RNA–Protein interactions for RNA: ENST00000380962.9

LCMT1-201, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 1,529 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-201ENST00000380962 SPANXA2-OT1Q8N9U9 137 aa7.86□□□□□ -1.15
LCMT1-201ENST00000380962 KRTAP17-1Q9BYP8 105 aa7.86□□□□□ -1.15
LCMT1-201ENST00000380962 LINC00208Q96KT6 92 aa7.85□□□□□ -1.15
LCMT1-201ENST00000380962 IGHV6-1A0A0B4J1U7 121 aa7.83□□□□□ -1.16
LCMT1-201ENST00000380962 MRPL34Q9BQ48 92 aaKnown RBP7.83□□□□□ -1.16
LCMT1-201ENST00000380962 C8orf87E5RJ46 101 aa7.82□□□□□ -1.16
LCMT1-201ENST00000380962 C1orf64Q8NEQ6 169 aa7.81□□□□□ -1.16
LCMT1-201ENST00000380962 SACSQ9NZJ4 4579 aa7.81□□□□□ -1.16
LCMT1-201ENST00000380962 FAT2Q9NYQ8 4349 aa7.8□□□□□ -1.16
LCMT1-201ENST00000380962 LINC00336Q6ZUF6 198 aa7.8□□□□□ -1.16
LCMT1-201ENST00000380962 PKD1P98161 4303 aa7.79□□□□□ -1.16
LCMT1-201ENST00000380962 C4orf26Q17RF5 130 aa7.78□□□□□ -1.16
LCMT1-201ENST00000380962 FP248Q71RG6 208 aaPredicted RBP7.78□□□□□ -1.16
LCMT1-201ENST00000380962 KRTAP13-2Q52LG2 175 aa7.78□□□□□ -1.16
LCMT1-201ENST00000380962 A0A087X002 238 aa7.76□□□□□ -1.17
LCMT1-201ENST00000380962 KRTAP1-4P0C5Y4 121 aa7.76□□□□□ -1.17
LCMT1-201ENST00000380962 LIMD2Q9BT23 127 aa7.76□□□□□ -1.17
LCMT1-201ENST00000380962 SPINK6Q6UWN8 80 aa7.73□□□□□ -1.17
LCMT1-201ENST00000380962 NDUFS5O43920 106 aa7.73□□□□□ -1.17
LCMT1-201ENST00000380962 LRP1BQ9NZR2 4599 aa7.72□□□□□ -1.17
LCMT1-201ENST00000380962 IGLV7-46A0A075B6I9 117 aa7.72□□□□□ -1.17
LCMT1-201ENST00000380962 NOTCH2NLQ7Z3S9 236 aa7.72□□□□□ -1.17
LCMT1-201ENST00000380962 C1orf195Q5TG92 126 aa7.71□□□□□ -1.18
LCMT1-201ENST00000380962 HYDINQ4G0P3 5121 aa7.7□□□□□ -1.18
LCMT1-201ENST00000380962 LOC101927531A0A1B0GV80 90 aa7.69□□□□□ -1.18
LCMT1-201ENST00000380962 LINC00313P59037 77 aa7.68□□□□□ -1.18
LCMT1-201ENST00000380962 RPS29P62273 56 aaKnown RBP7.68□□□□□ -1.18
LCMT1-201ENST00000380962 Q1T7F1 81 aa7.68□□□□□ -1.18
LCMT1-201ENST00000380962 V9GYY9 64 aa7.68□□□□□ -1.18
LCMT1-201ENST00000380962 SPINK1P00995 79 aa7.67□□□□□ -1.18
LCMT1-201ENST00000380962 PLA2G1BP04054 148 aaKnown RBP7.67□□□□□ -1.18
LCMT1-201ENST00000380962 KRTAP13-3Q3SY46 172 aa7.67□□□□□ -1.18
LCMT1-201ENST00000380962 C4orf48Q5BLP8 95 aa7.67□□□□□ -1.18
LCMT1-201ENST00000380962 Q8N9P0 234 aaPredicted RBP7.67□□□□□ -1.18
LCMT1-201ENST00000380962 PRR4Q16378 134 aa7.66□□□□□ -1.18
LCMT1-201ENST00000380962 TYMSOSQ8TAI1 123 aa7.65□□□□□ -1.18
LCMT1-201ENST00000380962 PCLOQ9Y6V0 5065 aa7.65□□□□□ -1.19
LCMT1-201ENST00000380962 A0A1B0GVY2 172 aa7.64□□□□□ -1.19
LCMT1-201ENST00000380962 FAM229AH3BQW9 127 aa7.63□□□□□ -1.19
LCMT1-201ENST00000380962 SPAG11AQ6PDA7 123 aa7.63□□□□□ -1.19
LCMT1-201ENST00000380962 VPS13BQ7Z7G8 4022 aa7.63□□□□□ -1.19
LCMT1-201ENST00000380962 PCOTHQ58A44 107 aa7.61□□□□□ -1.19
LCMT1-201ENST00000380962 MPLKIPQ8TAP9 179 aa7.61□□□□□ -1.19
LCMT1-201ENST00000380962 HERC2O95714 4834 aa7.6□□□□□ -1.19
LCMT1-201ENST00000380962 SEC61GP60059 68 aa7.59□□□□□ -1.19
LCMT1-201ENST00000380962 Q5W150 140 aa7.59□□□□□ -1.19
LCMT1-201ENST00000380962 KRTAP16-1A8MUX0 517 aa7.58□□□□□ -1.2
LCMT1-201ENST00000380962 COA5Q86WW8 74 aa7.57□□□□□ -1.2
LCMT1-201ENST00000380962 DYNC1H1Q14204 4646 aaKnown RBP7.57□□□□□ -1.2
LCMT1-201ENST00000380962 LINC00304Q8N9R0 145 aa7.57□□□□□ -1.2
LCMT1-201ENST00000380962 KRTAP10-4P60372 401 aaPredicted RBP7.52□□□□□ -1.2
LCMT1-201ENST00000380962 IGKV2-30P06310 120 aa7.52□□□□□ -1.21
LCMT1-201ENST00000380962 PRR26Q8N8Z3 221 aa7.52□□□□□ -1.21
LCMT1-201ENST00000380962 BRK1Q8WUW1 75 aa7.52□□□□□ -1.21
LCMT1-201ENST00000380962 PKHD1P08F94 4074 aa7.52□□□□□ -1.21
LCMT1-201ENST00000380962 RYR1P21817 5038 aa7.5□□□□□ -1.21
LCMT1-201ENST00000380962 SMR3BP02814 79 aaPredicted RBP7.47□□□□□ -1.21
LCMT1-201ENST00000380962 HRES1P13985 223 aa7.47□□□□□ -1.21
LCMT1-201ENST00000380962 ACYP2P14621 99 aa7.47□□□□□ -1.21
LCMT1-201ENST00000380962 APOBP04114 4563 aaKnown RBP7.46□□□□□ -1.21
LCMT1-201ENST00000380962 DMAC1Q96GE9 116 aa7.46□□□□□ -1.22
LCMT1-201ENST00000380962 PMAIP1Q13794 54 aa7.45□□□□□ -1.22
LCMT1-201ENST00000380962 KIAA1109Q2LD37 5005 aa7.44□□□□□ -1.22
LCMT1-201ENST00000380962 LINC01558Q9Y6Z2 57 aa7.42□□□□□ -1.22
LCMT1-201ENST00000380962 A8MUN3 132 aa7.42□□□□□ -1.22
LCMT1-201ENST00000380962 PSPHP1O15172 72 aa7.42□□□□□ -1.22
LCMT1-201ENST00000380962 PKHD1L1Q86WI1 4243 aa7.41□□□□□ -1.22
LCMT1-201ENST00000380962 Q5VV11 94 aa7.41□□□□□ -1.22
LCMT1-201ENST00000380962 Q75L30 129 aa7.38□□□□□ -1.23
LCMT1-201ENST00000380962 RETNLBQ9BQ08 111 aa7.37□□□□□ -1.23
LCMT1-201ENST00000380962 C20orf166-AS1Q96NR2 134 aa7.37□□□□□ -1.23
LCMT1-201ENST00000380962 PRR15LQ9BU68 103 aa7.37□□□□□ -1.23
LCMT1-201ENST00000380962 A8MUU9 505 aa7.36□□□□□ -1.23
LCMT1-201ENST00000380962 C7orf65Q6ZTY9 151 aa7.36□□□□□ -1.23
LCMT1-201ENST00000380962 FAT1Q14517 4588 aa7.35□□□□□ -1.23
LCMT1-201ENST00000380962 IGKV2D-30A0A075B6S6 120 aa7.34□□□□□ -1.23
LCMT1-201ENST00000380962 CHKB-CPT1BH3BT56 60 aa7.32□□□□□ -1.24
LCMT1-201ENST00000380962 ABCA13Q86UQ4 5058 aa7.32□□□□□ -1.24
LCMT1-201ENST00000380962 KRTAP10-8P60410 259 aa7.27□□□□□ -1.25
LCMT1-201ENST00000380962 Q5VSD8 79 aa7.24□□□□□ -1.25
LCMT1-201ENST00000380962 C9orf92A6NGG3 77 aa7.23□□□□□ -1.25
LCMT1-201ENST00000380962 A6NED7 52 aa7.22□□□□□ -1.25
LCMT1-201ENST00000380962 KRTAP4-5Q9BYR2 181 aa7.22□□□□□ -1.25
LCMT1-201ENST00000380962 FLG2Q5D862 2391 aaPredicted RBP7.22□□□□□ -1.25
LCMT1-201ENST00000380962 KTN1-AS1Q86SY8 53 aa7.22□□□□□ -1.25
LCMT1-201ENST00000380962 Q8N1X5 172 aa7.21□□□□□ -1.26
LCMT1-201ENST00000380962 CDC42SE1Q9NRR8 79 aa7.21□□□□□ -1.26
LCMT1-201ENST00000380962 ATP11AUNQ6ZP68 121 aa7.2□□□□□ -1.26
LCMT1-201ENST00000380962 SPTSSBQ8NFR3 76 aa7.17□□□□□ -1.26
LCMT1-201ENST00000380962 HSPG2P98160 4391 aa7.16□□□□□ -1.26
LCMT1-201ENST00000380962 LCA10Q71F78 164 aa7.16□□□□□ -1.26
LCMT1-201ENST00000380962 A0A1B0GU69 56 aa7.15□□□□□ -1.27
LCMT1-201ENST00000380962 TNXBP22105 4242 aa7.14□□□□□ -1.27
LCMT1-201ENST00000380962 SPINK7P58062 85 aa7.13□□□□□ -1.27
LCMT1-201ENST00000380962 FAT3Q8TDW7 4589 aa7.12□□□□□ -1.27
LCMT1-201ENST00000380962 HERC1Q15751 4861 aa7.09□□□□□ -1.27
LCMT1-201ENST00000380962 A8MU10 97 aa7.08□□□□□ -1.28
LCMT1-201ENST00000380962 RPL37P61927 97 aaKnown RBP7.06□□□□□ -1.28
LCMT1-201ENST00000380962 COX6B2Q6YFQ2 88 aa7.05□□□□□ -1.28
LCMT1-201ENST00000380962 LRP1Q07954 4544 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms