RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 ZZEF1O43149 2961 aa3.18□□□□□ -1.9
GEN1-202ENST00000381254 CAMK2N1Q7Z7J9 78 aa3.18□□□□□ -1.9
GEN1-202ENST00000381254 NIPBLQ6KC79 2804 aaeCLIP3.17□□□□□ -1.9
GEN1-202ENST00000381254 DMBT1Q9UGM3 2413 aaPredicted RBP3.16□□□□□ -1.9
GEN1-202ENST00000381254 TENM2Q9NT68 2774 aa3.16□□□□□ -1.9
GEN1-202ENST00000381254 FLG2Q5D862 2391 aaPredicted RBP3.16□□□□□ -1.9
GEN1-202ENST00000381254 R4GN34 69 aa3.16□□□□□ -1.9
GEN1-202ENST00000381254 PP632Q6XCG6 107 aa3.15□□□□□ -1.91
GEN1-202ENST00000381254 A8MUU9 505 aa3.14□□□□□ -1.91
GEN1-202ENST00000381254 LRBAP50851 2863 aa3.14□□□□□ -1.91
GEN1-202ENST00000381254 C20orf166-AS1Q96NR2 134 aa3.14□□□□□ -1.91
GEN1-202ENST00000381254 PRRC2CQ9Y520 2896 aaKnown RBP3.14□□□□□ -1.91
GEN1-202ENST00000381254 MXRA5Q9NR99 2828 aa3.14□□□□□ -1.91
GEN1-202ENST00000381254 FBN1P35555 2871 aaKnown RBP3.14□□□□□ -1.91
GEN1-202ENST00000381254 MUC3AQ02505 3323 aa3.13□□□□□ -1.91
GEN1-202ENST00000381254 ATMQ13315 3056 aa3.13□□□□□ -1.91
GEN1-202ENST00000381254 KRTAP4-5Q9BYR2 181 aa3.12□□□□□ -1.91
GEN1-202ENST00000381254 NBPF19A0A087WUL8 3843 aa3.11□□□□□ -1.91
GEN1-202ENST00000381254 XIRP2A4UGR9 3374 aa3.11□□□□□ -1.91
GEN1-202ENST00000381254 TPRXLQ17RH7 258 aa3.11□□□□□ -1.91
GEN1-202ENST00000381254 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
GEN1-202ENST00000381254 CELSR2Q9HCU4 2923 aa3.1□□□□□ -1.91
GEN1-202ENST00000381254 KRTAP7-1Q8IUC3 87 aa3.1□□□□□ -1.91
GEN1-202ENST00000381254 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
GEN1-202ENST00000381254 A0A0D9SG42 100 aa3.09□□□□□ -1.91
GEN1-202ENST00000381254 SPEGQ15772 3267 aa3.07□□□□□ -1.92
GEN1-202ENST00000381254 BIRC6Q9NR09 4857 aa3.06□□□□□ -1.92
GEN1-202ENST00000381254 ADGRG4Q8IZF6 3080 aa3.06□□□□□ -1.92
GEN1-202ENST00000381254 TACC2O95359 2948 aa3.05□□□□□ -1.92
GEN1-202ENST00000381254 KRTAP13-2Q52LG2 175 aa3.05□□□□□ -1.92
GEN1-202ENST00000381254 ALMS1Q8TCU4 4167 aa3.05□□□□□ -1.92
GEN1-202ENST00000381254 KRTAP10-8P60410 259 aa3.04□□□□□ -1.92
GEN1-202ENST00000381254 PKD1L1Q8TDX9 2849 aa3.03□□□□□ -1.92
GEN1-202ENST00000381254 ZFHX3Q15911 3703 aa3.03□□□□□ -1.92
GEN1-202ENST00000381254 ZFHX4Q86UP3 3567 aa3.03□□□□□ -1.93
GEN1-202ENST00000381254 PLAC4Q8WY50 150 aa3.02□□□□□ -1.93
GEN1-202ENST00000381254 KRTAP11-1Q8IUC1 163 aa3.02□□□□□ -1.93
GEN1-202ENST00000381254 DNHD1Q96M86 4753 aa3.02□□□□□ -1.93
GEN1-202ENST00000381254 DNAH14Q0VDD8 3507 aa3.01□□□□□ -1.93
GEN1-202ENST00000381254 VPS13AQ96RL7 3174 aa3.01□□□□□ -1.93
GEN1-202ENST00000381254 KRTAP16-1A8MUX0 517 aa3.01□□□□□ -1.93
GEN1-202ENST00000381254 ADM2Q7Z4H4 148 aa3.01□□□□□ -1.93
GEN1-202ENST00000381254 TNP1P09430 55 aa3.01□□□□□ -1.93
GEN1-202ENST00000381254 ANK3Q12955 4377 aaKnown RBP3□□□□□ -1.93
GEN1-202ENST00000381254 LAMA1P25391 3075 aa2.99□□□□□ -1.93
GEN1-202ENST00000381254 TENM3Q9P273 2699 aa2.98□□□□□ -1.93
GEN1-202ENST00000381254 KRTAP1-4P0C5Y4 121 aa2.97□□□□□ -1.93
GEN1-202ENST00000381254 FREM2Q5SZK8 3169 aa2.97□□□□□ -1.93
GEN1-202ENST00000381254 A8MU10 97 aa2.97□□□□□ -1.93
GEN1-202ENST00000381254 H0YAA0 97 aa2.97□□□□□ -1.93
GEN1-202ENST00000381254 KRTAP10-10P60014 251 aa2.96□□□□□ -1.94
GEN1-202ENST00000381254 KRTAP13-3Q3SY46 172 aa2.96□□□□□ -1.94
GEN1-202ENST00000381254 TGP01266 2768 aa2.96□□□□□ -1.94
GEN1-202ENST00000381254 TENM1Q9UKZ4 2725 aa2.96□□□□□ -1.94
GEN1-202ENST00000381254 NBEAL2Q6ZNJ1 2754 aa2.95□□□□□ -1.94
GEN1-202ENST00000381254 MYO15AQ9UKN7 3530 aa2.94□□□□□ -1.94
GEN1-202ENST00000381254 KRTAP9-6A0A140TA67 174 aa2.93□□□□□ -1.94
GEN1-202ENST00000381254 MEGF8Q7Z7M0 2845 aa2.93□□□□□ -1.94
GEN1-202ENST00000381254 DCHS2Q6V1P9 2916 aa2.93□□□□□ -1.94
GEN1-202ENST00000381254 WDFY3Q8IZQ1 3526 aa2.93□□□□□ -1.94
GEN1-202ENST00000381254 MT1HL1P0DM35 61 aa2.91□□□□□ -1.94
GEN1-202ENST00000381254 BOD1L1Q8NFC6 3051 aa2.9□□□□□ -1.95
GEN1-202ENST00000381254 XP32Q5T750 250 aa2.9□□□□□ -1.95
GEN1-202ENST00000381254 P0C880 135 aa2.88□□□□□ -1.95
GEN1-202ENST00000381254 ANK2Q01484 3957 aa2.88□□□□□ -1.95
GEN1-202ENST00000381254 SMG1Q96Q15 3661 aaKnown RBP2.88□□□□□ -1.95
GEN1-202ENST00000381254 AKAP9Q99996 3911 aa2.87□□□□□ -1.95
GEN1-202ENST00000381254 LOC400499M0QZD8 3231 aa2.87□□□□□ -1.95
GEN1-202ENST00000381254 KRTAP9-2Q9BYQ4 174 aa2.86□□□□□ -1.95
GEN1-202ENST00000381254 HRNRQ86YZ3 2850 aaPredicted RBP2.85□□□□□ -1.95
GEN1-202ENST00000381254 DMDP11532 3685 aa2.85□□□□□ -1.95
GEN1-202ENST00000381254 VWFP04275 2813 aa2.85□□□□□ -1.95
GEN1-202ENST00000381254 PRO2289Q9P1D8 64 aa2.85□□□□□ -1.95
GEN1-202ENST00000381254 CELSR1Q9NYQ6 3014 aa2.85□□□□□ -1.95
GEN1-202ENST00000381254 ZANQ9Y493 2812 aa2.84□□□□□ -1.95
GEN1-202ENST00000381254 DYNC2H1Q8NCM8 4307 aaKnown RBP2.83□□□□□ -1.96
GEN1-202ENST00000381254 CELSR3Q9NYQ7 3312 aa2.82□□□□□ -1.96
GEN1-202ENST00000381254 DNAH1Q9P2D7 4330 aa2.82□□□□□ -1.96
GEN1-202ENST00000381254 CRCT1Q9UGL9 99 aa2.82□□□□□ -1.96
GEN1-202ENST00000381254 NDUFAF8A1L188 74 aa2.81□□□□□ -1.96
GEN1-202ENST00000381254 RYR3Q15413 4870 aa2.81□□□□□ -1.96
GEN1-202ENST00000381254 KRTAP23-1A1A580 65 aa2.79□□□□□ -1.96
GEN1-202ENST00000381254 HERC2O95714 4834 aa2.78□□□□□ -1.96
GEN1-202ENST00000381254 KRTAP13-4Q3LI77 160 aa2.76□□□□□ -1.97
GEN1-202ENST00000381254 HUWE1Q7Z6Z7 4374 aaKnown RBP2.74□□□□□ -1.97
GEN1-202ENST00000381254 KRTAP10-4P60372 401 aaPredicted RBP2.74□□□□□ -1.97
GEN1-202ENST00000381254 RELNP78509 3460 aa2.74□□□□□ -1.97
GEN1-202ENST00000381254 DNAH11Q96DT5 4516 aa2.73□□□□□ -1.97
GEN1-202ENST00000381254 RYR2Q92736 4967 aa2.73□□□□□ -1.97
GEN1-202ENST00000381254 DNAH9Q9NYC9 4486 aa2.72□□□□□ -1.97
GEN1-202ENST00000381254 ASPMQ8IZT6 3477 aa2.72□□□□□ -1.97
GEN1-202ENST00000381254 CSMD1Q96PZ7 3565 aa2.71□□□□□ -1.97
GEN1-202ENST00000381254 LAMA5O15230 3695 aa2.71□□□□□ -1.98
GEN1-202ENST00000381254 LORP23490 312 aaPredicted RBP2.71□□□□□ -1.98
GEN1-202ENST00000381254 BSNQ9UPA5 3926 aa2.7□□□□□ -1.98
GEN1-202ENST00000381254 CSMD2Q7Z408 3487 aa2.7□□□□□ -1.98
GEN1-202ENST00000381254 SPENQ96T58 3664 aaKnown RBP2.69□□□□□ -1.98
GEN1-202ENST00000381254 C10orf95Q9H7T3 257 aa2.68□□□□□ -1.98
GEN1-202ENST00000381254 COL7A1Q02388 2944 aa2.67□□□□□ -1.98
GEN1-202ENST00000381254 LCE2DQ5TA82 110 aaPredicted RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms