1 (UCN), humanhuman

BASIC

Gene MT-TS1, Length 69 nt, Biotype Mt tRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-TS1-201ENST00000387416 MT1HP80294 61 aa4.43□□□□□ -1.7
MT-TS1-201ENST00000387416 DEFB116Q30KQ4 102 aa4.43□□□□□ -1.7
MT-TS1-201ENST00000387416 KRTAP9-2Q9BYQ4 174 aa4.43□□□□□ -1.7
MT-TS1-201ENST00000387416 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
MT-TS1-201ENST00000387416 KRTAP16-1A8MUX0 517 aa4.41□□□□□ -1.7
MT-TS1-201ENST00000387416 H3BT86 120 aa4.41□□□□□ -1.7
MT-TS1-201ENST00000387416 A0A1W2PPM0 123 aa4.4□□□□□ -1.71
MT-TS1-201ENST00000387416 M0R2T5 61 aa4.4□□□□□ -1.71
MT-TS1-201ENST00000387416 C14orf132Q9NPU4 83 aa4.4□□□□□ -1.71
MT-TS1-201ENST00000387416 TAX1BP3O14907 124 aa4.39□□□□□ -1.71
MT-TS1-201ENST00000387416 NOTCH2NLQ7Z3S9 236 aa4.39□□□□□ -1.71
MT-TS1-201ENST00000387416 A8MWP4 228 aa4.38□□□□□ -1.71
MT-TS1-201ENST00000387416 NREPQ16612 68 aa4.38□□□□□ -1.71
MT-TS1-201ENST00000387416 LCE2DQ5TA82 110 aaPredicted RBP4.38□□□□□ -1.71
MT-TS1-201ENST00000387416 KRTAP10-6P60371 365 aaPredicted RBP4.35□□□□□ -1.71
MT-TS1-201ENST00000387416 COL5A1-AS1Q5SY13 56 aa4.35□□□□□ -1.71
MT-TS1-201ENST00000387416 Q8N9P0 234 aaPredicted RBP4.35□□□□□ -1.71
MT-TS1-201ENST00000387416 C8orf17Q9NRJ1 99 aa4.35□□□□□ -1.71
MT-TS1-201ENST00000387416 RBM12B-AS1Q9P1G2 102 aa4.35□□□□□ -1.71
MT-TS1-201ENST00000387416 LORP23490 312 aaPredicted RBP4.34□□□□□ -1.71
MT-TS1-201ENST00000387416 PRR15Q8IV56 129 aa4.34□□□□□ -1.71
MT-TS1-201ENST00000387416 ZCCHC13Q8WW36 166 aaKnown RBP4.34□□□□□ -1.71
MT-TS1-201ENST00000387416 SPCS1Q9Y6A9 102 aa4.34□□□□□ -1.71
MT-TS1-201ENST00000387416 IGKV3D-7A0A0C4DH55 119 aa4.33□□□□□ -1.72
MT-TS1-201ENST00000387416 MTURNQ8N3F0 131 aa4.33□□□□□ -1.72
MT-TS1-201ENST00000387416 FAM236DA0A1B0GTK5 79 aa4.32□□□□□ -1.72
MT-TS1-201ENST00000387416 FAM236CP0DP71 79 aa4.32□□□□□ -1.72
MT-TS1-201ENST00000387416 Q6ZVQ6 151 aa4.32□□□□□ -1.72
MT-TS1-201ENST00000387416 MPLKIPQ8TAP9 179 aa4.31□□□□□ -1.72
MT-TS1-201ENST00000387416 TMEM254Q8TBM7 123 aa4.31□□□□□ -1.72
MT-TS1-201ENST00000387416 BPY2O14599 106 aa4.3□□□□□ -1.72
MT-TS1-201ENST00000387416 HRES1P13985 223 aa4.3□□□□□ -1.72
MT-TS1-201ENST00000387416 SPINK7P58062 85 aa4.29□□□□□ -1.72
MT-TS1-201ENST00000387416 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
MT-TS1-201ENST00000387416 KRTAP9-6A0A140TA67 174 aa4.28□□□□□ -1.72
MT-TS1-201ENST00000387416 hDV103S1A0JD37 113 aa4.28□□□□□ -1.72
MT-TS1-201ENST00000387416 MMP24-AS1A0A0U1RRL7 71 aa4.27□□□□□ -1.73
MT-TS1-201ENST00000387416 K7EP34 96 aa4.27□□□□□ -1.73
MT-TS1-201ENST00000387416 GTF2H5Q6ZYL4 71 aa4.27□□□□□ -1.73
MT-TS1-201ENST00000387416 K7EQZ3 153 aa4.26□□□□□ -1.73
MT-TS1-201ENST00000387416 SMCPP49901 116 aaPredicted RBP4.26□□□□□ -1.73
MT-TS1-201ENST00000387416 UBL5Q9BZL1 73 aa4.26□□□□□ -1.73
MT-TS1-201ENST00000387416 PRO0461Q9UI25 63 aa4.25□□□□□ -1.73
MT-TS1-201ENST00000387416 F8W1H4 67 aa4.24□□□□□ -1.73
MT-TS1-201ENST00000387416 NDUFS5O43920 106 aa4.24□□□□□ -1.73
MT-TS1-201ENST00000387416 WFDC13Q8IUB5 93 aa4.24□□□□□ -1.73
MT-TS1-201ENST00000387416 CASC2Q6XLA1 102 aa4.22□□□□□ -1.73
MT-TS1-201ENST00000387416 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
MT-TS1-201ENST00000387416 CXCL6P80162 114 aa4.21□□□□□ -1.74
MT-TS1-201ENST00000387416 LINC00846Q9NV44 126 aa4.21□□□□□ -1.74
MT-TS1-201ENST00000387416 PCP4L1A6NKN8 68 aa4.2□□□□□ -1.74
MT-TS1-201ENST00000387416 KRTAP9-8Q9BYQ0 159 aa4.2□□□□□ -1.74
MT-TS1-201ENST00000387416 HCG22E2RYF7 251 aa4.18□□□□□ -1.74
MT-TS1-201ENST00000387416 C7orf65Q6ZTY9 151 aa4.18□□□□□ -1.74
MT-TS1-201ENST00000387416 Q8N9L7 120 aa4.18□□□□□ -1.74
MT-TS1-201ENST00000387416 ETDBQ3ZM63 59 aa4.17□□□□□ -1.74
MT-TS1-201ENST00000387416 IGKV2D-30A0A075B6S6 120 aa4.16□□□□□ -1.74
MT-TS1-201ENST00000387416 IGKV2-30P06310 120 aa4.16□□□□□ -1.74
MT-TS1-201ENST00000387416 H1FX-AS1Q4G0G2 97 aa4.16□□□□□ -1.74
MT-TS1-201ENST00000387416 Q5W150 140 aa4.16□□□□□ -1.74
MT-TS1-201ENST00000387416 FSIP2Q5CZC0 6907 aa4.16□□□□□ -1.74
MT-TS1-201ENST00000387416 ACYP1P07311 99 aa4.15□□□□□ -1.75
MT-TS1-201ENST00000387416 TP53AIP1Q9HCN2 124 aa4.15□□□□□ -1.75
MT-TS1-201ENST00000387416 MT2AP02795 61 aa4.14□□□□□ -1.75
MT-TS1-201ENST00000387416 KRTAP10-10P60014 251 aa4.13□□□□□ -1.75
MT-TS1-201ENST00000387416 FAM240AA0A1B0GVK7 77 aa4.1□□□□□ -1.75
MT-TS1-201ENST00000387416 MT1FP04733 61 aa4.09□□□□□ -1.75
MT-TS1-201ENST00000387416 ATP5EP2Q5VTU8 51 aa4.09□□□□□ -1.75
MT-TS1-201ENST00000387416 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
MT-TS1-201ENST00000387416 C4orf26Q17RF5 130 aa4.07□□□□□ -1.76
MT-TS1-201ENST00000387416 C1orf64Q8NEQ6 169 aa4.03□□□□□ -1.76
MT-TS1-201ENST00000387416 TRAV22A0A0B4J277 110 aa4.02□□□□□ -1.77
MT-TS1-201ENST00000387416 LOC101927531A0A1B0GV80 90 aa4.02□□□□□ -1.77
MT-TS1-201ENST00000387416 LCE2BO14633 110 aa4.02□□□□□ -1.77
MT-TS1-201ENST00000387416 HIST1H4AP62805 103 aaKnown RBP4.02□□□□□ -1.77
MT-TS1-201ENST00000387416 LINC00643Q86TS7 51 aa4.02□□□□□ -1.77
MT-TS1-201ENST00000387416 ATOX1O00244 68 aa4.01□□□□□ -1.77
MT-TS1-201ENST00000387416 UQCRQO14949 82 aa4.01□□□□□ -1.77
MT-TS1-201ENST00000387416 CSAG1Q6PB30 78 aa4.01□□□□□ -1.77
MT-TS1-201ENST00000387416 CYP4F30PQ9H0H9 118 aa4.01□□□□□ -1.77
MT-TS1-201ENST00000387416 KRTAP3-1Q9BYR8 98 aa4□□□□□ -1.77
MT-TS1-201ENST00000387416 S4R3F8 94 aa4□□□□□ -1.77
MT-TS1-201ENST00000387416 USH2AO75445 5202 aa4□□□□□ -1.77
MT-TS1-201ENST00000387416 J3QR89 54 aa3.99□□□□□ -1.77
MT-TS1-201ENST00000387416 A0A1B0GV90 55 aa3.97□□□□□ -1.77
MT-TS1-201ENST00000387416 C5orf47Q569G3 176 aa3.96□□□□□ -1.78
MT-TS1-201ENST00000387416 SSPOA2VEC9 5147 aa3.96□□□□□ -1.78
MT-TS1-201ENST00000387416 H0Y9P7 68 aa3.95□□□□□ -1.78
MT-TS1-201ENST00000387416 FAM236AA0A1B0GUQ0 79 aa3.94□□□□□ -1.78
MT-TS1-201ENST00000387416 FAM236BA0A1B0GV22 79 aa3.94□□□□□ -1.78
MT-TS1-201ENST00000387416 LCA10Q71F78 164 aa3.94□□□□□ -1.78
MT-TS1-201ENST00000387416 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
MT-TS1-201ENST00000387416 MP68P56378 58 aa3.93□□□□□ -1.78
MT-TS1-201ENST00000387416 KRTAP19-6Q3LI70 58 aa3.93□□□□□ -1.78
MT-TS1-201ENST00000387416 A0A087WVE0 104 aa3.92□□□□□ -1.78
MT-TS1-201ENST00000387416 A8MUN3 132 aa3.92□□□□□ -1.78
MT-TS1-201ENST00000387416 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.9□□□□□ -1.79
MT-TS1-201ENST00000387416 LINC00208Q96KT6 92 aa3.9□□□□□ -1.79
MT-TS1-201ENST00000387416 OCR1Q9BZK8 76 aa3.9□□□□□ -1.79
MT-TS1-201ENST00000387416 H3BPC8 53 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms