RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 LOC101927531A0A1B0GV80 90 aa7.4□□□□□ -1.22
PUDP-201ENST00000381077 NDUFS5O43920 106 aa7.4□□□□□ -1.22
PUDP-201ENST00000381077 PRR4Q16378 134 aa7.4□□□□□ -1.22
PUDP-201ENST00000381077 FRAS1Q86XX4 4008 aa7.39□□□□□ -1.23
PUDP-201ENST00000381077 ALMS1Q8TCU4 4167 aa7.38□□□□□ -1.23
PUDP-201ENST00000381077 MEGF8Q7Z7M0 2845 aa7.38□□□□□ -1.23
PUDP-201ENST00000381077 LIMD2Q9BT23 127 aa7.37□□□□□ -1.23
PUDP-201ENST00000381077 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
PUDP-201ENST00000381077 A0A087X002 238 aa7.36□□□□□ -1.23
PUDP-201ENST00000381077 NOTCH2NLQ7Z3S9 236 aa7.36□□□□□ -1.23
PUDP-201ENST00000381077 KRTAP13-3Q3SY46 172 aa7.35□□□□□ -1.23
PUDP-201ENST00000381077 SPINK6Q6UWN8 80 aa7.35□□□□□ -1.23
PUDP-201ENST00000381077 DNAH11Q96DT5 4516 aa7.34□□□□□ -1.23
PUDP-201ENST00000381077 KRTAP13-2Q52LG2 175 aa7.33□□□□□ -1.24
PUDP-201ENST00000381077 COA5Q86WW8 74 aa7.33□□□□□ -1.24
PUDP-201ENST00000381077 DNAH5Q8TE73 4624 aa7.33□□□□□ -1.24
PUDP-201ENST00000381077 FBN3Q75N90 2809 aa7.33□□□□□ -1.24
PUDP-201ENST00000381077 LINC00313P59037 77 aa7.32□□□□□ -1.24
PUDP-201ENST00000381077 PCOTHQ58A44 107 aa7.32□□□□□ -1.24
PUDP-201ENST00000381077 Q8N9P0 234 aaPredicted RBP7.32□□□□□ -1.24
PUDP-201ENST00000381077 BRK1Q8WUW1 75 aa7.32□□□□□ -1.24
PUDP-201ENST00000381077 FAM229AH3BQW9 127 aa7.31□□□□□ -1.24
PUDP-201ENST00000381077 DNHD1Q96M86 4753 aa7.31□□□□□ -1.24
PUDP-201ENST00000381077 KRTAP1-4P0C5Y4 121 aa7.31□□□□□ -1.24
PUDP-201ENST00000381077 TGP01266 2768 aa7.29□□□□□ -1.24
PUDP-201ENST00000381077 RPS29P62273 56 aaKnown RBP7.27□□□□□ -1.25
PUDP-201ENST00000381077 SPINK1P00995 79 aa7.27□□□□□ -1.25
PUDP-201ENST00000381077 Q5W150 140 aa7.27□□□□□ -1.25
PUDP-201ENST00000381077 PSPHP1O15172 72 aa7.25□□□□□ -1.25
PUDP-201ENST00000381077 A8MUN3 132 aa7.24□□□□□ -1.25
PUDP-201ENST00000381077 Q5VV11 94 aa7.24□□□□□ -1.25
PUDP-201ENST00000381077 LINC01558Q9Y6Z2 57 aa7.23□□□□□ -1.25
PUDP-201ENST00000381077 KRTAP16-1A8MUX0 517 aa7.22□□□□□ -1.25
PUDP-201ENST00000381077 PKD1P98161 4303 aa7.22□□□□□ -1.25
PUDP-201ENST00000381077 FAT2Q9NYQ8 4349 aa7.22□□□□□ -1.25
PUDP-201ENST00000381077 PLA2G1BP04054 148 aaKnown RBP7.22□□□□□ -1.25
PUDP-201ENST00000381077 HRES1P13985 223 aa7.22□□□□□ -1.25
PUDP-201ENST00000381077 SPAG11AQ6PDA7 123 aa7.22□□□□□ -1.25
PUDP-201ENST00000381077 Q75L30 129 aa7.22□□□□□ -1.25
PUDP-201ENST00000381077 TYMSOSQ8TAI1 123 aa7.22□□□□□ -1.25
PUDP-201ENST00000381077 ACYP2P14621 99 aa7.21□□□□□ -1.25
PUDP-201ENST00000381077 IGKV2-30P06310 120 aa7.21□□□□□ -1.26
PUDP-201ENST00000381077 DMAC1Q96GE9 116 aa7.19□□□□□ -1.26
PUDP-201ENST00000381077 PRR15LQ9BU68 103 aa7.18□□□□□ -1.26
PUDP-201ENST00000381077 LRP1BQ9NZR2 4599 aa7.17□□□□□ -1.26
PUDP-201ENST00000381077 CHKB-CPT1BH3BT56 60 aa7.15□□□□□ -1.26
PUDP-201ENST00000381077 PRR26Q8N8Z3 221 aa7.15□□□□□ -1.26
PUDP-201ENST00000381077 LINC00304Q8N9R0 145 aa7.13□□□□□ -1.27
PUDP-201ENST00000381077 VPS13BQ7Z7G8 4022 aa7.12□□□□□ -1.27
PUDP-201ENST00000381077 HYDINQ4G0P3 5121 aa7.12□□□□□ -1.27
PUDP-201ENST00000381077 A0A1B0GVY2 172 aa7.09□□□□□ -1.28
PUDP-201ENST00000381077 A6NED7 52 aa7.07□□□□□ -1.28
PUDP-201ENST00000381077 CDC42SE1Q9NRR8 79 aa7.06□□□□□ -1.28
PUDP-201ENST00000381077 ATP11AUNQ6ZP68 121 aa7.05□□□□□ -1.28
PUDP-201ENST00000381077 SACSQ9NZJ4 4579 aa7.05□□□□□ -1.28
PUDP-201ENST00000381077 C7orf65Q6ZTY9 151 aa7.03□□□□□ -1.28
PUDP-201ENST00000381077 IGKV2D-30A0A075B6S6 120 aa7.03□□□□□ -1.28
PUDP-201ENST00000381077 J3QL48 77 aa7.02□□□□□ -1.29
PUDP-201ENST00000381077 KRTAP10-4P60372 401 aaPredicted RBP7.02□□□□□ -1.29
PUDP-201ENST00000381077 RETNLBQ9BQ08 111 aa7.02□□□□□ -1.29
PUDP-201ENST00000381077 LCA10Q71F78 164 aa7□□□□□ -1.29
PUDP-201ENST00000381077 C20orf166-AS1Q96NR2 134 aa7□□□□□ -1.29
PUDP-201ENST00000381077 A8MUU9 505 aa6.98□□□□□ -1.29
PUDP-201ENST00000381077 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
PUDP-201ENST00000381077 KRTAP3-2Q9BYR7 98 aa6.97□□□□□ -1.29
PUDP-201ENST00000381077 PMAIP1Q13794 54 aa6.96□□□□□ -1.3
PUDP-201ENST00000381077 SMR3BP02814 79 aaPredicted RBP6.95□□□□□ -1.3
PUDP-201ENST00000381077 A0A1B0GU69 56 aa6.94□□□□□ -1.3
PUDP-201ENST00000381077 LCE2DQ5TA82 110 aaPredicted RBP6.94□□□□□ -1.3
PUDP-201ENST00000381077 PKHD1P08F94 4074 aa6.93□□□□□ -1.3
PUDP-201ENST00000381077 SPINK7P58062 85 aa6.93□□□□□ -1.3
PUDP-201ENST00000381077 A8MU10 97 aa6.92□□□□□ -1.3
PUDP-201ENST00000381077 PKHD1L1Q86WI1 4243 aa6.92□□□□□ -1.3
PUDP-201ENST00000381077 DYNC1H1Q14204 4646 aaKnown RBP6.92□□□□□ -1.3
PUDP-201ENST00000381077 SPTSSBQ8NFR3 76 aa6.9□□□□□ -1.3
PUDP-201ENST00000381077 APOBP04114 4563 aaKnown RBP6.89□□□□□ -1.31
PUDP-201ENST00000381077 A6NN06 94 aa6.86□□□□□ -1.31
PUDP-201ENST00000381077 UQCR11O14957 56 aa6.85□□□□□ -1.31
PUDP-201ENST00000381077 SPATA8Q6RVD6 105 aa6.85□□□□□ -1.31
PUDP-201ENST00000381077 KTN1-AS1Q86SY8 53 aa6.85□□□□□ -1.31
PUDP-201ENST00000381077 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
PUDP-201ENST00000381077 SEC61GP60059 68 aa6.8□□□□□ -1.32
PUDP-201ENST00000381077 KRTAP10-8P60410 259 aa6.79□□□□□ -1.32
PUDP-201ENST00000381077 Q8N1X5 172 aa6.79□□□□□ -1.32
PUDP-201ENST00000381077 MIR22HGQ0VDD5 57 aa6.77□□□□□ -1.33
PUDP-201ENST00000381077 FAT1Q14517 4588 aa6.77□□□□□ -1.33
PUDP-201ENST00000381077 RYR2Q92736 4967 aa6.76□□□□□ -1.33
PUDP-201ENST00000381077 FLG2Q5D862 2391 aaPredicted RBP6.73□□□□□ -1.33
PUDP-201ENST00000381077 COX6B2Q6YFQ2 88 aa6.73□□□□□ -1.33
PUDP-201ENST00000381077 Q5VSD8 79 aa6.72□□□□□ -1.33
PUDP-201ENST00000381077 KRTAP3-1Q9BYR8 98 aa6.71□□□□□ -1.33
PUDP-201ENST00000381077 RPL37P61927 97 aaKnown RBP6.68□□□□□ -1.34
PUDP-201ENST00000381077 TNXBP22105 4242 aa6.64□□□□□ -1.35
PUDP-201ENST00000381077 FAT3Q8TDW7 4589 aa6.61□□□□□ -1.35
PUDP-201ENST00000381077 KMT2CQ8NEZ4 4911 aaKnown RBP6.6□□□□□ -1.35
PUDP-201ENST00000381077 XP32Q5T750 250 aa6.59□□□□□ -1.35
PUDP-201ENST00000381077 A0A1B0GU33 70 aa6.59□□□□□ -1.35
PUDP-201ENST00000381077 HSPG2P98160 4391 aa6.59□□□□□ -1.36
PUDP-201ENST00000381077 H1FX-AS1Q4G0G2 97 aa6.58□□□□□ -1.36
PUDP-201ENST00000381077 RBM12B-AS1Q9P1G2 102 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms