RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 Q6ZSA8 131 aa6.83□□□□□ -1.32
SMAD9-202ENST00000379826 A0A087X002 238 aa6.82□□□□□ -1.32
SMAD9-202ENST00000379826 NOTCH2NLQ7Z3S9 236 aa6.82□□□□□ -1.32
SMAD9-202ENST00000379826 RBM12B-AS1Q9P1G2 102 aa6.82□□□□□ -1.32
SMAD9-202ENST00000379826 NOTCH1P46531 2555 aa6.81□□□□□ -1.32
SMAD9-202ENST00000379826 PDZD2O15018 2839 aa6.81□□□□□ -1.32
SMAD9-202ENST00000379826 TRRAPQ9Y4A5 3859 aa6.81□□□□□ -1.32
SMAD9-202ENST00000379826 LCA10Q71F78 164 aa6.8□□□□□ -1.32
SMAD9-202ENST00000379826 MIR22HGQ0VDD5 57 aa6.8□□□□□ -1.32
SMAD9-202ENST00000379826 TENM4Q6N022 2769 aa6.79□□□□□ -1.32
SMAD9-202ENST00000379826 SSBP3-AS1Q7Z2R9 100 aa6.78□□□□□ -1.32
SMAD9-202ENST00000379826 VWFP04275 2813 aa6.78□□□□□ -1.32
SMAD9-202ENST00000379826 UQCR11O14957 56 aa6.76□□□□□ -1.33
SMAD9-202ENST00000379826 Q8N1X5 172 aa6.76□□□□□ -1.33
SMAD9-202ENST00000379826 Q6ZR54 194 aa6.76□□□□□ -1.33
SMAD9-202ENST00000379826 LINC00483Q53H64 154 aa6.75□□□□□ -1.33
SMAD9-202ENST00000379826 PRAC1Q96KF2 57 aa6.75□□□□□ -1.33
SMAD9-202ENST00000379826 PLAC8Q9NZF1 115 aa6.75□□□□□ -1.33
SMAD9-202ENST00000379826 Q5W150 140 aa6.74□□□□□ -1.33
SMAD9-202ENST00000379826 SEC61BP60468 96 aaKnown RBP6.73□□□□□ -1.33
SMAD9-202ENST00000379826 NSD1Q96L73 2696 aaPredicted RBP6.73□□□□□ -1.33
SMAD9-202ENST00000379826 TENM1Q9UKZ4 2725 aa6.73□□□□□ -1.33
SMAD9-202ENST00000379826 NBEAL1Q6ZS30 2694 aa6.73□□□□□ -1.33
SMAD9-202ENST00000379826 KRTAP10-1P60331 282 aa6.7□□□□□ -1.34
SMAD9-202ENST00000379826 KRTAP10-2P60368 255 aa6.7□□□□□ -1.34
SMAD9-202ENST00000379826 KRTAP13-1Q8IUC0 172 aa6.69□□□□□ -1.34
SMAD9-202ENST00000379826 Q6ZRN7 208 aaPredicted RBP6.67□□□□□ -1.34
SMAD9-202ENST00000379826 TENM3Q9P273 2699 aa6.67□□□□□ -1.34
SMAD9-202ENST00000379826 A6NN06 94 aa6.64□□□□□ -1.35
SMAD9-202ENST00000379826 PKD1L1Q8TDX9 2849 aa6.61□□□□□ -1.35
SMAD9-202ENST00000379826 DMAC1Q96GE9 116 aa6.61□□□□□ -1.35
SMAD9-202ENST00000379826 SPINT4Q6UDR6 99 aa6.6□□□□□ -1.35
SMAD9-202ENST00000379826 KMT2BQ9UMN6 2715 aaPredicted RBP6.59□□□□□ -1.35
SMAD9-202ENST00000379826 OTOGQ6ZRI0 2925 aa6.58□□□□□ -1.36
SMAD9-202ENST00000379826 ADM2Q7Z4H4 148 aa6.55□□□□□ -1.36
SMAD9-202ENST00000379826 CSAG1Q6PB30 78 aa6.53□□□□□ -1.36
SMAD9-202ENST00000379826 CSMD3Q7Z407 3707 aa6.52□□□□□ -1.37
SMAD9-202ENST00000379826 HUWE1Q7Z6Z7 4374 aaKnown RBP6.52□□□□□ -1.37
SMAD9-202ENST00000379826 ASB16-AS1Q495Z4 193 aa6.51□□□□□ -1.37
SMAD9-202ENST00000379826 LINC01554Q52M75 96 aa6.5□□□□□ -1.37
SMAD9-202ENST00000379826 KRTAP13-2Q52LG2 175 aa6.49□□□□□ -1.37
SMAD9-202ENST00000379826 FBN1P35555 2871 aaKnown RBP6.47□□□□□ -1.37
SMAD9-202ENST00000379826 A0A0D9SG42 100 aa6.47□□□□□ -1.37
SMAD9-202ENST00000379826 A0A1B0GU33 70 aa6.46□□□□□ -1.38
SMAD9-202ENST00000379826 SPATA8Q6RVD6 105 aa6.45□□□□□ -1.38
SMAD9-202ENST00000379826 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
SMAD9-202ENST00000379826 STAB2Q8WWQ8 2551 aa6.44□□□□□ -1.38
SMAD9-202ENST00000379826 DNAH10Q8IVF4 4471 aa6.43□□□□□ -1.38
SMAD9-202ENST00000379826 SRRM2Q9UQ35 2752 aaKnown RBP6.38□□□□□ -1.39
SMAD9-202ENST00000379826 ANK2Q01484 3957 aa6.36□□□□□ -1.39
SMAD9-202ENST00000379826 CMYA5Q8N3K9 4069 aa6.34□□□□□ -1.39
SMAD9-202ENST00000379826 DMBT1Q9UGM3 2413 aaPredicted RBP6.34□□□□□ -1.39
SMAD9-202ENST00000379826 H1FX-AS1Q4G0G2 97 aa6.33□□□□□ -1.4
SMAD9-202ENST00000379826 H3BS24 57 aa6.32□□□□□ -1.4
SMAD9-202ENST00000379826 DNAH1Q9P2D7 4330 aa6.31□□□□□ -1.4
SMAD9-202ENST00000379826 KRTAP13-3Q3SY46 172 aa6.31□□□□□ -1.4
SMAD9-202ENST00000379826 KRTAP16-1A8MUX0 517 aa6.28□□□□□ -1.4
SMAD9-202ENST00000379826 LYSTQ99698 3801 aa6.28□□□□□ -1.4
SMAD9-202ENST00000379826 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
SMAD9-202ENST00000379826 S4R3F8 94 aa6.22□□□□□ -1.41
SMAD9-202ENST00000379826 TENM2Q9NT68 2774 aa6.21□□□□□ -1.42
SMAD9-202ENST00000379826 DNAH9Q9NYC9 4486 aa6.21□□□□□ -1.42
SMAD9-202ENST00000379826 KRTAP25-1Q3LHN0 102 aa6.19□□□□□ -1.42
SMAD9-202ENST00000379826 LUZP6Q538Z0 58 aa6.18□□□□□ -1.42
SMAD9-202ENST00000379826 CAMK2N1Q7Z7J9 78 aa6.18□□□□□ -1.42
SMAD9-202ENST00000379826 FLG2Q5D862 2391 aaPredicted RBP6.17□□□□□ -1.42
SMAD9-202ENST00000379826 PLECQ15149 4684 aaKnown RBP6.17□□□□□ -1.42
SMAD9-202ENST00000379826 ROMO1P60602 79 aa6.17□□□□□ -1.42
SMAD9-202ENST00000379826 H0YAA0 97 aa6.17□□□□□ -1.42
SMAD9-202ENST00000379826 TGP01266 2768 aa6.16□□□□□ -1.42
SMAD9-202ENST00000379826 DNAH3Q8TD57 4116 aa6.16□□□□□ -1.42
SMAD9-202ENST00000379826 PLAC4Q8WY50 150 aa6.16□□□□□ -1.42
SMAD9-202ENST00000379826 FRAS1Q86XX4 4008 aa6.15□□□□□ -1.43
SMAD9-202ENST00000379826 RPL37P61927 97 aaKnown RBP6.14□□□□□ -1.43
SMAD9-202ENST00000379826 RPS29P62273 56 aaKnown RBP6.13□□□□□ -1.43
SMAD9-202ENST00000379826 COL7A1Q02388 2944 aa6.12□□□□□ -1.43
SMAD9-202ENST00000379826 A8MUU9 505 aa6.1□□□□□ -1.43
SMAD9-202ENST00000379826 DNAH7Q8WXX0 4024 aa6.09□□□□□ -1.43
SMAD9-202ENST00000379826 C20orf166-AS1Q96NR2 134 aa6.09□□□□□ -1.44
SMAD9-202ENST00000379826 DNAH8Q96JB1 4490 aa6.05□□□□□ -1.44
SMAD9-202ENST00000379826 R4GN34 69 aa6.02□□□□□ -1.45
SMAD9-202ENST00000379826 FBN3Q75N90 2809 aa6.01□□□□□ -1.45
SMAD9-202ENST00000379826 STARD9Q9P2P6 4700 aa6□□□□□ -1.45
SMAD9-202ENST00000379826 MEGF8Q7Z7M0 2845 aa6□□□□□ -1.45
SMAD9-202ENST00000379826 A0A0A0MQY5 61 aa6□□□□□ -1.45
SMAD9-202ENST00000379826 A0A1B0GVY2 172 aa5.99□□□□□ -1.45
SMAD9-202ENST00000379826 ALMS1Q8TCU4 4167 aa5.99□□□□□ -1.45
SMAD9-202ENST00000379826 KMT2AQ03164 3969 aa5.98□□□□□ -1.45
SMAD9-202ENST00000379826 VPS13DQ5THJ4 4388 aa5.98□□□□□ -1.45
SMAD9-202ENST00000379826 DNAH17Q9UFH2 4485 aa5.97□□□□□ -1.45
SMAD9-202ENST00000379826 C10orf95Q9H7T3 257 aa5.96□□□□□ -1.46
SMAD9-202ENST00000379826 DYNC2H1Q8NCM8 4307 aaKnown RBP5.96□□□□□ -1.46
SMAD9-202ENST00000379826 KRTAP3-1Q9BYR8 98 aa5.95□□□□□ -1.46
SMAD9-202ENST00000379826 HECTD4Q9Y4D8 3996 aa5.95□□□□□ -1.46
SMAD9-202ENST00000379826 DNAH2Q9P225 4427 aa5.94□□□□□ -1.46
SMAD9-202ENST00000379826 DNAH11Q96DT5 4516 aa5.92□□□□□ -1.46
SMAD9-202ENST00000379826 M0QZ58 72 aa5.92□□□□□ -1.46
SMAD9-202ENST00000379826 XP32Q5T750 250 aa5.87□□□□□ -1.47
SMAD9-202ENST00000379826 TPRXLQ17RH7 258 aa5.84□□□□□ -1.47
SMAD9-202ENST00000379826 DNAH6Q9C0G6 4158 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms