RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 HIVEP1P15822 2718 aa7.59□□□□□ -1.19
ABCA3-202ENST00000382381 A0A087X002 238 aa7.58□□□□□ -1.2
ABCA3-202ENST00000382381 PLAC4Q8WY50 150 aa7.58□□□□□ -1.2
ABCA3-202ENST00000382381 SPRR1BP22528 89 aa7.57□□□□□ -1.2
ABCA3-202ENST00000382381 NOTCH2NLQ7Z3S9 236 aa7.56□□□□□ -1.2
ABCA3-202ENST00000382381 Q6ZR54 194 aa7.55□□□□□ -1.2
ABCA3-202ENST00000382381 WDFY3Q8IZQ1 3526 aa7.55□□□□□ -1.2
ABCA3-202ENST00000382381 LOC400499M0QZD8 3231 aa7.54□□□□□ -1.2
ABCA3-202ENST00000382381 A8MU10 97 aa7.49□□□□□ -1.21
ABCA3-202ENST00000382381 APCP25054 2843 aa7.48□□□□□ -1.21
ABCA3-202ENST00000382381 KRTAP21-3Q3LHN1 58 aa7.46□□□□□ -1.21
ABCA3-202ENST00000382381 KRTAP11-1Q8IUC1 163 aa7.45□□□□□ -1.22
ABCA3-202ENST00000382381 TENM4Q6N022 2769 aa7.42□□□□□ -1.22
ABCA3-202ENST00000382381 ASPMQ8IZT6 3477 aa7.39□□□□□ -1.23
ABCA3-202ENST00000382381 KRTAP4-16G5E9R7 235 aaPredicted RBP7.39□□□□□ -1.23
ABCA3-202ENST00000382381 DCHS1Q96JQ0 3298 aa7.39□□□□□ -1.23
ABCA3-202ENST00000382381 RELNP78509 3460 aa7.39□□□□□ -1.23
ABCA3-202ENST00000382381 KRTAP29-1A8MX34 341 aaPredicted RBP7.37□□□□□ -1.23
ABCA3-202ENST00000382381 C20orf166-AS1Q96NR2 134 aa7.36□□□□□ -1.23
ABCA3-202ENST00000382381 LAMA5O15230 3695 aa7.35□□□□□ -1.23
ABCA3-202ENST00000382381 A8MUU9 505 aa7.34□□□□□ -1.23
ABCA3-202ENST00000382381 DMDP11532 3685 aa7.32□□□□□ -1.24
ABCA3-202ENST00000382381 CELSR2Q9HCU4 2923 aa7.31□□□□□ -1.24
ABCA3-202ENST00000382381 Q6ZRN7 208 aaPredicted RBP7.31□□□□□ -1.24
ABCA3-202ENST00000382381 ZANQ9Y493 2812 aa7.29□□□□□ -1.24
ABCA3-202ENST00000382381 MUC3AQ02505 3323 aa7.26□□□□□ -1.25
ABCA3-202ENST00000382381 ZFHX4Q86UP3 3567 aa7.25□□□□□ -1.25
ABCA3-202ENST00000382381 NIPBLQ6KC79 2804 aaeCLIP7.24□□□□□ -1.25
ABCA3-202ENST00000382381 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
ABCA3-202ENST00000382381 NBPF19A0A087WUL8 3843 aa7.24□□□□□ -1.25
ABCA3-202ENST00000382381 NDUFAF8A1L188 74 aa7.24□□□□□ -1.25
ABCA3-202ENST00000382381 DCHS2Q6V1P9 2916 aa7.24□□□□□ -1.25
ABCA3-202ENST00000382381 KRTAP13-2Q52LG2 175 aa7.23□□□□□ -1.25
ABCA3-202ENST00000382381 KRTAP16-1A8MUX0 517 aa7.22□□□□□ -1.25
ABCA3-202ENST00000382381 HRNRQ86YZ3 2850 aaPredicted RBP7.22□□□□□ -1.25
ABCA3-202ENST00000382381 CSMD1Q96PZ7 3565 aa7.21□□□□□ -1.25
ABCA3-202ENST00000382381 KRTAP25-1Q3LHN0 102 aa7.21□□□□□ -1.26
ABCA3-202ENST00000382381 C10orf95Q9H7T3 257 aa7.17□□□□□ -1.26
ABCA3-202ENST00000382381 A6NN06 94 aa7.17□□□□□ -1.26
ABCA3-202ENST00000382381 A0A1B0GVY2 172 aa7.14□□□□□ -1.27
ABCA3-202ENST00000382381 NF1P21359 2839 aa7.12□□□□□ -1.27
ABCA3-202ENST00000382381 FBN2P35556 2912 aa7.12□□□□□ -1.27
ABCA3-202ENST00000382381 TNP1P09430 55 aa7.06□□□□□ -1.28
ABCA3-202ENST00000382381 TENM3Q9P273 2699 aa7.06□□□□□ -1.28
ABCA3-202ENST00000382381 KRTAP10-8P60410 259 aa7.05□□□□□ -1.28
ABCA3-202ENST00000382381 ASB16-AS1Q495Z4 193 aa7.04□□□□□ -1.28
ABCA3-202ENST00000382381 ZFHX3Q15911 3703 aa7.01□□□□□ -1.29
ABCA3-202ENST00000382381 KRTAP13-1Q8IUC0 172 aa7.01□□□□□ -1.29
ABCA3-202ENST00000382381 TENM2Q9NT68 2774 aa7□□□□□ -1.29
ABCA3-202ENST00000382381 TENM1Q9UKZ4 2725 aa6.99□□□□□ -1.29
ABCA3-202ENST00000382381 SMG1Q96Q15 3661 aaKnown RBP6.99□□□□□ -1.29
ABCA3-202ENST00000382381 RPS29P62273 56 aaKnown RBP6.99□□□□□ -1.29
ABCA3-202ENST00000382381 CELSR1Q9NYQ6 3014 aa6.95□□□□□ -1.3
ABCA3-202ENST00000382381 MXRA5Q9NR99 2828 aa6.93□□□□□ -1.3
ABCA3-202ENST00000382381 CUBNO60494 3623 aa6.92□□□□□ -1.3
ABCA3-202ENST00000382381 PKD1L1Q8TDX9 2849 aa6.91□□□□□ -1.3
ABCA3-202ENST00000382381 SVEP1Q4LDE5 3571 aa6.9□□□□□ -1.3
ABCA3-202ENST00000382381 PDZD2O15018 2839 aa6.88□□□□□ -1.31
ABCA3-202ENST00000382381 CSMD2Q7Z408 3487 aa6.85□□□□□ -1.31
ABCA3-202ENST00000382381 XP32Q5T750 250 aa6.85□□□□□ -1.31
ABCA3-202ENST00000382381 VWFP04275 2813 aa6.83□□□□□ -1.32
ABCA3-202ENST00000382381 KRTAP10-10P60014 251 aa6.82□□□□□ -1.32
ABCA3-202ENST00000382381 SPENQ96T58 3664 aaKnown RBP6.81□□□□□ -1.32
ABCA3-202ENST00000382381 OTOGQ6ZRI0 2925 aa6.79□□□□□ -1.32
ABCA3-202ENST00000382381 KRTAP1-4P0C5Y4 121 aa6.77□□□□□ -1.33
ABCA3-202ENST00000382381 H0YAA0 97 aa6.76□□□□□ -1.33
ABCA3-202ENST00000382381 TGP01266 2768 aa6.72□□□□□ -1.33
ABCA3-202ENST00000382381 P0C880 135 aa6.71□□□□□ -1.34
ABCA3-202ENST00000382381 FBN1P35555 2871 aaKnown RBP6.7□□□□□ -1.34
ABCA3-202ENST00000382381 ANK3Q12955 4377 aaKnown RBP6.69□□□□□ -1.34
ABCA3-202ENST00000382381 SRRM2Q9UQ35 2752 aaKnown RBP6.68□□□□□ -1.34
ABCA3-202ENST00000382381 PP632Q6XCG6 107 aa6.63□□□□□ -1.35
ABCA3-202ENST00000382381 BSNQ9UPA5 3926 aa6.62□□□□□ -1.35
ABCA3-202ENST00000382381 TPRXLQ17RH7 258 aa6.57□□□□□ -1.36
ABCA3-202ENST00000382381 PRO2289Q9P1D8 64 aa6.54□□□□□ -1.36
ABCA3-202ENST00000382381 TRRAPQ9Y4A5 3859 aa6.53□□□□□ -1.36
ABCA3-202ENST00000382381 KRTAP13-3Q3SY46 172 aa6.52□□□□□ -1.37
ABCA3-202ENST00000382381 KRTAP12-2P59991 146 aa6.43□□□□□ -1.38
ABCA3-202ENST00000382381 VPS13CQ709C8 3753 aa6.3□□□□□ -1.4
ABCA3-202ENST00000382381 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
ABCA3-202ENST00000382381 HUWE1Q7Z6Z7 4374 aaKnown RBP6.24□□□□□ -1.41
ABCA3-202ENST00000382381 COL7A1Q02388 2944 aa6.22□□□□□ -1.41
ABCA3-202ENST00000382381 KRTAP12-1P59990 96 aa6.21□□□□□ -1.42
ABCA3-202ENST00000382381 ZNF469Q96JG9 3925 aaPredicted RBP6.19□□□□□ -1.42
ABCA3-202ENST00000382381 FBN3Q75N90 2809 aa6.18□□□□□ -1.42
ABCA3-202ENST00000382381 KRTAP13-4Q3LI77 160 aa6.18□□□□□ -1.42
ABCA3-202ENST00000382381 AKAP9Q99996 3911 aa6.18□□□□□ -1.42
ABCA3-202ENST00000382381 CRCT1Q9UGL9 99 aa6.17□□□□□ -1.42
ABCA3-202ENST00000382381 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
ABCA3-202ENST00000382381 MEGF8Q7Z7M0 2845 aa6.14□□□□□ -1.43
ABCA3-202ENST00000382381 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
ABCA3-202ENST00000382381 CSMD3Q7Z407 3707 aa6.08□□□□□ -1.44
ABCA3-202ENST00000382381 MT1HL1P0DM35 61 aa6.07□□□□□ -1.44
ABCA3-202ENST00000382381 ALMS1Q8TCU4 4167 aa5.98□□□□□ -1.45
ABCA3-202ENST00000382381 DNAH9Q9NYC9 4486 aa5.95□□□□□ -1.46
ABCA3-202ENST00000382381 KRTAP10-6P60371 365 aaPredicted RBP5.93□□□□□ -1.46
ABCA3-202ENST00000382381 KRTAP10-4P60372 401 aaPredicted RBP5.88□□□□□ -1.47
ABCA3-202ENST00000382381 DNHD1Q96M86 4753 aa5.83□□□□□ -1.48
ABCA3-202ENST00000382381 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
ABCA3-202ENST00000382381 DNAH5Q8TE73 4624 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms